RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ESF1Q9H501 851 aaKnown RBP29.16■■■□□ 2.26
PNKP-207ENST00000596014 PTPRMP28827 1452 aa29.14■■■□□ 2.26
PNKP-207ENST00000596014 NAIPQ13075 1403 aa29.12■■■□□ 2.25
PNKP-207ENST00000596014 MROH1Q8NDA8 1641 aa29.12■■■□□ 2.25
PNKP-207ENST00000596014 CNTLNQ9NXG0 1405 aa29.11■■■□□ 2.25
PNKP-207ENST00000596014 CLTCQ00610 1675 aaKnown RBP29.1■■■□□ 2.25
PNKP-207ENST00000596014 DEPDC5O75140 1603 aa29.1■■■□□ 2.25
PNKP-207ENST00000596014 HFM1A2PYH4 1435 aa29.1■■■□□ 2.25
PNKP-207ENST00000596014 GCC2Q8IWJ2 1684 aa29.09■■■□□ 2.25
PNKP-207ENST00000596014 WASHC2CQ9Y4E1 1318 aa29.09■■■□□ 2.25
PNKP-207ENST00000596014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.08■■■□□ 2.251e-7■■■■□ 24.4
PNKP-207ENST00000596014 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
PNKP-207ENST00000596014 PRDM15P57071 1507 aaPredicted RBP29.06■■■□□ 2.24
PNKP-207ENST00000596014 FAM135AQ9P2D6 1515 aa29.06■■■□□ 2.24
PNKP-207ENST00000596014 KDM5DQ9BY66 1539 aa29.06■■■□□ 2.24
PNKP-207ENST00000596014 MROH2AA6NES4 1674 aa29.06■■■□□ 2.24
PNKP-207ENST00000596014 CEBPAP49715 358 aaPredicted RBP29.04■■■□□ 2.24
PNKP-207ENST00000596014 PLPPR3Q6T4P5 718 aa29.04■■■□□ 2.24
PNKP-207ENST00000596014 ZMYM3Q14202 1370 aa29.04■■■□□ 2.24
PNKP-207ENST00000596014 C3P01024 1663 aa29.02■■■□□ 2.24
PNKP-207ENST00000596014 ABCC3O15438 1527 aa29.02■■■□□ 2.24
PNKP-207ENST00000596014 KANK1Q14678 1352 aa29.02■■■□□ 2.24
PNKP-207ENST00000596014 ZC3H13Q5T200 1668 aaKnown RBP29.01■■■□□ 2.23
PNKP-207ENST00000596014 UNC13BO14795 1591 aa29■■■□□ 2.23
PNKP-207ENST00000596014 CEP152O94986 1710 aa29■■■□□ 2.23
PNKP-207ENST00000596014 VWDEQ8N2E2 1590 aa28.99■■■□□ 2.23
PNKP-207ENST00000596014 NUP155O75694 1391 aa28.93■■■□□ 2.22
PNKP-207ENST00000596014 CAMSAP1Q5T5Y3 1602 aa28.92■■■□□ 2.22
PNKP-207ENST00000596014 LMTK2Q8IWU2 1503 aa28.92■■■□□ 2.22
PNKP-207ENST00000596014 SETD5Q9C0A6 1442 aa28.92■■■□□ 2.22
PNKP-207ENST00000596014 SETD1BQ9UPS6 1966 aaKnown RBP28.9■■■□□ 2.22
PNKP-207ENST00000596014 TRIM26Q12899 539 aaPredicted RBP28.9■■■□□ 2.22
PNKP-207ENST00000596014 PZPP20742 1482 aa28.89■■■□□ 2.22
PNKP-207ENST00000596014 IQGAP3Q86VI3 1631 aa28.88■■■□□ 2.21
PNKP-207ENST00000596014 CFAP65Q6ZU64 1925 aaKnown RBP28.87■■■□□ 2.21
PNKP-207ENST00000596014 FBXO31Q5XUX0 539 aaPredicted RBP28.87■■■□□ 2.21
PNKP-207ENST00000596014 NPATQ14207 1427 aa28.86■■■□□ 2.21
PNKP-207ENST00000596014 ARHGAP31Q2M1Z3 1444 aa28.86■■■□□ 2.21
PNKP-207ENST00000596014 TRIM52Q96A61 297 aa28.85■■■□□ 2.21
PNKP-207ENST00000596014 TET3O43151 1660 aa28.84■■■□□ 2.21
PNKP-207ENST00000596014 EFCAB6Q5THR3 1501 aa28.83■■■□□ 2.21
PNKP-207ENST00000596014 RAB3GAP2Q9H2M9 1393 aa28.83■■■□□ 2.21
PNKP-207ENST00000596014 PREX1Q8TCU6 1659 aa28.77■■■□□ 2.2
PNKP-207ENST00000596014 ACIN1Q9UKV3 1341 aaKnown RBP28.77■■■□□ 2.2
PNKP-207ENST00000596014 ERVK-7P63135 1459 aa28.77■■■□□ 2.2
PNKP-207ENST00000596014 SPATA31D1Q6ZQQ2 1576 aa28.76■■■□□ 2.2
PNKP-207ENST00000596014 E9PCH4 1651 aa28.76■■■□□ 2.19
PNKP-207ENST00000596014 TNRQ92752 1358 aa28.76■■■□□ 2.19
PNKP-207ENST00000596014 RPRD2Q5VT52 1461 aaKnown RBP28.75■■■□□ 2.19
PNKP-207ENST00000596014 HRCP23327 699 aa28.74■■■□□ 2.19
PNKP-207ENST00000596014 UHRF1BP1Q6BDS2 1440 aa28.73■■■□□ 2.19
PNKP-207ENST00000596014 SLC4A1APQ9BWU0 796 aaKnown RBP28.72■■■□□ 2.19
PNKP-207ENST00000596014 LMTK3Q96Q04 1460 aa28.71■■■□□ 2.19
PNKP-207ENST00000596014 MYO3AQ8NEV4 1616 aa28.7■■■□□ 2.19
PNKP-207ENST00000596014 NOS1P29475 1434 aa28.69■■■□□ 2.18
PNKP-207ENST00000596014 MPHOSPH9Q99550 1183 aa28.67■■■□□ 2.18
PNKP-207ENST00000596014 PKD2Q13563 968 aa28.67■■■□□ 2.18
PNKP-207ENST00000596014 NLRP1Q9C000 1473 aa28.65■■■□□ 2.18
PNKP-207ENST00000596014 SYNMO15061 1565 aa28.64■■■□□ 2.18
PNKP-207ENST00000596014 CEP170BQ9Y4F5 1589 aaPredicted RBP28.64■■■□□ 2.17
PNKP-207ENST00000596014 ZNF142P52746 1687 aaPredicted RBP28.63■■■□□ 2.17
PNKP-207ENST00000596014 A2ML1A8K2U0 1454 aa28.62■■■□□ 2.17
PNKP-207ENST00000596014 HSPA2P54652 639 aa28.61■■■□□ 2.17
PNKP-207ENST00000596014 IDI1Q13907 227 aa28.59■■■□□ 2.17
PNKP-207ENST00000596014 SPHKAPQ2M3C7 1700 aa28.59■■■□□ 2.17
PNKP-207ENST00000596014 SLC52A1Q9NWF4 448 aa28.58■■■□□ 2.17
PNKP-207ENST00000596014 PTPRTO14522 1441 aa28.58■■■□□ 2.17
PNKP-207ENST00000596014 FOXD1Q16676 465 aa28.57■■■□□ 2.16
PNKP-207ENST00000596014 UGGT1Q9NYU2 1555 aa28.55■■■□□ 2.16
PNKP-207ENST00000596014 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
PNKP-207ENST00000596014 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
PNKP-207ENST00000596014 PLA2R1Q13018 1463 aa28.52■■■□□ 2.16
PNKP-207ENST00000596014 THEMISQ8N1K5 641 aaPredicted RBP28.51■■■□□ 2.16
PNKP-207ENST00000596014 UBR1Q8IWV7 1749 aa28.51■■■□□ 2.16
PNKP-207ENST00000596014 TRPM2O94759 1503 aa28.5■■■□□ 2.15
PNKP-207ENST00000596014 STAG3Q9UJ98 1225 aa28.48■■■□□ 2.15
PNKP-207ENST00000596014 KDM5AP29375 1690 aaKnown RBP28.47■■■□□ 2.15
PNKP-207ENST00000596014 ADGRB3O60242 1522 aa28.44■■■□□ 2.14
PNKP-207ENST00000596014 CLTCL1P53675 1640 aa28.44■■■□□ 2.14
PNKP-207ENST00000596014 MYO5BQ9ULV0 1848 aa28.42■■■□□ 2.14
PNKP-207ENST00000596014 TMEM131LA2VDJ0 1609 aa28.42■■■□□ 2.14
PNKP-207ENST00000596014 STRCQ7RTU9 1775 aa28.42■■■□□ 2.14
PNKP-207ENST00000596014 CHGAP10645 457 aaKnown RBP28.42■■■□□ 2.14
PNKP-207ENST00000596014 KIF1BO60333 1816 aa28.38■■■□□ 2.13
PNKP-207ENST00000596014 NCKAP5LQ9HCH0 1330 aa28.37■■■□□ 2.13
PNKP-207ENST00000596014 ANKRD30BQ9BXX2 1392 aa28.37■■■□□ 2.13
PNKP-207ENST00000596014 CCDC144AA2RUR9 1427 aa28.37■■■□□ 2.13
PNKP-207ENST00000596014 SLIT1O75093 1534 aa28.36■■■□□ 2.13
PNKP-207ENST00000596014 ANKLE2Q86XL3 938 aa28.36■■■□□ 2.13
PNKP-207ENST00000596014 TMEM2Q9UHN6 1383 aa28.36■■■□□ 2.13
PNKP-207ENST00000596014 ARHGAP23Q9P227 1491 aa28.36■■■□□ 2.13
PNKP-207ENST00000596014 POLR1AO95602 1720 aaPredicted RBP28.33■■■□□ 2.13
PNKP-207ENST00000596014 DHX57Q6P158 1386 aaKnown RBP28.31■■■□□ 2.12
PNKP-207ENST00000596014 LTKP29376 864 aa28.31■■■□□ 2.12
PNKP-207ENST00000596014 TXNDC2Q86VQ3 553 aa28.31■■■□□ 2.12
PNKP-207ENST00000596014 EID1Q9Y6B2 187 aa28.3■■■□□ 2.12
PNKP-207ENST00000596014 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
PNKP-207ENST00000596014 SCAF11Q99590 1463 aaKnown RBP28.28■■■□□ 2.12
PNKP-207ENST00000596014 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
PNKP-207ENST00000596014 NEURL4Q96JN8 1562 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms