RNA–Protein interactions for RNA: ENST00000594527.1

UBA52-203, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 3

Gene UBA52, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-203ENST00000594527 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
UBA52-203ENST00000594527 SAMD9LQ8IVG5 1584 aa10.68□□□□□ -0.7
UBA52-203ENST00000594527 A2MP01023 1474 aa10.68□□□□□ -0.7
UBA52-203ENST00000594527 HNRNPMP52272 730 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBA52-203ENST00000594527 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
UBA52-203ENST00000594527 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
UBA52-203ENST00000594527 CLTCQ00610 1675 aaKnown RBP10.65□□□□□ -0.7
UBA52-203ENST00000594527 MIA2Q96PC5 1412 aa10.65□□□□□ -0.7
UBA52-203ENST00000594527 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
UBA52-203ENST00000594527 KIAA1107Q9UPP5 1409 aa10.63□□□□□ -0.71
UBA52-203ENST00000594527 PZPP20742 1482 aa10.62□□□□□ -0.71
UBA52-203ENST00000594527 NLRP1Q9C000 1473 aa10.62□□□□□ -0.71
UBA52-203ENST00000594527 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
UBA52-203ENST00000594527 ITSN2Q9NZM3 1697 aa10.62□□□□□ -0.71
UBA52-203ENST00000594527 FAM135AQ9P2D6 1515 aa10.62□□□□□ -0.71
UBA52-203ENST00000594527 DEPDC5O75140 1603 aa10.62□□□□□ -0.71
UBA52-203ENST00000594527 CDC42BPBQ9Y5S2 1711 aa10.61□□□□□ -0.71
UBA52-203ENST00000594527 ATP7AQ04656 1500 aa10.61□□□□□ -0.71
UBA52-203ENST00000594527 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
UBA52-203ENST00000594527 UGGT1Q9NYU2 1555 aa10.6□□□□□ -0.71
UBA52-203ENST00000594527 EEA1Q15075 1411 aa10.59□□□□□ -0.71
UBA52-203ENST00000594527 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
UBA52-203ENST00000594527 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
UBA52-203ENST00000594527 TRIM52Q96A61 297 aa10.59□□□□□ -0.71
UBA52-203ENST00000594527 DHX29Q7Z478 1369 aaKnown RBP10.59□□□□□ -0.71
UBA52-203ENST00000594527 SYNMO15061 1565 aa10.59□□□□□ -0.71
UBA52-203ENST00000594527 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.71
UBA52-203ENST00000594527 POLR1AO95602 1720 aaPredicted RBP10.58□□□□□ -0.72
UBA52-203ENST00000594527 ARHGAP35Q9NRY4 1499 aa10.58□□□□□ -0.72
UBA52-203ENST00000594527 ZNF772Q68DY9 489 aaPredicted RBP10.58□□□□□ -0.72
UBA52-203ENST00000594527 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
UBA52-203ENST00000594527 JCADQ9P266 1359 aa10.57□□□□□ -0.72
UBA52-203ENST00000594527 KIF3BO15066 747 aa10.57□□□□□ -0.72
UBA52-203ENST00000594527 CFDP1Q9UEE9 299 aaPredicted RBP10.57□□□□□ -0.72
UBA52-203ENST00000594527 SETD1AO15047 1707 aaKnown RBP10.57□□□□□ -0.72
UBA52-203ENST00000594527 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
UBA52-203ENST00000594527 INO80Q9ULG1 1556 aaPredicted RBP10.56□□□□□ -0.72
UBA52-203ENST00000594527 PLEKHH2Q8IVE3 1493 aa10.56□□□□□ -0.72
UBA52-203ENST00000594527 LTKP29376 864 aa10.56□□□□□ -0.72
UBA52-203ENST00000594527 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
UBA52-203ENST00000594527 TMEM94Q12767 1356 aa10.55□□□□□ -0.72
UBA52-203ENST00000594527 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
UBA52-203ENST00000594527 RXRBP28702 533 aa10.55□□□□□ -0.72
UBA52-203ENST00000594527 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
UBA52-203ENST00000594527 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
UBA52-203ENST00000594527 SPATA31A6Q5VVP1 1343 aa10.53□□□□□ -0.72
UBA52-203ENST00000594527 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
UBA52-203ENST00000594527 SLAIN2Q9P270 581 aa10.52□□□□□ -0.73
UBA52-203ENST00000594527 CCDC18Q5T9S5 1454 aa10.52□□□□□ -0.73
UBA52-203ENST00000594527 SCAF11Q99590 1463 aaKnown RBP10.52□□□□□ -0.73
UBA52-203ENST00000594527 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
UBA52-203ENST00000594527 CASKIN1Q8WXD9 1431 aa10.51□□□□□ -0.73
UBA52-203ENST00000594527 CDK12Q9NYV4 1490 aaPredicted RBP10.51□□□□□ -0.73
UBA52-203ENST00000594527 MBD5Q9P267 1494 aa10.51□□□□□ -0.73
UBA52-203ENST00000594527 KCNA6P17658 529 aa10.51□□□□□ -0.73
UBA52-203ENST00000594527 MEX3CQ5U5Q3 659 aaKnown RBP10.5□□□□□ -0.73
UBA52-203ENST00000594527 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
UBA52-203ENST00000594527 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
UBA52-203ENST00000594527 LRP6O75581 1613 aa10.5□□□□□ -0.73
UBA52-203ENST00000594527 LRRC9Q6ZRR7 1453 aa10.49□□□□□ -0.73
UBA52-203ENST00000594527 CCNB3Q8WWL7 1395 aa10.49□□□□□ -0.73
UBA52-203ENST00000594527 ARHGAP23Q9P227 1491 aa10.49□□□□□ -0.73
UBA52-203ENST00000594527 CDC42BPAQ5VT25 1732 aa10.48□□□□□ -0.73
UBA52-203ENST00000594527 EID1Q9Y6B2 187 aa10.48□□□□□ -0.73
UBA52-203ENST00000594527 FGD6Q6ZV73 1430 aa10.48□□□□□ -0.73
UBA52-203ENST00000594527 NCOA2Q15596 1464 aa10.48□□□□□ -0.73
UBA52-203ENST00000594527 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
UBA52-203ENST00000594527 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
UBA52-203ENST00000594527 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
UBA52-203ENST00000594527 MAP3K1Q13233 1512 aa10.47□□□□□ -0.73
UBA52-203ENST00000594527 SLIT1O75093 1534 aa10.46□□□□□ -0.74
UBA52-203ENST00000594527 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
UBA52-203ENST00000594527 ERVK-7P63135 1459 aa10.45□□□□□ -0.74
UBA52-203ENST00000594527 MSH6P52701 1360 aa10.45□□□□□ -0.74
UBA52-203ENST00000594527 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
UBA52-203ENST00000594527 LRRIQ1Q96JM4 1722 aa10.44□□□□□ -0.74
UBA52-203ENST00000594527 PRDM15P57071 1507 aaPredicted RBP10.43□□□□□ -0.74
UBA52-203ENST00000594527 ZBTB22O15209 634 aa10.43□□□□□ -0.74
UBA52-203ENST00000594527 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
UBA52-203ENST00000594527 SLC26A8Q96RN1 970 aa10.43□□□□□ -0.74
UBA52-203ENST00000594527 RGS12O14924 1447 aa10.42□□□□□ -0.74
UBA52-203ENST00000594527 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 AFF2P51816 1311 aa10.42□□□□□ -0.74
UBA52-203ENST00000594527 NUTM2BA6NNL0 878 aaPredicted RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 NUTM2EB1AL46 878 aaPredicted RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 NUTM2AQ8IVF1 878 aaPredicted RBP10.42□□□□□ -0.74
UBA52-203ENST00000594527 ABCC3O15438 1527 aa10.42□□□□□ -0.74
UBA52-203ENST00000594527 QTRT2Q9H974 415 aaKnown RBP10.41□□□□□ -0.74
UBA52-203ENST00000594527 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.74
UBA52-203ENST00000594527 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
UBA52-203ENST00000594527 FYCO1Q9BQS8 1478 aa10.4□□□□□ -0.74
UBA52-203ENST00000594527 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
UBA52-203ENST00000594527 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
UBA52-203ENST00000594527 PHLPP1O60346 1717 aa10.38□□□□□ -0.75
UBA52-203ENST00000594527 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
UBA52-203ENST00000594527 EP400Q96L91 3159 aa10.38□□□□□ -0.75
UBA52-203ENST00000594527 TET3O43151 1660 aa10.38□□□□□ -0.75
UBA52-203ENST00000594527 CAMSAP2Q08AD1 1489 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms