RNA–Protein interactions for RNA: ENST00000589550.1

PIK3C3-211, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-211ENST00000589550 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
PIK3C3-211ENST00000589550 ARID3AQ99856 593 aa9.68□□□□□ -0.86
PIK3C3-211ENST00000589550 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
PIK3C3-211ENST00000589550 A6NJR5 290 aa9.67□□□□□ -0.86
PIK3C3-211ENST00000589550 PTGDRQ13258 359 aa9.67□□□□□ -0.86
PIK3C3-211ENST00000589550 UPF1Q92900 1129 aaKnown RBP eCLIP9.67□□□□□ -0.86
PIK3C3-211ENST00000589550 APBB1O00213 710 aa9.66□□□□□ -0.86
PIK3C3-211ENST00000589550 FECHP22830 423 aa9.66□□□□□ -0.86
PIK3C3-211ENST00000589550 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
PIK3C3-211ENST00000589550 DDX12PQ92771 950 aa9.66□□□□□ -0.86
PIK3C3-211ENST00000589550 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
PIK3C3-211ENST00000589550 EVI5O60447 810 aa9.63□□□□□ -0.87
PIK3C3-211ENST00000589550 SH3D19Q5HYK7 790 aa9.63□□□□□ -0.87
PIK3C3-211ENST00000589550 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
PIK3C3-211ENST00000589550 ARID3CA6NKF2 412 aa9.62□□□□□ -0.87
PIK3C3-211ENST00000589550 MS4A1P11836 297 aa9.62□□□□□ -0.87
PIK3C3-211ENST00000589550 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
PIK3C3-211ENST00000589550 CLCN1P35523 988 aa9.61□□□□□ -0.87
PIK3C3-211ENST00000589550 RANGAP1P46060 587 aaPredicted RBP9.6□□□□□ -0.87
PIK3C3-211ENST00000589550 TRAK2O60296 914 aa9.59□□□□□ -0.87
PIK3C3-211ENST00000589550 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
PIK3C3-211ENST00000589550 MCM6Q14566 821 aa9.58□□□□□ -0.88
PIK3C3-211ENST00000589550 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
PIK3C3-211ENST00000589550 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
PIK3C3-211ENST00000589550 EPAS1Q99814 870 aa9.57□□□□□ -0.88
PIK3C3-211ENST00000589550 EN1Q05925 392 aaPredicted RBP9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 MMRN1Q13201 1228 aa9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 TMEM92Q6UXU6 159 aa9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 PTCD2Q8WV60 388 aaKnown RBP9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 REPIN1Q9BWE0 567 aaKnown RBP9.56□□□□□ -0.88
PIK3C3-211ENST00000589550 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
PIK3C3-211ENST00000589550 CLUAP1Q96AJ1 413 aa9.55□□□□□ -0.88
PIK3C3-211ENST00000589550 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
PIK3C3-211ENST00000589550 PHF14O94880 888 aa9.54□□□□□ -0.88
PIK3C3-211ENST00000589550 PDIA4P13667 645 aaKnown RBP9.54□□□□□ -0.88
PIK3C3-211ENST00000589550 CCDC82Q8N4S0 544 aa9.54□□□□□ -0.88
PIK3C3-211ENST00000589550 HRCP23327 699 aa9.53□□□□□ -0.88
PIK3C3-211ENST00000589550 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.89
PIK3C3-211ENST00000589550 C3orf67Q6ZVT6 689 aa9.52□□□□□ -0.89
PIK3C3-211ENST00000589550 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
PIK3C3-211ENST00000589550 MAP3K7O43318 606 aa9.51□□□□□ -0.89
PIK3C3-211ENST00000589550 SLC34A2O95436 690 aa9.51□□□□□ -0.89
PIK3C3-211ENST00000589550 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
PIK3C3-211ENST00000589550 PROSER2Q86WR7 435 aaPredicted RBP9.51□□□□□ -0.89
PIK3C3-211ENST00000589550 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
PIK3C3-211ENST00000589550 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
PIK3C3-211ENST00000589550 RAD21O60216 631 aa9.49□□□□□ -0.89
PIK3C3-211ENST00000589550 BEGAINQ9BUH8 593 aa9.48□□□□□ -0.89
PIK3C3-211ENST00000589550 OATP04181 439 aa9.47□□□□□ -0.89
PIK3C3-211ENST00000589550 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
PIK3C3-211ENST00000589550 FAM217BQ9NTX9 383 aaPredicted RBP9.47□□□□□ -0.89
PIK3C3-211ENST00000589550 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
PIK3C3-211ENST00000589550 EMP3P54852 163 aa9.46□□□□□ -0.9
PIK3C3-211ENST00000589550 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
PIK3C3-211ENST00000589550 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
PIK3C3-211ENST00000589550 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
PIK3C3-211ENST00000589550 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
PIK3C3-211ENST00000589550 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
PIK3C3-211ENST00000589550 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
PIK3C3-211ENST00000589550 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
PIK3C3-211ENST00000589550 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
PIK3C3-211ENST00000589550 CCDC97Q96F63 343 aaPredicted RBP9.44□□□□□ -0.9
PIK3C3-211ENST00000589550 ATP1B4Q9UN42 357 aaPredicted RBP9.44□□□□□ -0.9
PIK3C3-211ENST00000589550 PCDHGA10Q9Y5H3 936 aa9.44□□□□□ -0.9
PIK3C3-211ENST00000589550 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
PIK3C3-211ENST00000589550 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
PIK3C3-211ENST00000589550 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.43□□□□□ -0.9
PIK3C3-211ENST00000589550 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
PIK3C3-211ENST00000589550 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
PIK3C3-211ENST00000589550 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
PIK3C3-211ENST00000589550 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
PIK3C3-211ENST00000589550 CLK2P49760 499 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 JPH4Q96JJ6 628 aa9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
PIK3C3-211ENST00000589550 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
PIK3C3-211ENST00000589550 POM121Q96HA1 1249 aa9.4□□□□□ -0.9
PIK3C3-211ENST00000589550 HS3ST6Q96QI5 342 aa9.39□□□□□ -0.91
PIK3C3-211ENST00000589550 ADGRG1Q9Y653 693 aa9.39□□□□□ -0.91
PIK3C3-211ENST00000589550 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
PIK3C3-211ENST00000589550 TRAIPQ9BWF2 469 aa9.38□□□□□ -0.91
PIK3C3-211ENST00000589550 COG6Q9Y2V7 657 aa9.38□□□□□ -0.91
PIK3C3-211ENST00000589550 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
PIK3C3-211ENST00000589550 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
PIK3C3-211ENST00000589550 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
PIK3C3-211ENST00000589550 TBC1D2Q9BYX2 928 aa9.37□□□□□ -0.91
PIK3C3-211ENST00000589550 RFC5P40937 340 aa9.36□□□□□ -0.91
PIK3C3-211ENST00000589550 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
PIK3C3-211ENST00000589550 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
PIK3C3-211ENST00000589550 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
PIK3C3-211ENST00000589550 TTC13Q8NBP0 860 aa9.35□□□□□ -0.91
PIK3C3-211ENST00000589550 SOCS7O14512 581 aa9.34□□□□□ -0.91
PIK3C3-211ENST00000589550 FOSBP53539 338 aa9.34□□□□□ -0.91
PIK3C3-211ENST00000589550 FAM161AQ3B820 660 aa9.34□□□□□ -0.91
PIK3C3-211ENST00000589550 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
PIK3C3-211ENST00000589550 WWC1Q8IX03 1113 aa9.34□□□□□ -0.91
PIK3C3-211ENST00000589550 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms