RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
SMARCA4-216ENST00000591545 MYOM3Q5VTT5 1437 aa16.79■□□□□ 0.28
SMARCA4-216ENST00000591545 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-216ENST00000591545 COG3Q96JB2 828 aa16.78■□□□□ 0.28
SMARCA4-216ENST00000591545 RTN4Q9NQC3 1192 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-216ENST00000591545 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
SMARCA4-216ENST00000591545 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-216ENST00000591545 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-216ENST00000591545 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-216ENST00000591545 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
SMARCA4-216ENST00000591545 ATF3P18847 181 aa16.77■□□□□ 0.28
SMARCA4-216ENST00000591545 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-216ENST00000591545 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
SMARCA4-216ENST00000591545 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
SMARCA4-216ENST00000591545 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
SMARCA4-216ENST00000591545 TULP1O00294 542 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 G3V3G9 751 aa16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 CUX1P39880 1505 aa16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 PSME1Q06323 249 aa16.75■□□□□ 0.27
SMARCA4-216ENST00000591545 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-216ENST00000591545 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
SMARCA4-216ENST00000591545 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
SMARCA4-216ENST00000591545 NESP48681 1621 aa16.74■□□□□ 0.27
SMARCA4-216ENST00000591545 GORABQ5T7V8 394 aa16.73■□□□□ 0.27
SMARCA4-216ENST00000591545 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
SMARCA4-216ENST00000591545 ARAP1Q96P48 1450 aa16.72■□□□□ 0.27
SMARCA4-216ENST00000591545 CHMP3Q9Y3E7 222 aa16.72■□□□□ 0.27
SMARCA4-216ENST00000591545 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
SMARCA4-216ENST00000591545 KIF15Q9NS87 1388 aa16.71■□□□□ 0.27
SMARCA4-216ENST00000591545 RWDD1Q9H446 243 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-216ENST00000591545 RCAN3Q9UKA8 241 aa16.71■□□□□ 0.27
SMARCA4-216ENST00000591545 PRXQ9BXM0 1461 aa16.71■□□□□ 0.27
SMARCA4-216ENST00000591545 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
SMARCA4-216ENST00000591545 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
SMARCA4-216ENST00000591545 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
SMARCA4-216ENST00000591545 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
SMARCA4-216ENST00000591545 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
SMARCA4-216ENST00000591545 KIAA1211Q6ZU35 1233 aa16.67■□□□□ 0.26
SMARCA4-216ENST00000591545 APBB1O00213 710 aa16.67■□□□□ 0.26
SMARCA4-216ENST00000591545 MSH5O43196 834 aa16.67■□□□□ 0.26
SMARCA4-216ENST00000591545 ITPRIPQ8IWB1 547 aa16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 AFAP1Q8N556 730 aa16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 TEFQ10587 303 aa16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-216ENST00000591545 HMMRO75330 724 aa16.65■□□□□ 0.26
SMARCA4-216ENST00000591545 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
SMARCA4-216ENST00000591545 KIAA2012Q0VF49 1180 aa16.65■□□□□ 0.26
SMARCA4-216ENST00000591545 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
SMARCA4-216ENST00000591545 SMC4Q9NTJ3 1288 aa16.65■□□□□ 0.26
SMARCA4-216ENST00000591545 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
SMARCA4-216ENST00000591545 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-216ENST00000591545 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
SMARCA4-216ENST00000591545 GPATCH3Q96I76 525 aa16.64■□□□□ 0.25
SMARCA4-216ENST00000591545 PANK3Q9H999 370 aa16.63■□□□□ 0.25
SMARCA4-216ENST00000591545 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-216ENST00000591545 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
SMARCA4-216ENST00000591545 SLC4A10Q6U841 1118 aa16.62■□□□□ 0.25
SMARCA4-216ENST00000591545 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
SMARCA4-216ENST00000591545 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
SMARCA4-216ENST00000591545 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-216ENST00000591545 FRAT2O75474 233 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-216ENST00000591545 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
SMARCA4-216ENST00000591545 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-216ENST00000591545 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
SMARCA4-216ENST00000591545 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
SMARCA4-216ENST00000591545 FGD6Q6ZV73 1430 aa16.59■□□□□ 0.25
SMARCA4-216ENST00000591545 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
SMARCA4-216ENST00000591545 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
SMARCA4-216ENST00000591545 CASKIN1Q8WXD9 1431 aa16.59■□□□□ 0.25
SMARCA4-216ENST00000591545 TSHZ2Q9NRE2 1034 aa16.58■□□□□ 0.25
SMARCA4-216ENST00000591545 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-216ENST00000591545 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-216ENST00000591545 GOLGA6L3A6NEY3 463 aa16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 SPRYD3Q8NCJ5 442 aa16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
SMARCA4-216ENST00000591545 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-216ENST00000591545 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-216ENST00000591545 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
SMARCA4-216ENST00000591545 GPRASP1Q5JY77 1395 aa16.55■□□□□ 0.24
SMARCA4-216ENST00000591545 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
SMARCA4-216ENST00000591545 USP47Q96K76 1375 aa16.54■□□□□ 0.24
SMARCA4-216ENST00000591545 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
SMARCA4-216ENST00000591545 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
SMARCA4-216ENST00000591545 NEXNQ0ZGT2 675 aa16.53■□□□□ 0.24
SMARCA4-216ENST00000591545 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
SMARCA4-216ENST00000591545 TPM4P67936 248 aa16.53■□□□□ 0.24
SMARCA4-216ENST00000591545 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
SMARCA4-216ENST00000591545 SLKQ9H2G2 1235 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-216ENST00000591545 NCOA2Q15596 1464 aa16.52■□□□□ 0.23
SMARCA4-216ENST00000591545 ANKLE2Q86XL3 938 aa16.52■□□□□ 0.23
SMARCA4-216ENST00000591545 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
SMARCA4-216ENST00000591545 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms