RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 EIF2AK4Q9P2K8 1649 aaKnown RBP19.68■□□□□ 0.74
SRRM1-223ENST00000600523 ROCK1Q13464 1354 aa19.68■□□□□ 0.74
SRRM1-223ENST00000600523 WASHC2CQ9Y4E1 1318 aa19.66■□□□□ 0.74
SRRM1-223ENST00000600523 KANK1Q14678 1352 aa19.64■□□□□ 0.73
SRRM1-223ENST00000600523 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
SRRM1-223ENST00000600523 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
SRRM1-223ENST00000600523 PTPRKQ15262 1439 aa19.62■□□□□ 0.73
SRRM1-223ENST00000600523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.732e-10■■■■□ 20.5
SRRM1-223ENST00000600523 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
SRRM1-223ENST00000600523 KDM5DQ9BY66 1539 aa19.6■□□□□ 0.73
SRRM1-223ENST00000600523 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
SRRM1-223ENST00000600523 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
SRRM1-223ENST00000600523 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
SRRM1-223ENST00000600523 CLTCQ00610 1675 aaKnown RBP19.58■□□□□ 0.72
SRRM1-223ENST00000600523 ZC3H13Q5T200 1668 aaKnown RBP19.55■□□□□ 0.72
SRRM1-223ENST00000600523 C3P01024 1663 aa19.53■□□□□ 0.72
SRRM1-223ENST00000600523 PRDM15P57071 1507 aaPredicted RBP19.53■□□□□ 0.72
SRRM1-223ENST00000600523 NPATQ14207 1427 aa19.52■□□□□ 0.72
SRRM1-223ENST00000600523 ABCC3O15438 1527 aa19.51■□□□□ 0.71
SRRM1-223ENST00000600523 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
SRRM1-223ENST00000600523 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
SRRM1-223ENST00000600523 UHRF1BP1Q6BDS2 1440 aa19.49■□□□□ 0.71
SRRM1-223ENST00000600523 PZPP20742 1482 aa19.48■□□□□ 0.71
SRRM1-223ENST00000600523 MROH1Q8NDA8 1641 aa19.48■□□□□ 0.71
SRRM1-223ENST00000600523 NAIPQ13075 1403 aa19.47■□□□□ 0.71
SRRM1-223ENST00000600523 ACIN1Q9UKV3 1341 aaKnown RBP19.47■□□□□ 0.71
SRRM1-223ENST00000600523 SETD1BQ9UPS6 1966 aaKnown RBP19.46■□□□□ 0.71
SRRM1-223ENST00000600523 NUP155O75694 1391 aa19.45■□□□□ 0.7
SRRM1-223ENST00000600523 GCC2Q8IWJ2 1684 aa19.45■□□□□ 0.7
SRRM1-223ENST00000600523 PREX1Q8TCU6 1659 aa19.45■□□□□ 0.7
SRRM1-223ENST00000600523 CAMSAP1Q5T5Y3 1602 aa19.44■□□□□ 0.7
SRRM1-223ENST00000600523 CEP152O94986 1710 aa19.44■□□□□ 0.7
SRRM1-223ENST00000600523 UNC13BO14795 1591 aa19.44■□□□□ 0.7
SRRM1-223ENST00000600523 TNRQ92752 1358 aa19.44■□□□□ 0.7
SRRM1-223ENST00000600523 ARHGAP31Q2M1Z3 1444 aa19.43■□□□□ 0.7
SRRM1-223ENST00000600523 LMTK2Q8IWU2 1503 aa19.43■□□□□ 0.7
SRRM1-223ENST00000600523 FBXO31Q5XUX0 539 aaPredicted RBP19.42■□□□□ 0.7
SRRM1-223ENST00000600523 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
SRRM1-223ENST00000600523 VWDEQ8N2E2 1590 aa19.41■□□□□ 0.7
SRRM1-223ENST00000600523 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
SRRM1-223ENST00000600523 EFCAB6Q5THR3 1501 aa19.38■□□□□ 0.69
SRRM1-223ENST00000600523 RPRD2Q5VT52 1461 aaKnown RBP19.38■□□□□ 0.69
SRRM1-223ENST00000600523 ERVK-7P63135 1459 aa19.37■□□□□ 0.69
SRRM1-223ENST00000600523 NLRP1Q9C000 1473 aa19.37■□□□□ 0.69
SRRM1-223ENST00000600523 TET3O43151 1660 aa19.36■□□□□ 0.69
SRRM1-223ENST00000600523 IQGAP3Q86VI3 1631 aa19.36■□□□□ 0.69
SRRM1-223ENST00000600523 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
SRRM1-223ENST00000600523 HSPA2P54652 639 aa19.35■□□□□ 0.69
SRRM1-223ENST00000600523 MYO3AQ8NEV4 1616 aa19.35■□□□□ 0.69
SRRM1-223ENST00000600523 SPATA31D1Q6ZQQ2 1576 aa19.35■□□□□ 0.69
SRRM1-223ENST00000600523 A2ML1A8K2U0 1454 aa19.34■□□□□ 0.69
SRRM1-223ENST00000600523 CEP170BQ9Y4F5 1589 aaPredicted RBP19.33■□□□□ 0.69
SRRM1-223ENST00000600523 STAG3Q9UJ98 1225 aa19.33■□□□□ 0.68
SRRM1-223ENST00000600523 THEMISQ8N1K5 641 aaPredicted RBP19.32■□□□□ 0.68
SRRM1-223ENST00000600523 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
SRRM1-223ENST00000600523 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
SRRM1-223ENST00000600523 DMRT2Q9Y5R5 561 aa19.3■□□□□ 0.68
SRRM1-223ENST00000600523 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
SRRM1-223ENST00000600523 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
SRRM1-223ENST00000600523 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
SRRM1-223ENST00000600523 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.68
SRRM1-223ENST00000600523 TRIM26Q12899 539 aaPredicted RBP19.27■□□□□ 0.68
SRRM1-223ENST00000600523 NOS1P29475 1434 aa19.26■□□□□ 0.67
SRRM1-223ENST00000600523 E9PCH4 1651 aa19.25■□□□□ 0.67
SRRM1-223ENST00000600523 HRCP23327 699 aa19.25■□□□□ 0.67
SRRM1-223ENST00000600523 PKD2Q13563 968 aa19.25■□□□□ 0.67
SRRM1-223ENST00000600523 PLA2R1Q13018 1463 aa19.23■□□□□ 0.67
SRRM1-223ENST00000600523 IDI1Q13907 227 aa19.23■□□□□ 0.67
SRRM1-223ENST00000600523 ANKLE2Q86XL3 938 aa19.22■□□□□ 0.67
SRRM1-223ENST00000600523 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
SRRM1-223ENST00000600523 EID1Q9Y6B2 187 aa19.21■□□□□ 0.67
SRRM1-223ENST00000600523 SYNMO15061 1565 aa19.2■□□□□ 0.66
SRRM1-223ENST00000600523 CHGAP10645 457 aaKnown RBP19.2■□□□□ 0.66
SRRM1-223ENST00000600523 HDGFP51858 240 aaKnown RBP19.2■□□□□ 0.66
SRRM1-223ENST00000600523 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
SRRM1-223ENST00000600523 KDM5AP29375 1690 aaKnown RBP19.17■□□□□ 0.66
SRRM1-223ENST00000600523 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
SRRM1-223ENST00000600523 PTPRTO14522 1441 aa19.17■□□□□ 0.66
SRRM1-223ENST00000600523 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
SRRM1-223ENST00000600523 UBR1Q8IWV7 1749 aa19.16■□□□□ 0.66
SRRM1-223ENST00000600523 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
SRRM1-223ENST00000600523 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
SRRM1-223ENST00000600523 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
SRRM1-223ENST00000600523 TRPM2O94759 1503 aa19.13■□□□□ 0.65
SRRM1-223ENST00000600523 STRCQ7RTU9 1775 aa19.12■□□□□ 0.65
SRRM1-223ENST00000600523 PPP1R15AO75807 674 aaPredicted RBP19.11■□□□□ 0.65
SRRM1-223ENST00000600523 FOXD1Q16676 465 aa19.11■□□□□ 0.65
SRRM1-223ENST00000600523 ZNF326Q5BKZ1 582 aaKnown RBP19.11■□□□□ 0.65
SRRM1-223ENST00000600523 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
SRRM1-223ENST00000600523 SLIT1O75093 1534 aa19.1■□□□□ 0.65
SRRM1-223ENST00000600523 SCAF11Q99590 1463 aaKnown RBP19.1■□□□□ 0.65
SRRM1-223ENST00000600523 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
SRRM1-223ENST00000600523 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
SRRM1-223ENST00000600523 BCANQ96GW7 911 aa19.09■□□□□ 0.65
SRRM1-223ENST00000600523 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
SRRM1-223ENST00000600523 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.64
SRRM1-223ENST00000600523 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
SRRM1-223ENST00000600523 MED14O60244 1454 aa19.05■□□□□ 0.64
SRRM1-223ENST00000600523 CLTCL1P53675 1640 aa19.05■□□□□ 0.64
SRRM1-223ENST00000600523 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms