RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 EIF2AK4Q9P2K8 1649 aaKnown RBP34.12■■■■□ 3.05
SYMPK-212ENST00000598896 DIP2CQ9Y2E4 1556 aa34.11■■■■□ 3.05
SYMPK-212ENST00000598896 A2MP01023 1474 aa34.11■■■■□ 3.05
SYMPK-212ENST00000598896 FAM135AQ9P2D6 1515 aa34.11■■■■□ 3.05
SYMPK-212ENST00000598896 DEPDC5O75140 1603 aa34.09■■■■□ 3.05
SYMPK-212ENST00000598896 IQGAP3Q86VI3 1631 aa34.08■■■■□ 3.05
SYMPK-212ENST00000598896 YEATS2Q9ULM3 1422 aa34.08■■■■□ 3.05
SYMPK-212ENST00000598896 TRHP20396 242 aaPredicted RBP34.05■■■■□ 3.04
SYMPK-212ENST00000598896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.05■■■■□ 3.046e-7■■■□□ 17.2
SYMPK-212ENST00000598896 NEUROD1Q13562 356 aa34.03■■■■□ 3.04
SYMPK-212ENST00000598896 PKD2Q13563 968 aa34.03■■■■□ 3.04
SYMPK-212ENST00000598896 ANKRD30BQ9BXX2 1392 aa34.02■■■■□ 3.04
SYMPK-212ENST00000598896 MROH1Q8NDA8 1641 aa34.01■■■■□ 3.04
SYMPK-212ENST00000598896 KIF3BO15066 747 aa34.01■■■■□ 3.03
SYMPK-212ENST00000598896 PRDM15P57071 1507 aaPredicted RBP33.98■■■■□ 3.03
SYMPK-212ENST00000598896 BCORL1Q5H9F3 1711 aa33.97■■■■□ 3.03
SYMPK-212ENST00000598896 RNF17Q9BXT8 1623 aaKnown RBP33.96■■■■□ 3.03
SYMPK-212ENST00000598896 VWDEQ8N2E2 1590 aa33.95■■■■□ 3.03
SYMPK-212ENST00000598896 ATP10AO60312 1499 aa33.87■■■■□ 3.01
SYMPK-212ENST00000598896 ARHGEF40Q8TER5 1519 aa33.87■■■■□ 3.01
SYMPK-212ENST00000598896 RPRD2Q5VT52 1461 aaKnown RBP33.85■■■■□ 3.01
SYMPK-212ENST00000598896 KANK1Q14678 1352 aa33.85■■■■□ 3.01
SYMPK-212ENST00000598896 REREQ9P2R6 1566 aa33.84■■■■□ 3.01
SYMPK-212ENST00000598896 TET3O43151 1660 aa33.84■■■■□ 3.01
SYMPK-212ENST00000598896 TIMELESSQ9UNS1 1208 aa33.84■■■■□ 3.01
SYMPK-212ENST00000598896 E9PCH4 1651 aa33.83■■■■□ 3.01
SYMPK-212ENST00000598896 TONSLQ96HA7 1378 aa33.82■■■■□ 3
SYMPK-212ENST00000598896 SIGLEC1Q9BZZ2 1709 aa33.81■■■■□ 3
SYMPK-212ENST00000598896 CEP152O94986 1710 aa33.8■■■■□ 3
SYMPK-212ENST00000598896 GGT6Q6P531 493 aa33.79■■■■□ 3
SYMPK-212ENST00000598896 PLA2R1Q13018 1463 aa33.77■■■■□ 3
SYMPK-212ENST00000598896 LMTK2Q8IWU2 1503 aa33.77■■■■□ 3
SYMPK-212ENST00000598896 AGLP35573 1532 aa33.74■■■□□ 2.99
SYMPK-212ENST00000598896 EFCAB6Q5THR3 1501 aa33.74■■■□□ 2.99
SYMPK-212ENST00000598896 ABCC3O15438 1527 aa33.71■■■□□ 2.99
SYMPK-212ENST00000598896 PPP1R15AO75807 674 aaPredicted RBP33.67■■■□□ 2.98
SYMPK-212ENST00000598896 SPHKAPQ2M3C7 1700 aa33.67■■■□□ 2.98
SYMPK-212ENST00000598896 CCDC144AA2RUR9 1427 aa33.65■■■□□ 2.98
SYMPK-212ENST00000598896 WASHC2CQ9Y4E1 1318 aa33.65■■■□□ 2.98
SYMPK-212ENST00000598896 ZC3H13Q5T200 1668 aaKnown RBP33.64■■■□□ 2.98
SYMPK-212ENST00000598896 CAMSAP1Q5T5Y3 1602 aa33.64■■■□□ 2.98
SYMPK-212ENST00000598896 L3MBTL2Q969R5 705 aa33.64■■■□□ 2.98
SYMPK-212ENST00000598896 PTPRTO14522 1441 aa33.63■■■□□ 2.97
SYMPK-212ENST00000598896 TRPM2O94759 1503 aa33.63■■■□□ 2.97
SYMPK-212ENST00000598896 NPATQ14207 1427 aa33.6■■■□□ 2.97
SYMPK-212ENST00000598896 CLTCL1P53675 1640 aa33.54■■■□□ 2.96
SYMPK-212ENST00000598896 CFAP65Q6ZU64 1925 aaKnown RBP33.5■■■□□ 2.95
SYMPK-212ENST00000598896 ARHGAP31Q2M1Z3 1444 aa33.49■■■□□ 2.95
SYMPK-212ENST00000598896 UGGT1Q9NYU2 1555 aa33.49■■■□□ 2.95
SYMPK-212ENST00000598896 MLECQ14165 292 aa33.48■■■□□ 2.95
SYMPK-212ENST00000598896 CLTCQ00610 1675 aaKnown RBP33.47■■■□□ 2.95
SYMPK-212ENST00000598896 PPP6R1Q9UPN7 881 aa33.46■■■□□ 2.95
SYMPK-212ENST00000598896 SPATA31E1Q6ZUB1 1445 aa33.43■■■□□ 2.94
SYMPK-212ENST00000598896 ARID4BQ4LE39 1312 aaPredicted RBP33.43■■■□□ 2.94
SYMPK-212ENST00000598896 NOS1P29475 1434 aa33.43■■■□□ 2.94
SYMPK-212ENST00000598896 CNTLNQ9NXG0 1405 aa33.41■■■□□ 2.94
SYMPK-212ENST00000598896 NBPF8Q3BBV2 869 aa33.4■■■□□ 2.94
SYMPK-212ENST00000598896 SYNMO15061 1565 aa33.39■■■□□ 2.94
SYMPK-212ENST00000598896 RGL3Q3MIN7 710 aa33.39■■■□□ 2.94
SYMPK-212ENST00000598896 PREX1Q8TCU6 1659 aa33.38■■■□□ 2.93
SYMPK-212ENST00000598896 ZNF316A6NFI3 1004 aaPredicted RBP33.35■■■□□ 2.93
SYMPK-212ENST00000598896 DCAF11Q8TEB1 546 aa33.35■■■□□ 2.93
SYMPK-212ENST00000598896 KIF1BO60333 1816 aa33.34■■■□□ 2.93
SYMPK-212ENST00000598896 PIK3C2BO00750 1634 aa33.34■■■□□ 2.93
SYMPK-212ENST00000598896 NEURL4Q96JN8 1562 aa33.33■■■□□ 2.93
SYMPK-212ENST00000598896 UHRF1BP1Q6BDS2 1440 aa33.32■■■□□ 2.93
SYMPK-212ENST00000598896 MROH2AA6NES4 1674 aa33.32■■■□□ 2.92
SYMPK-212ENST00000598896 KDM2AQ9Y2K7 1162 aa33.31■■■□□ 2.92
SYMPK-212ENST00000598896 ERVK-7P63135 1459 aa33.29■■■□□ 2.92
SYMPK-212ENST00000598896 ZNF326Q5BKZ1 582 aaKnown RBP33.28■■■□□ 2.92
SYMPK-212ENST00000598896 FBXO31Q5XUX0 539 aaPredicted RBP33.28■■■□□ 2.92
SYMPK-212ENST00000598896 ADGRB3O60242 1522 aa33.28■■■□□ 2.92
SYMPK-212ENST00000598896 ESF1Q9H501 851 aaKnown RBP33.25■■■□□ 2.91
SYMPK-212ENST00000598896 SPATA31D1Q6ZQQ2 1576 aa33.24■■■□□ 2.91
SYMPK-212ENST00000598896 ZMYM3Q14202 1370 aa33.24■■■□□ 2.91
SYMPK-212ENST00000598896 PRAG1Q86YV5 1406 aa33.23■■■□□ 2.91
SYMPK-212ENST00000598896 RALGAPBQ86X10 1494 aa33.19■■■□□ 2.9
SYMPK-212ENST00000598896 FER1L4A9Z1Z3 1794 aa33.19■■■□□ 2.9
SYMPK-212ENST00000598896 IFT172Q9UG01 1749 aa33.18■■■□□ 2.9
SYMPK-212ENST00000598896 IDI1Q13907 227 aa33.18■■■□□ 2.9
SYMPK-212ENST00000598896 SLC52A1Q9NWF4 448 aa33.16■■■□□ 2.9
SYMPK-212ENST00000598896 TRPM1Q7Z4N2 1603 aa33.16■■■□□ 2.9
SYMPK-212ENST00000598896 CHGAP10645 457 aaKnown RBP33.15■■■□□ 2.9
SYMPK-212ENST00000598896 MADDQ8WXG6 1647 aa33.15■■■□□ 2.9
SYMPK-212ENST00000598896 HIRIP3Q9BW71 556 aaPredicted RBP33.12■■■□□ 2.89
SYMPK-212ENST00000598896 TMEM131LA2VDJ0 1609 aa33.11■■■□□ 2.89
SYMPK-212ENST00000598896 MYO5BQ9ULV0 1848 aa33.11■■■□□ 2.89
SYMPK-212ENST00000598896 MYOM2P54296 1465 aa33.09■■■□□ 2.89
SYMPK-212ENST00000598896 PPLO60437 1756 aa33.09■■■□□ 2.89
SYMPK-212ENST00000598896 C3P01024 1663 aa33.09■■■□□ 2.89
SYMPK-212ENST00000598896 STAC3Q96MF2 364 aa33.07■■■□□ 2.88
SYMPK-212ENST00000598896 HSPA5P11021 654 aaKnown RBP33.04■■■□□ 2.88
SYMPK-212ENST00000598896 EIF4G2P78344 907 aaKnown RBP eCLIP33.03■■■□□ 2.882e-7■■■■■ 34.2
SYMPK-212ENST00000598896 NEXMIFQ5QGS0 1516 aa33.03■■■□□ 2.88
SYMPK-212ENST00000598896 ROCK2O75116 1388 aaKnown RBP33.03■■■□□ 2.88
SYMPK-212ENST00000598896 CEBPAP49715 358 aaPredicted RBP33.02■■■□□ 2.88
SYMPK-212ENST00000598896 ADGRF5Q8IZF2 1346 aa33.01■■■□□ 2.88
SYMPK-212ENST00000598896 NRXN1Q9ULB1 1477 aa33.01■■■□□ 2.88
SYMPK-212ENST00000598896 ADAMTSL3P82987 1691 aa33.01■■■□□ 2.87
SYMPK-212ENST00000598896 NBPF1Q3BBV0 1214 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms