RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
CDK5RAP3-236ENST00000584991 DHX29Q7Z478 1369 aaKnown RBP21.53■■□□□ 1.04
CDK5RAP3-236ENST00000584991 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
CDK5RAP3-236ENST00000584991 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
CDK5RAP3-236ENST00000584991 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CDK5RAP3-236ENST00000584991 MIER1Q8N108 512 aa21.52■■□□□ 1.04
CDK5RAP3-236ENST00000584991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.032e-7■■□□□ 13.2
CDK5RAP3-236ENST00000584991 A2MP01023 1474 aa21.5■■□□□ 1.03
CDK5RAP3-236ENST00000584991 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
CDK5RAP3-236ENST00000584991 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
CDK5RAP3-236ENST00000584991 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
CDK5RAP3-236ENST00000584991 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
CDK5RAP3-236ENST00000584991 PKD2Q13563 968 aa21.47■■□□□ 1.03
CDK5RAP3-236ENST00000584991 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
CDK5RAP3-236ENST00000584991 COL17A1Q9UMD9 1497 aaPredicted RBP21.47■■□□□ 1.03
CDK5RAP3-236ENST00000584991 KIF3BO15066 747 aa21.47■■□□□ 1.03
CDK5RAP3-236ENST00000584991 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
CDK5RAP3-236ENST00000584991 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
CDK5RAP3-236ENST00000584991 DEPDC5O75140 1603 aa21.45■■□□□ 1.02
CDK5RAP3-236ENST00000584991 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
CDK5RAP3-236ENST00000584991 TIMELESSQ9UNS1 1208 aa21.42■■□□□ 1.02
CDK5RAP3-236ENST00000584991 MROH1Q8NDA8 1641 aa21.39■■□□□ 1.02
CDK5RAP3-236ENST00000584991 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
CDK5RAP3-236ENST00000584991 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-236ENST00000584991 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP3-236ENST00000584991 KANK1Q14678 1352 aa21.38■■□□□ 1.01
CDK5RAP3-236ENST00000584991 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
CDK5RAP3-236ENST00000584991 ATP10AO60312 1499 aa21.36■■□□□ 1.01
CDK5RAP3-236ENST00000584991 TONSLQ96HA7 1378 aa21.35■■□□□ 1.01
CDK5RAP3-236ENST00000584991 GGT6Q6P531 493 aa21.34■■□□□ 1.01
CDK5RAP3-236ENST00000584991 RPRD2Q5VT52 1461 aaKnown RBP21.33■■□□□ 1
CDK5RAP3-236ENST00000584991 TET3O43151 1660 aa21.32■■□□□ 1
CDK5RAP3-236ENST00000584991 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
CDK5RAP3-236ENST00000584991 E9PCH4 1651 aa21.31■■□□□ 1
CDK5RAP3-236ENST00000584991 CEP152O94986 1710 aa21.31■■□□□ 1
CDK5RAP3-236ENST00000584991 REREQ9P2R6 1566 aa21.3■■□□□ 1
CDK5RAP3-236ENST00000584991 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
CDK5RAP3-236ENST00000584991 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
CDK5RAP3-236ENST00000584991 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
CDK5RAP3-236ENST00000584991 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
CDK5RAP3-236ENST00000584991 SIGLEC1Q9BZZ2 1709 aa21.26■□□□□ 0.99
CDK5RAP3-236ENST00000584991 AGLP35573 1532 aa21.25■□□□□ 0.99
CDK5RAP3-236ENST00000584991 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
CDK5RAP3-236ENST00000584991 EFCAB6Q5THR3 1501 aa21.23■□□□□ 0.99
CDK5RAP3-236ENST00000584991 ABCC3O15438 1527 aa21.23■□□□□ 0.99
CDK5RAP3-236ENST00000584991 L3MBTL2Q969R5 705 aa21.22■□□□□ 0.99
CDK5RAP3-236ENST00000584991 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
CDK5RAP3-236ENST00000584991 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
CDK5RAP3-236ENST00000584991 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
CDK5RAP3-236ENST00000584991 ZC3H13Q5T200 1668 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-236ENST00000584991 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-236ENST00000584991 PTPRTO14522 1441 aa21.18■□□□□ 0.98
CDK5RAP3-236ENST00000584991 TRPM2O94759 1503 aa21.17■□□□□ 0.98
CDK5RAP3-236ENST00000584991 MLECQ14165 292 aa21.15■□□□□ 0.98
CDK5RAP3-236ENST00000584991 NPATQ14207 1427 aa21.15■□□□□ 0.98
CDK5RAP3-236ENST00000584991 ARID4BQ4LE39 1312 aaPredicted RBP21.13■□□□□ 0.97
CDK5RAP3-236ENST00000584991 CLTCL1P53675 1640 aa21.12■□□□□ 0.97
CDK5RAP3-236ENST00000584991 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
CDK5RAP3-236ENST00000584991 CLTCQ00610 1675 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-236ENST00000584991 ARHGAP31Q2M1Z3 1444 aa21.1■□□□□ 0.97
CDK5RAP3-236ENST00000584991 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
CDK5RAP3-236ENST00000584991 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.97
CDK5RAP3-236ENST00000584991 NBPF8Q3BBV2 869 aa21.07■□□□□ 0.96
CDK5RAP3-236ENST00000584991 DCAF11Q8TEB1 546 aa21.06■□□□□ 0.96
CDK5RAP3-236ENST00000584991 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
CDK5RAP3-236ENST00000584991 KDM2AQ9Y2K7 1162 aa21.05■□□□□ 0.96
CDK5RAP3-236ENST00000584991 KIF1BO60333 1816 aa21.05■□□□□ 0.96
CDK5RAP3-236ENST00000584991 NOS1P29475 1434 aa21.05■□□□□ 0.96
CDK5RAP3-236ENST00000584991 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
CDK5RAP3-236ENST00000584991 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-236ENST00000584991 PREX1Q8TCU6 1659 aa21.03■□□□□ 0.96
CDK5RAP3-236ENST00000584991 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-236ENST00000584991 SYNMO15061 1565 aa21.02■□□□□ 0.96
CDK5RAP3-236ENST00000584991 FBXO31Q5XUX0 539 aaPredicted RBP20.99■□□□□ 0.95
CDK5RAP3-236ENST00000584991 UHRF1BP1Q6BDS2 1440 aa20.99■□□□□ 0.95
CDK5RAP3-236ENST00000584991 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
CDK5RAP3-236ENST00000584991 PIK3C2BO00750 1634 aa20.98■□□□□ 0.95
CDK5RAP3-236ENST00000584991 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
CDK5RAP3-236ENST00000584991 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
CDK5RAP3-236ENST00000584991 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
CDK5RAP3-236ENST00000584991 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
CDK5RAP3-236ENST00000584991 ADGRB3O60242 1522 aa20.94■□□□□ 0.94
CDK5RAP3-236ENST00000584991 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
CDK5RAP3-236ENST00000584991 IDI1Q13907 227 aa20.93■□□□□ 0.94
CDK5RAP3-236ENST00000584991 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
CDK5RAP3-236ENST00000584991 CCER2I3L3R5 266 aa20.92■□□□□ 0.94
CDK5RAP3-236ENST00000584991 SPATA31D1Q6ZQQ2 1576 aa20.92■□□□□ 0.94
CDK5RAP3-236ENST00000584991 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
CDK5RAP3-236ENST00000584991 HIRIP3Q9BW71 556 aaPredicted RBP20.91■□□□□ 0.94
CDK5RAP3-236ENST00000584991 RALGAPBQ86X10 1494 aa20.9■□□□□ 0.94
CDK5RAP3-236ENST00000584991 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
CDK5RAP3-236ENST00000584991 TRPM1Q7Z4N2 1603 aa20.89■□□□□ 0.93
CDK5RAP3-236ENST00000584991 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
CDK5RAP3-236ENST00000584991 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
CDK5RAP3-236ENST00000584991 MYT1Q01538 1121 aa20.88■□□□□ 0.93
CDK5RAP3-236ENST00000584991 MADDQ8WXG6 1647 aa20.87■□□□□ 0.93
CDK5RAP3-236ENST00000584991 EIF4G2P78344 907 aaKnown RBP eCLIP20.87■□□□□ 0.93
CDK5RAP3-236ENST00000584991 HSPA5P11021 654 aaKnown RBP20.86■□□□□ 0.93
CDK5RAP3-236ENST00000584991 DDX10Q13206 875 aaKnown RBP20.86■□□□□ 0.93
CDK5RAP3-236ENST00000584991 PPLO60437 1756 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms