RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 ARID4BQ4LE39 1312 aaPredicted RBP15.88■□□□□ 0.13
SMAD4-214ENST00000592186 AGLP35573 1532 aa15.87■□□□□ 0.13
SMAD4-214ENST00000592186 PIAS4Q8N2W9 510 aaPredicted RBP15.85■□□□□ 0.13
SMAD4-214ENST00000592186 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
SMAD4-214ENST00000592186 GGT6Q6P531 493 aa15.83■□□□□ 0.12
SMAD4-214ENST00000592186 KANK1Q14678 1352 aa15.83■□□□□ 0.12
SMAD4-214ENST00000592186 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.12
SMAD4-214ENST00000592186 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
SMAD4-214ENST00000592186 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
SMAD4-214ENST00000592186 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.123e-6■■□□□ 11.7
SMAD4-214ENST00000592186 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
SMAD4-214ENST00000592186 NUP155O75694 1391 aa15.79■□□□□ 0.12
SMAD4-214ENST00000592186 BCORL1Q5H9F3 1711 aa15.79■□□□□ 0.12
SMAD4-214ENST00000592186 WASHC2CQ9Y4E1 1318 aa15.79■□□□□ 0.12
SMAD4-214ENST00000592186 MSH5O43196 834 aa15.78■□□□□ 0.12
SMAD4-214ENST00000592186 MLECQ14165 292 aa15.78■□□□□ 0.12
SMAD4-214ENST00000592186 FAM135AQ9P2D6 1515 aa15.74■□□□□ 0.11
SMAD4-214ENST00000592186 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
SMAD4-214ENST00000592186 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
SMAD4-214ENST00000592186 DEPDC5O75140 1603 aa15.73■□□□□ 0.11
SMAD4-214ENST00000592186 MPHOSPH9Q99550 1183 aa15.73■□□□□ 0.11
SMAD4-214ENST00000592186 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
SMAD4-214ENST00000592186 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
SMAD4-214ENST00000592186 UNC13BO14795 1591 aa15.73■□□□□ 0.11
SMAD4-214ENST00000592186 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
SMAD4-214ENST00000592186 SIGLEC1Q9BZZ2 1709 aa15.7■□□□□ 0.1
SMAD4-214ENST00000592186 VWDEQ8N2E2 1590 aa15.7■□□□□ 0.1
SMAD4-214ENST00000592186 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
SMAD4-214ENST00000592186 LMTK2Q8IWU2 1503 aa15.69■□□□□ 0.1
SMAD4-214ENST00000592186 PKD2Q13563 968 aa15.68■□□□□ 0.1
SMAD4-214ENST00000592186 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
SMAD4-214ENST00000592186 ZMYM3Q14202 1370 aa15.67■□□□□ 0.1
SMAD4-214ENST00000592186 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
SMAD4-214ENST00000592186 ABCC3O15438 1527 aa15.66■□□□□ 0.1
SMAD4-214ENST00000592186 PZPP20742 1482 aa15.66■□□□□ 0.1
SMAD4-214ENST00000592186 ZC3H13Q5T200 1668 aaKnown RBP15.65■□□□□ 0.1
SMAD4-214ENST00000592186 RPRD2Q5VT52 1461 aaKnown RBP15.64■□□□□ 0.09
SMAD4-214ENST00000592186 ADAMTSL3P82987 1691 aa15.62■□□□□ 0.09
SMAD4-214ENST00000592186 TET3O43151 1660 aa15.62■□□□□ 0.09
SMAD4-214ENST00000592186 DHX57Q6P158 1386 aaKnown RBP15.61■□□□□ 0.09
SMAD4-214ENST00000592186 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
SMAD4-214ENST00000592186 CLSPNQ9HAW4 1339 aa15.6■□□□□ 0.09
SMAD4-214ENST00000592186 NPATQ14207 1427 aa15.6■□□□□ 0.09
SMAD4-214ENST00000592186 KDM4FA0A1W2PPD8 638 aa15.6■□□□□ 0.09
SMAD4-214ENST00000592186 CCER1Q8TC90 406 aaPredicted RBP15.6■□□□□ 0.09
SMAD4-214ENST00000592186 MROH2AA6NES4 1674 aa15.59■□□□□ 0.09
SMAD4-214ENST00000592186 CLTCQ00610 1675 aaKnown RBP15.59■□□□□ 0.09
SMAD4-214ENST00000592186 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
SMAD4-214ENST00000592186 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
SMAD4-214ENST00000592186 CEP152O94986 1710 aa15.58■□□□□ 0.08
SMAD4-214ENST00000592186 CAMSAP1Q5T5Y3 1602 aa15.58■□□□□ 0.08
SMAD4-214ENST00000592186 MADDQ8WXG6 1647 aa15.58■□□□□ 0.08
SMAD4-214ENST00000592186 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
SMAD4-214ENST00000592186 FBXO31Q5XUX0 539 aaPredicted RBP15.57■□□□□ 0.08
SMAD4-214ENST00000592186 PTPRTO14522 1441 aa15.57■□□□□ 0.08
SMAD4-214ENST00000592186 PTPRMP28827 1452 aa15.55■□□□□ 0.08
SMAD4-214ENST00000592186 ANKRD30BQ9BXX2 1392 aa15.55■□□□□ 0.08
SMAD4-214ENST00000592186 NOS1P29475 1434 aa15.55■□□□□ 0.08
SMAD4-214ENST00000592186 E9PCH4 1651 aa15.54■□□□□ 0.08
SMAD4-214ENST00000592186 TNRQ92752 1358 aa15.53■□□□□ 0.08
SMAD4-214ENST00000592186 ERVK-7P63135 1459 aa15.52■□□□□ 0.08
SMAD4-214ENST00000592186 RIMS1Q86UR5 1692 aaKnown RBP15.52■□□□□ 0.08
SMAD4-214ENST00000592186 CCDC144AA2RUR9 1427 aa15.51■□□□□ 0.07
SMAD4-214ENST00000592186 PLA2R1Q13018 1463 aa15.51■□□□□ 0.07
SMAD4-214ENST00000592186 SPATA31D1Q6ZQQ2 1576 aa15.51■□□□□ 0.07
SMAD4-214ENST00000592186 IDI1Q13907 227 aa15.5■□□□□ 0.07
SMAD4-214ENST00000592186 C3P01024 1663 aa15.5■□□□□ 0.07
SMAD4-214ENST00000592186 TRPM2O94759 1503 aa15.49■□□□□ 0.07
SMAD4-214ENST00000592186 NLRP1Q9C000 1473 aa15.48■□□□□ 0.07
SMAD4-214ENST00000592186 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
SMAD4-214ENST00000592186 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
SMAD4-214ENST00000592186 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
SMAD4-214ENST00000592186 SPHKAPQ2M3C7 1700 aa15.46■□□□□ 0.06
SMAD4-214ENST00000592186 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
SMAD4-214ENST00000592186 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
SMAD4-214ENST00000592186 THEMISQ8N1K5 641 aaPredicted RBP15.44■□□□□ 0.06
SMAD4-214ENST00000592186 SYNMO15061 1565 aa15.44■□□□□ 0.06
SMAD4-214ENST00000592186 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
SMAD4-214ENST00000592186 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
SMAD4-214ENST00000592186 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
SMAD4-214ENST00000592186 SETD1BQ9UPS6 1966 aaKnown RBP15.43■□□□□ 0.06
SMAD4-214ENST00000592186 UHRF1BP1Q6BDS2 1440 aa15.42■□□□□ 0.06
SMAD4-214ENST00000592186 CFAP65Q6ZU64 1925 aaKnown RBP15.42■□□□□ 0.06
SMAD4-214ENST00000592186 RPGRIP1LQ68CZ1 1315 aa15.42■□□□□ 0.06
SMAD4-214ENST00000592186 PIK3C2BO00750 1634 aa15.41■□□□□ 0.06
SMAD4-214ENST00000592186 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
SMAD4-214ENST00000592186 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
SMAD4-214ENST00000592186 ZNF326Q5BKZ1 582 aaKnown RBP15.4■□□□□ 0.06
SMAD4-214ENST00000592186 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
SMAD4-214ENST00000592186 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
SMAD4-214ENST00000592186 SPATA31E1Q6ZUB1 1445 aa15.39■□□□□ 0.05
SMAD4-214ENST00000592186 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
SMAD4-214ENST00000592186 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMAD4-214ENST00000592186 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
SMAD4-214ENST00000592186 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
SMAD4-214ENST00000592186 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
SMAD4-214ENST00000592186 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
SMAD4-214ENST00000592186 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
SMAD4-214ENST00000592186 TMEM131LA2VDJ0 1609 aa15.35■□□□□ 0.05
SMAD4-214ENST00000592186 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms