RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PELP1Q8IZL8 1130 aaKnown RBP21.44■■□□□ 1.02
CCDC43-203ENST00000588210 ROCK1Q13464 1354 aa21.42■■□□□ 1.02
CCDC43-203ENST00000588210 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
CCDC43-203ENST00000588210 KIF3BO15066 747 aa21.41■■□□□ 1.02
CCDC43-203ENST00000588210 ERBINQ96RT1 1412 aa21.4■■□□□ 1.02
CCDC43-203ENST00000588210 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
CCDC43-203ENST00000588210 GGT6Q6P531 493 aa21.4■■□□□ 1.02
CCDC43-203ENST00000588210 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.02
CCDC43-203ENST00000588210 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
CCDC43-203ENST00000588210 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
CCDC43-203ENST00000588210 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
CCDC43-203ENST00000588210 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
CCDC43-203ENST00000588210 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
CCDC43-203ENST00000588210 PTPRMP28827 1452 aa21.35■■□□□ 1.01
CCDC43-203ENST00000588210 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
CCDC43-203ENST00000588210 ANKRD50Q9ULJ7 1429 aa21.33■■□□□ 1.01
CCDC43-203ENST00000588210 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1
CCDC43-203ENST00000588210 DHX57Q6P158 1386 aaKnown RBP21.33■■□□□ 1
CCDC43-203ENST00000588210 FAM135AQ9P2D6 1515 aa21.3■■□□□ 1
CCDC43-203ENST00000588210 WASHC2CQ9Y4E1 1318 aa21.27■■□□□ 1
CCDC43-203ENST00000588210 KDM5DQ9BY66 1539 aa21.27■■□□□ 1
CCDC43-203ENST00000588210 MROH2AA6NES4 1674 aa21.27■■□□□ 1
CCDC43-203ENST00000588210 CLTCQ00610 1675 aaKnown RBP21.27■■□□□ 1
CCDC43-203ENST00000588210 DEPDC5O75140 1603 aa21.27■□□□□ 0.99
CCDC43-203ENST00000588210 MROH1Q8NDA8 1641 aa21.27■□□□□ 0.99
CCDC43-203ENST00000588210 ZMYM3Q14202 1370 aa21.26■□□□□ 0.99
CCDC43-203ENST00000588210 PRDM15P57071 1507 aaPredicted RBP21.26■□□□□ 0.99
CCDC43-203ENST00000588210 HFM1A2PYH4 1435 aa21.24■□□□□ 0.99
CCDC43-203ENST00000588210 NAIPQ13075 1403 aa21.24■□□□□ 0.99
CCDC43-203ENST00000588210 CEBPAP49715 358 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-203ENST00000588210 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
CCDC43-203ENST00000588210 KANK1Q14678 1352 aa21.23■□□□□ 0.99
CCDC43-203ENST00000588210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.992e-6■□□□□ 10.7
CCDC43-203ENST00000588210 GTF3C3Q9Y5Q9 886 aa21.23■□□□□ 0.99
CCDC43-203ENST00000588210 C3P01024 1663 aa21.23■□□□□ 0.99
CCDC43-203ENST00000588210 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
CCDC43-203ENST00000588210 ABCC3O15438 1527 aa21.21■□□□□ 0.99
CCDC43-203ENST00000588210 GCC2Q8IWJ2 1684 aa21.21■□□□□ 0.99
CCDC43-203ENST00000588210 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
CCDC43-203ENST00000588210 UNC13BO14795 1591 aa21.18■□□□□ 0.98
CCDC43-203ENST00000588210 MIER1Q8N108 512 aa21.17■□□□□ 0.98
CCDC43-203ENST00000588210 CEP152O94986 1710 aa21.17■□□□□ 0.98
CCDC43-203ENST00000588210 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
CCDC43-203ENST00000588210 NPATQ14207 1427 aa21.16■□□□□ 0.98
CCDC43-203ENST00000588210 PZPP20742 1482 aa21.15■□□□□ 0.98
CCDC43-203ENST00000588210 CAMSAP1Q5T5Y3 1602 aa21.14■□□□□ 0.97
CCDC43-203ENST00000588210 SETD1BQ9UPS6 1966 aaKnown RBP21.13■□□□□ 0.97
CCDC43-203ENST00000588210 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
CCDC43-203ENST00000588210 NUP155O75694 1391 aa21.12■□□□□ 0.97
CCDC43-203ENST00000588210 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
CCDC43-203ENST00000588210 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
CCDC43-203ENST00000588210 IQGAP3Q86VI3 1631 aa21.09■□□□□ 0.97
CCDC43-203ENST00000588210 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.96
CCDC43-203ENST00000588210 EFCAB6Q5THR3 1501 aa21.07■□□□□ 0.96
CCDC43-203ENST00000588210 TET3O43151 1660 aa21.07■□□□□ 0.96
CCDC43-203ENST00000588210 UHRF1BP1Q6BDS2 1440 aa21.06■□□□□ 0.96
CCDC43-203ENST00000588210 SPATA31D1Q6ZQQ2 1576 aa21.05■□□□□ 0.96
CCDC43-203ENST00000588210 TNRQ92752 1358 aa21.05■□□□□ 0.96
CCDC43-203ENST00000588210 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
CCDC43-203ENST00000588210 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
CCDC43-203ENST00000588210 ERVK-7P63135 1459 aa21.04■□□□□ 0.96
CCDC43-203ENST00000588210 RPRD2Q5VT52 1461 aaKnown RBP21.04■□□□□ 0.96
CCDC43-203ENST00000588210 LMTK3Q96Q04 1460 aa21.04■□□□□ 0.96
CCDC43-203ENST00000588210 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
CCDC43-203ENST00000588210 CFAP65Q6ZU64 1925 aaKnown RBP21.02■□□□□ 0.95
CCDC43-203ENST00000588210 MYO3AQ8NEV4 1616 aa21.01■□□□□ 0.95
CCDC43-203ENST00000588210 NLRP1Q9C000 1473 aa20.99■□□□□ 0.95
CCDC43-203ENST00000588210 E9PCH4 1651 aa20.98■□□□□ 0.95
CCDC43-203ENST00000588210 NOS1P29475 1434 aa20.98■□□□□ 0.95
CCDC43-203ENST00000588210 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
CCDC43-203ENST00000588210 ZNF142P52746 1687 aaPredicted RBP20.96■□□□□ 0.95
CCDC43-203ENST00000588210 CEP170BQ9Y4F5 1589 aaPredicted RBP20.96■□□□□ 0.95
CCDC43-203ENST00000588210 A2ML1A8K2U0 1454 aa20.96■□□□□ 0.95
CCDC43-203ENST00000588210 HSPA2P54652 639 aa20.94■□□□□ 0.94
CCDC43-203ENST00000588210 PKD2Q13563 968 aa20.92■□□□□ 0.94
CCDC43-203ENST00000588210 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
CCDC43-203ENST00000588210 SYNMO15061 1565 aa20.92■□□□□ 0.94
CCDC43-203ENST00000588210 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
CCDC43-203ENST00000588210 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
CCDC43-203ENST00000588210 IDI1Q13907 227 aa20.89■□□□□ 0.93
CCDC43-203ENST00000588210 PTPRTO14522 1441 aa20.89■□□□□ 0.93
CCDC43-203ENST00000588210 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
CCDC43-203ENST00000588210 SPHKAPQ2M3C7 1700 aa20.87■□□□□ 0.93
CCDC43-203ENST00000588210 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
CCDC43-203ENST00000588210 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
CCDC43-203ENST00000588210 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
CCDC43-203ENST00000588210 UBR1Q8IWV7 1749 aa20.84■□□□□ 0.93
CCDC43-203ENST00000588210 KDM5AP29375 1690 aaKnown RBP20.84■□□□□ 0.93
CCDC43-203ENST00000588210 TRPM2O94759 1503 aa20.83■□□□□ 0.92
CCDC43-203ENST00000588210 FOXD1Q16676 465 aa20.82■□□□□ 0.92
CCDC43-203ENST00000588210 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
CCDC43-203ENST00000588210 STRCQ7RTU9 1775 aa20.79■□□□□ 0.92
CCDC43-203ENST00000588210 ANKLE2Q86XL3 938 aa20.77■□□□□ 0.92
CCDC43-203ENST00000588210 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
CCDC43-203ENST00000588210 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
CCDC43-203ENST00000588210 SLIT1O75093 1534 aa20.76■□□□□ 0.91
CCDC43-203ENST00000588210 CLTCL1P53675 1640 aa20.76■□□□□ 0.91
CCDC43-203ENST00000588210 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
CCDC43-203ENST00000588210 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
CCDC43-203ENST00000588210 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms