RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 PTPRKQ15262 1439 aa21.29■■□□□ 1
DNMT1-204ENST00000585843 ERBINQ96RT1 1412 aa21.29■■□□□ 1
DNMT1-204ENST00000585843 ZMYM3Q14202 1370 aa21.29■■□□□ 1
DNMT1-204ENST00000585843 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
DNMT1-204ENST00000585843 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
DNMT1-204ENST00000585843 MROH2AA6NES4 1674 aa21.26■□□□□ 0.99
DNMT1-204ENST00000585843 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
DNMT1-204ENST00000585843 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
DNMT1-204ENST00000585843 RNF17Q9BXT8 1623 aaKnown RBP21.25■□□□□ 0.99
DNMT1-204ENST00000585843 C3P01024 1663 aa21.24■□□□□ 0.99
DNMT1-204ENST00000585843 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
DNMT1-204ENST00000585843 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
DNMT1-204ENST00000585843 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
DNMT1-204ENST00000585843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.993e-7■■■■□ 23.2
DNMT1-204ENST00000585843 KANK1Q14678 1352 aa21.19■□□□□ 0.98
DNMT1-204ENST00000585843 NPATQ14207 1427 aa21.19■□□□□ 0.98
DNMT1-204ENST00000585843 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
DNMT1-204ENST00000585843 LMTK3Q96Q04 1460 aa21.18■□□□□ 0.98
DNMT1-204ENST00000585843 ABCC3O15438 1527 aa21.17■□□□□ 0.98
DNMT1-204ENST00000585843 SETD1BQ9UPS6 1966 aaKnown RBP21.16■□□□□ 0.98
DNMT1-204ENST00000585843 UHRF1BP1Q6BDS2 1440 aa21.16■□□□□ 0.98
DNMT1-204ENST00000585843 PRDM15P57071 1507 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-204ENST00000585843 ZC3H13Q5T200 1668 aaKnown RBP21.15■□□□□ 0.98
DNMT1-204ENST00000585843 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
DNMT1-204ENST00000585843 PREX1Q8TCU6 1659 aa21.14■□□□□ 0.97
DNMT1-204ENST00000585843 PZPP20742 1482 aa21.13■□□□□ 0.97
DNMT1-204ENST00000585843 FBXO31Q5XUX0 539 aaPredicted RBP21.13■□□□□ 0.97
DNMT1-204ENST00000585843 HSPA2P54652 639 aa21.11■□□□□ 0.97
DNMT1-204ENST00000585843 CEP152O94986 1710 aa21.09■□□□□ 0.97
DNMT1-204ENST00000585843 TNRQ92752 1358 aa21.08■□□□□ 0.96
DNMT1-204ENST00000585843 CAMSAP1Q5T5Y3 1602 aa21.07■□□□□ 0.96
DNMT1-204ENST00000585843 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
DNMT1-204ENST00000585843 NAIPQ13075 1403 aa21.06■□□□□ 0.96
DNMT1-204ENST00000585843 ARHGAP31Q2M1Z3 1444 aa21.06■□□□□ 0.96
DNMT1-204ENST00000585843 LMTK2Q8IWU2 1503 aa21.06■□□□□ 0.96
DNMT1-204ENST00000585843 UNC13BO14795 1591 aa21.04■□□□□ 0.96
DNMT1-204ENST00000585843 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
DNMT1-204ENST00000585843 MYO3AQ8NEV4 1616 aa21.03■□□□□ 0.96
DNMT1-204ENST00000585843 ERVK-7P63135 1459 aa21.02■□□□□ 0.96
DNMT1-204ENST00000585843 NUP155O75694 1391 aa21.02■□□□□ 0.96
DNMT1-204ENST00000585843 SPATA31D1Q6ZQQ2 1576 aa21■□□□□ 0.95
DNMT1-204ENST00000585843 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
DNMT1-204ENST00000585843 CEP170BQ9Y4F5 1589 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-204ENST00000585843 A2ML1A8K2U0 1454 aa20.99■□□□□ 0.95
DNMT1-204ENST00000585843 NLRP1Q9C000 1473 aa20.99■□□□□ 0.95
DNMT1-204ENST00000585843 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
DNMT1-204ENST00000585843 ZNF142P52746 1687 aaPredicted RBP20.97■□□□□ 0.95
DNMT1-204ENST00000585843 IQGAP3Q86VI3 1631 aa20.96■□□□□ 0.95
DNMT1-204ENST00000585843 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
DNMT1-204ENST00000585843 TET3O43151 1660 aa20.96■□□□□ 0.95
DNMT1-204ENST00000585843 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
DNMT1-204ENST00000585843 THEMISQ8N1K5 641 aaPredicted RBP20.93■□□□□ 0.94
DNMT1-204ENST00000585843 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
DNMT1-204ENST00000585843 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
DNMT1-204ENST00000585843 NOS1P29475 1434 aa20.91■□□□□ 0.94
DNMT1-204ENST00000585843 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
DNMT1-204ENST00000585843 PLA2R1Q13018 1463 aa20.89■□□□□ 0.94
DNMT1-204ENST00000585843 STRCQ7RTU9 1775 aa20.88■□□□□ 0.93
DNMT1-204ENST00000585843 NCKAP5LQ9HCH0 1330 aa20.88■□□□□ 0.93
DNMT1-204ENST00000585843 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
DNMT1-204ENST00000585843 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
DNMT1-204ENST00000585843 PKD2Q13563 968 aa20.87■□□□□ 0.93
DNMT1-204ENST00000585843 IDI1Q13907 227 aa20.87■□□□□ 0.93
DNMT1-204ENST00000585843 E9PCH4 1651 aa20.86■□□□□ 0.93
DNMT1-204ENST00000585843 ACIN1Q9UKV3 1341 aaKnown RBP20.86■□□□□ 0.93
DNMT1-204ENST00000585843 SYNMO15061 1565 aa20.86■□□□□ 0.93
DNMT1-204ENST00000585843 STAG3Q9UJ98 1225 aa20.86■□□□□ 0.93
DNMT1-204ENST00000585843 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
DNMT1-204ENST00000585843 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
DNMT1-204ENST00000585843 PTPRTO14522 1441 aa20.83■□□□□ 0.93
DNMT1-204ENST00000585843 PIK3C2BO00750 1634 aa20.82■□□□□ 0.92
DNMT1-204ENST00000585843 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
DNMT1-204ENST00000585843 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
DNMT1-204ENST00000585843 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
DNMT1-204ENST00000585843 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
DNMT1-204ENST00000585843 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.91
DNMT1-204ENST00000585843 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
DNMT1-204ENST00000585843 TXNDC2Q86VQ3 553 aa20.76■□□□□ 0.91
DNMT1-204ENST00000585843 ADGRB3O60242 1522 aa20.76■□□□□ 0.91
DNMT1-204ENST00000585843 TMEM2Q9UHN6 1383 aa20.75■□□□□ 0.91
DNMT1-204ENST00000585843 SLIT1O75093 1534 aa20.74■□□□□ 0.91
DNMT1-204ENST00000585843 POLR1AO95602 1720 aaPredicted RBP20.74■□□□□ 0.91
DNMT1-204ENST00000585843 ARHGAP23Q9P227 1491 aa20.74■□□□□ 0.91
DNMT1-204ENST00000585843 SPHKAPQ2M3C7 1700 aa20.73■□□□□ 0.91
DNMT1-204ENST00000585843 HRCP23327 699 aa20.73■□□□□ 0.91
DNMT1-204ENST00000585843 NPHP4O75161 1426 aaPredicted RBP20.72■□□□□ 0.91
DNMT1-204ENST00000585843 LTKP29376 864 aa20.72■□□□□ 0.91
DNMT1-204ENST00000585843 MED14O60244 1454 aa20.72■□□□□ 0.91
DNMT1-204ENST00000585843 SCAF11Q99590 1463 aaKnown RBP20.72■□□□□ 0.91
DNMT1-204ENST00000585843 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
DNMT1-204ENST00000585843 TRPM2O94759 1503 aa20.7■□□□□ 0.9
DNMT1-204ENST00000585843 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
DNMT1-204ENST00000585843 FOXD1Q16676 465 aa20.7■□□□□ 0.9
DNMT1-204ENST00000585843 TMEM131LA2VDJ0 1609 aa20.7■□□□□ 0.9
DNMT1-204ENST00000585843 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
DNMT1-204ENST00000585843 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.65■□□□□ 0.9
DNMT1-204ENST00000585843 IQGAP1P46940 1657 aa20.64■□□□□ 0.9
DNMT1-204ENST00000585843 ZNF335Q9H4Z2 1342 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-204ENST00000585843 PPP1R15AO75807 674 aaPredicted RBP20.64■□□□□ 0.89
DNMT1-204ENST00000585843 TRIM26Q12899 539 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms