RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 SIGLEC1Q9BZZ2 1709 aa12.35□□□□□ -0.43
APOC1-202ENST00000588750 ACIN1Q9UKV3 1341 aaKnown RBP12.35□□□□□ -0.43
APOC1-202ENST00000588750 PHF23Q9BUL5 403 aaPredicted RBP12.34□□□□□ -0.43
APOC1-202ENST00000588750 RIMS1Q86UR5 1692 aaKnown RBP12.34□□□□□ -0.43
APOC1-202ENST00000588750 PTPRMP28827 1452 aa12.34□□□□□ -0.43
APOC1-202ENST00000588750 ANKRD50Q9ULJ7 1429 aa12.33□□□□□ -0.44
APOC1-202ENST00000588750 WASHC2CQ9Y4E1 1318 aa12.33□□□□□ -0.44
APOC1-202ENST00000588750 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
APOC1-202ENST00000588750 RNF17Q9BXT8 1623 aaKnown RBP12.32□□□□□ -0.44
APOC1-202ENST00000588750 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
APOC1-202ENST00000588750 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
APOC1-202ENST00000588750 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
APOC1-202ENST00000588750 ZMYM3Q14202 1370 aa12.29□□□□□ -0.44
APOC1-202ENST00000588750 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
APOC1-202ENST00000588750 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
APOC1-202ENST00000588750 DEPDC5O75140 1603 aa12.28□□□□□ -0.44
APOC1-202ENST00000588750 HFM1A2PYH4 1435 aa12.27□□□□□ -0.45
APOC1-202ENST00000588750 NPATQ14207 1427 aa12.27□□□□□ -0.45
APOC1-202ENST00000588750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.451e-9■□□□□ 10.7
APOC1-202ENST00000588750 C3P01024 1663 aa12.26□□□□□ -0.45
APOC1-202ENST00000588750 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
APOC1-202ENST00000588750 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
APOC1-202ENST00000588750 SETD1BQ9UPS6 1966 aaKnown RBP12.25□□□□□ -0.45
APOC1-202ENST00000588750 MROH1Q8NDA8 1641 aa12.23□□□□□ -0.45
APOC1-202ENST00000588750 ABCC3O15438 1527 aa12.23□□□□□ -0.45
APOC1-202ENST00000588750 LMTK2Q8IWU2 1503 aa12.23□□□□□ -0.45
APOC1-202ENST00000588750 PZPP20742 1482 aa12.23□□□□□ -0.45
APOC1-202ENST00000588750 NAIPQ13075 1403 aa12.23□□□□□ -0.45
APOC1-202ENST00000588750 UNC13BO14795 1591 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 ARHGAP31Q2M1Z3 1444 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 CEP152O94986 1710 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
APOC1-202ENST00000588750 CEBPAP49715 358 aaPredicted RBP12.21□□□□□ -0.45
APOC1-202ENST00000588750 VWDEQ8N2E2 1590 aa12.21□□□□□ -0.46
APOC1-202ENST00000588750 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.46
APOC1-202ENST00000588750 NUP155O75694 1391 aa12.2□□□□□ -0.46
APOC1-202ENST00000588750 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
APOC1-202ENST00000588750 TRIM52Q96A61 297 aa12.19□□□□□ -0.46
APOC1-202ENST00000588750 TET3O43151 1660 aa12.19□□□□□ -0.46
APOC1-202ENST00000588750 IQGAP3Q86VI3 1631 aa12.19□□□□□ -0.46
APOC1-202ENST00000588750 TNRQ92752 1358 aa12.18□□□□□ -0.46
APOC1-202ENST00000588750 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
APOC1-202ENST00000588750 SPATA31D1Q6ZQQ2 1576 aa12.17□□□□□ -0.46
APOC1-202ENST00000588750 NLRP1Q9C000 1473 aa12.16□□□□□ -0.46
APOC1-202ENST00000588750 HRCP23327 699 aa12.16□□□□□ -0.46
APOC1-202ENST00000588750 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
APOC1-202ENST00000588750 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.47
APOC1-202ENST00000588750 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
APOC1-202ENST00000588750 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
APOC1-202ENST00000588750 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
APOC1-202ENST00000588750 ZNF142P52746 1687 aaPredicted RBP12.13□□□□□ -0.47
APOC1-202ENST00000588750 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
APOC1-202ENST00000588750 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
APOC1-202ENST00000588750 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
APOC1-202ENST00000588750 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
APOC1-202ENST00000588750 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
APOC1-202ENST00000588750 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
APOC1-202ENST00000588750 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
APOC1-202ENST00000588750 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
APOC1-202ENST00000588750 NOS1P29475 1434 aa12.11□□□□□ -0.47
APOC1-202ENST00000588750 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
APOC1-202ENST00000588750 RAB3GAP2Q9H2M9 1393 aa12.1□□□□□ -0.47
APOC1-202ENST00000588750 E9PCH4 1651 aa12.1□□□□□ -0.47
APOC1-202ENST00000588750 UGGT1Q9NYU2 1555 aa12.09□□□□□ -0.47
APOC1-202ENST00000588750 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
APOC1-202ENST00000588750 HDGFP51858 240 aaKnown RBP12.08□□□□□ -0.48
APOC1-202ENST00000588750 PKD2Q13563 968 aa12.08□□□□□ -0.48
APOC1-202ENST00000588750 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
APOC1-202ENST00000588750 MPHOSPH9Q99550 1183 aa12.07□□□□□ -0.48
APOC1-202ENST00000588750 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
APOC1-202ENST00000588750 HSPA2P54652 639 aa12.06□□□□□ -0.48
APOC1-202ENST00000588750 IDI1Q13907 227 aa12.05□□□□□ -0.48
APOC1-202ENST00000588750 ANKLE2Q86XL3 938 aa12.05□□□□□ -0.48
APOC1-202ENST00000588750 EID1Q9Y6B2 187 aa12.05□□□□□ -0.48
APOC1-202ENST00000588750 SYNMO15061 1565 aa12.05□□□□□ -0.48
APOC1-202ENST00000588750 PTPRTO14522 1441 aa12.04□□□□□ -0.48
APOC1-202ENST00000588750 TRPM2O94759 1503 aa12.04□□□□□ -0.48
APOC1-202ENST00000588750 UBR1Q8IWV7 1749 aa12.03□□□□□ -0.48
APOC1-202ENST00000588750 ADGRB3O60242 1522 aa12.03□□□□□ -0.48
APOC1-202ENST00000588750 PIK3C2BO00750 1634 aa12.03□□□□□ -0.48
APOC1-202ENST00000588750 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.49
APOC1-202ENST00000588750 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
APOC1-202ENST00000588750 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.01□□□□□ -0.49
APOC1-202ENST00000588750 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
APOC1-202ENST00000588750 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
APOC1-202ENST00000588750 SLIT1O75093 1534 aa12□□□□□ -0.49
APOC1-202ENST00000588750 KIF1BO60333 1816 aa12□□□□□ -0.49
APOC1-202ENST00000588750 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
APOC1-202ENST00000588750 TMEM131LA2VDJ0 1609 aa11.99□□□□□ -0.49
APOC1-202ENST00000588750 STRCQ7RTU9 1775 aa11.98□□□□□ -0.49
APOC1-202ENST00000588750 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
APOC1-202ENST00000588750 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
APOC1-202ENST00000588750 PPP1R15AO75807 674 aaPredicted RBP11.98□□□□□ -0.49
APOC1-202ENST00000588750 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
APOC1-202ENST00000588750 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
APOC1-202ENST00000588750 MED14O60244 1454 aa11.96□□□□□ -0.49
APOC1-202ENST00000588750 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
APOC1-202ENST00000588750 CLTCL1P53675 1640 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms