RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 TONSLQ96HA7 1378 aa25.51■■□□□ 1.67
SHKBP1-224ENST00000600718 TSPOAP1O95153 1857 aa25.51■■□□□ 1.67
SHKBP1-224ENST00000600718 RICTORQ6R327 1708 aa25.5■■□□□ 1.67
SHKBP1-224ENST00000600718 A2MP01023 1474 aa25.49■■□□□ 1.67
SHKBP1-224ENST00000600718 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
SHKBP1-224ENST00000600718 EIF2AK4Q9P2K8 1649 aaKnown RBP25.48■■□□□ 1.67
SHKBP1-224ENST00000600718 KIF3BO15066 747 aa25.45■■□□□ 1.67
SHKBP1-224ENST00000600718 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
SHKBP1-224ENST00000600718 RPRD2Q5VT52 1461 aaKnown RBP25.44■■□□□ 1.66
SHKBP1-224ENST00000600718 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
SHKBP1-224ENST00000600718 FRMPD1Q5SYB0 1578 aa25.43■■□□□ 1.66
SHKBP1-224ENST00000600718 KANK1Q14678 1352 aa25.42■■□□□ 1.66
SHKBP1-224ENST00000600718 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
SHKBP1-224ENST00000600718 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
SHKBP1-224ENST00000600718 DIP2CQ9Y2E4 1556 aa25.38■■□□□ 1.65
SHKBP1-224ENST00000600718 VWDEQ8N2E2 1590 aa25.36■■□□□ 1.65
SHKBP1-224ENST00000600718 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
SHKBP1-224ENST00000600718 PRDM15P57071 1507 aaPredicted RBP25.36■■□□□ 1.65
SHKBP1-224ENST00000600718 YEATS2Q9ULM3 1422 aa25.35■■□□□ 1.65
SHKBP1-224ENST00000600718 BCORL1Q5H9F3 1711 aa25.34■■□□□ 1.65
SHKBP1-224ENST00000600718 MROH1Q8NDA8 1641 aa25.33■■□□□ 1.65
SHKBP1-224ENST00000600718 RNF17Q9BXT8 1623 aaKnown RBP25.33■■□□□ 1.65
SHKBP1-224ENST00000600718 L3MBTL2Q969R5 705 aa25.33■■□□□ 1.64
SHKBP1-224ENST00000600718 ATP10AO60312 1499 aa25.3■■□□□ 1.64
SHKBP1-224ENST00000600718 COL17A1Q9UMD9 1497 aaPredicted RBP25.3■■□□□ 1.64
SHKBP1-224ENST00000600718 TET3O43151 1660 aa25.29■■□□□ 1.64
SHKBP1-224ENST00000600718 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
SHKBP1-224ENST00000600718 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
SHKBP1-224ENST00000600718 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
SHKBP1-224ENST00000600718 GGT6Q6P531 493 aa25.26■■□□□ 1.63
SHKBP1-224ENST00000600718 CCDC144AA2RUR9 1427 aa25.26■■□□□ 1.63
SHKBP1-224ENST00000600718 E9PCH4 1651 aa25.24■■□□□ 1.63
SHKBP1-224ENST00000600718 REREQ9P2R6 1566 aa25.23■■□□□ 1.63
SHKBP1-224ENST00000600718 PTPRTO14522 1441 aa25.21■■□□□ 1.63
SHKBP1-224ENST00000600718 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
SHKBP1-224ENST00000600718 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
SHKBP1-224ENST00000600718 AGLP35573 1532 aa25.17■■□□□ 1.62
SHKBP1-224ENST00000600718 TRPM2O94759 1503 aa25.16■■□□□ 1.62
SHKBP1-224ENST00000600718 ABCC3O15438 1527 aa25.16■■□□□ 1.62
SHKBP1-224ENST00000600718 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
SHKBP1-224ENST00000600718 CEP152O94986 1710 aa25.15■■□□□ 1.62
SHKBP1-224ENST00000600718 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.61
SHKBP1-224ENST00000600718 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
SHKBP1-224ENST00000600718 NBPF8Q3BBV2 869 aa25.11■■□□□ 1.61
SHKBP1-224ENST00000600718 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
SHKBP1-224ENST00000600718 NPATQ14207 1427 aa25.09■■□□□ 1.61
SHKBP1-224ENST00000600718 UHRF1BP1Q6BDS2 1440 aa25.08■■□□□ 1.61
SHKBP1-224ENST00000600718 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
SHKBP1-224ENST00000600718 DCAF11Q8TEB1 546 aa25.07■■□□□ 1.6
SHKBP1-224ENST00000600718 CAMSAP1Q5T5Y3 1602 aa25.06■■□□□ 1.6
SHKBP1-224ENST00000600718 RGL3Q3MIN7 710 aa25.06■■□□□ 1.6
SHKBP1-224ENST00000600718 SPATA31E1Q6ZUB1 1445 aa25.05■■□□□ 1.6
SHKBP1-224ENST00000600718 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
SHKBP1-224ENST00000600718 DIEXFQ68CQ4 756 aaKnown RBP25.04■■□□□ 1.6
SHKBP1-224ENST00000600718 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
SHKBP1-224ENST00000600718 CNTLNQ9NXG0 1405 aa25.03■■□□□ 1.6
SHKBP1-224ENST00000600718 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
SHKBP1-224ENST00000600718 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
SHKBP1-224ENST00000600718 ZNF326Q5BKZ1 582 aaKnown RBP25■■□□□ 1.59
SHKBP1-224ENST00000600718 STAC3Q96MF2 364 aa25■■□□□ 1.59
SHKBP1-224ENST00000600718 NOS1P29475 1434 aa24.99■■□□□ 1.59
SHKBP1-224ENST00000600718 EIF4G2P78344 907 aaKnown RBP eCLIP24.98■■□□□ 1.59
SHKBP1-224ENST00000600718 MLECQ14165 292 aa24.94■■□□□ 1.58
SHKBP1-224ENST00000600718 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
SHKBP1-224ENST00000600718 UGGT1Q9NYU2 1555 aa24.94■■□□□ 1.58
SHKBP1-224ENST00000600718 PRAG1Q86YV5 1406 aa24.94■■□□□ 1.58
SHKBP1-224ENST00000600718 HSPA5P11021 654 aaKnown RBP24.93■■□□□ 1.58
SHKBP1-224ENST00000600718 ARID4BQ4LE39 1312 aaPredicted RBP24.93■■□□□ 1.58
SHKBP1-224ENST00000600718 HIRIP3Q9BW71 556 aaPredicted RBP24.92■■□□□ 1.58
SHKBP1-224ENST00000600718 KIF1BO60333 1816 aa24.91■■□□□ 1.58
SHKBP1-224ENST00000600718 ESF1Q9H501 851 aaKnown RBP24.9■■□□□ 1.58
SHKBP1-224ENST00000600718 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
SHKBP1-224ENST00000600718 CFAP65Q6ZU64 1925 aaKnown RBP24.89■■□□□ 1.57
SHKBP1-224ENST00000600718 CLTCQ00610 1675 aaKnown RBP24.88■■□□□ 1.57
SHKBP1-224ENST00000600718 SYNMO15061 1565 aa24.88■■□□□ 1.57
SHKBP1-224ENST00000600718 PIK3C2BO00750 1634 aa24.87■■□□□ 1.57
SHKBP1-224ENST00000600718 PREX1Q8TCU6 1659 aa24.87■■□□□ 1.57
SHKBP1-224ENST00000600718 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
SHKBP1-224ENST00000600718 CHGAP10645 457 aaKnown RBP24.85■■□□□ 1.57
SHKBP1-224ENST00000600718 CARD11Q9BXL7 1154 aa24.85■■□□□ 1.57
SHKBP1-224ENST00000600718 ERVK-7P63135 1459 aa24.84■■□□□ 1.57
SHKBP1-224ENST00000600718 TRPM1Q7Z4N2 1603 aa24.84■■□□□ 1.57
SHKBP1-224ENST00000600718 ROCK2O75116 1388 aaKnown RBP24.84■■□□□ 1.57
SHKBP1-224ENST00000600718 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
SHKBP1-224ENST00000600718 RPGRIP1LQ68CZ1 1315 aa24.83■■□□□ 1.57
SHKBP1-224ENST00000600718 IDI1Q13907 227 aa24.83■■□□□ 1.57
SHKBP1-224ENST00000600718 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
SHKBP1-224ENST00000600718 USP47Q96K76 1375 aa24.81■■□□□ 1.56
SHKBP1-224ENST00000600718 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
SHKBP1-224ENST00000600718 MROH2AA6NES4 1674 aa24.81■■□□□ 1.56
SHKBP1-224ENST00000600718 MYOM2P54296 1465 aa24.8■■□□□ 1.56
SHKBP1-224ENST00000600718 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
SHKBP1-224ENST00000600718 MADDQ8WXG6 1647 aa24.79■■□□□ 1.56
SHKBP1-224ENST00000600718 SPATA31D1Q6ZQQ2 1576 aa24.78■■□□□ 1.56
SHKBP1-224ENST00000600718 NBPF1Q3BBV0 1214 aa24.77■■□□□ 1.56
SHKBP1-224ENST00000600718 IFT172Q9UG01 1749 aa24.76■■□□□ 1.55
SHKBP1-224ENST00000600718 LAMC1P11047 1609 aa24.75■■□□□ 1.55
SHKBP1-224ENST00000600718 ADGRF5Q8IZF2 1346 aa24.73■■□□□ 1.55
SHKBP1-224ENST00000600718 NRXN1Q9ULB1 1477 aa24.73■■□□□ 1.55
SHKBP1-224ENST00000600718 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms