RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ABCA6Q8N139 1617 aa20.41■□□□□ 0.86
UBBP4-202ENST00000584755 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
UBBP4-202ENST00000584755 SIN3AQ96ST3 1273 aa20.4■□□□□ 0.86
UBBP4-202ENST00000584755 A2MP01023 1474 aa20.39■□□□□ 0.85
UBBP4-202ENST00000584755 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
UBBP4-202ENST00000584755 DIP2CQ9Y2E4 1556 aa20.38■□□□□ 0.85
UBBP4-202ENST00000584755 MYT1LQ9UL68 1186 aa20.36■□□□□ 0.85
UBBP4-202ENST00000584755 VWDEQ8N2E2 1590 aa20.36■□□□□ 0.85
UBBP4-202ENST00000584755 PKD2Q13563 968 aa20.35■□□□□ 0.85
UBBP4-202ENST00000584755 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
UBBP4-202ENST00000584755 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
UBBP4-202ENST00000584755 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
UBBP4-202ENST00000584755 FOXD1Q16676 465 aa20.33■□□□□ 0.85
UBBP4-202ENST00000584755 COL17A1Q9UMD9 1497 aaPredicted RBP20.32■□□□□ 0.84
UBBP4-202ENST00000584755 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
UBBP4-202ENST00000584755 YEATS2Q9ULM3 1422 aa20.31■□□□□ 0.84
UBBP4-202ENST00000584755 RPRD2Q5VT52 1461 aaKnown RBP20.31■□□□□ 0.84
UBBP4-202ENST00000584755 KIF3BO15066 747 aa20.29■□□□□ 0.84
UBBP4-202ENST00000584755 REREQ9P2R6 1566 aa20.29■□□□□ 0.84
UBBP4-202ENST00000584755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.842e-6■□□□□ 10.9
UBBP4-202ENST00000584755 TET3O43151 1660 aa20.27■□□□□ 0.83
UBBP4-202ENST00000584755 KANK1Q14678 1352 aa20.26■□□□□ 0.83
UBBP4-202ENST00000584755 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
UBBP4-202ENST00000584755 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
UBBP4-202ENST00000584755 ATP10AO60312 1499 aa20.26■□□□□ 0.83
UBBP4-202ENST00000584755 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
UBBP4-202ENST00000584755 PLA2R1Q13018 1463 aa20.23■□□□□ 0.83
UBBP4-202ENST00000584755 E9PCH4 1651 aa20.23■□□□□ 0.83
UBBP4-202ENST00000584755 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
UBBP4-202ENST00000584755 AGLP35573 1532 aa20.21■□□□□ 0.83
UBBP4-202ENST00000584755 EFCAB6Q5THR3 1501 aa20.19■□□□□ 0.82
UBBP4-202ENST00000584755 PTPRTO14522 1441 aa20.18■□□□□ 0.82
UBBP4-202ENST00000584755 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
UBBP4-202ENST00000584755 CEP152O94986 1710 aa20.16■□□□□ 0.82
UBBP4-202ENST00000584755 ABCC3O15438 1527 aa20.16■□□□□ 0.82
UBBP4-202ENST00000584755 TRPM2O94759 1503 aa20.15■□□□□ 0.82
UBBP4-202ENST00000584755 ZC3H13Q5T200 1668 aaKnown RBP20.15■□□□□ 0.82
UBBP4-202ENST00000584755 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.81
UBBP4-202ENST00000584755 CCDC144AA2RUR9 1427 aa20.14■□□□□ 0.81
UBBP4-202ENST00000584755 SPHKAPQ2M3C7 1700 aa20.14■□□□□ 0.81
UBBP4-202ENST00000584755 SIGLEC1Q9BZZ2 1709 aa20.13■□□□□ 0.81
UBBP4-202ENST00000584755 GGT6Q6P531 493 aa20.12■□□□□ 0.81
UBBP4-202ENST00000584755 CAMSAP1Q5T5Y3 1602 aa20.1■□□□□ 0.81
UBBP4-202ENST00000584755 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
UBBP4-202ENST00000584755 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
UBBP4-202ENST00000584755 NPATQ14207 1427 aa20.08■□□□□ 0.8
UBBP4-202ENST00000584755 WASHC2CQ9Y4E1 1318 aa20.07■□□□□ 0.8
UBBP4-202ENST00000584755 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
UBBP4-202ENST00000584755 ZNF316A6NFI3 1004 aaPredicted RBP20.05■□□□□ 0.8
UBBP4-202ENST00000584755 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
UBBP4-202ENST00000584755 SPATA31E1Q6ZUB1 1445 aa20.04■□□□□ 0.8
UBBP4-202ENST00000584755 UHRF1BP1Q6BDS2 1440 aa20.03■□□□□ 0.8
UBBP4-202ENST00000584755 CNTLNQ9NXG0 1405 aa20.02■□□□□ 0.8
UBBP4-202ENST00000584755 NOS1P29475 1434 aa20.02■□□□□ 0.79
UBBP4-202ENST00000584755 NBPF8Q3BBV2 869 aa19.99■□□□□ 0.79
UBBP4-202ENST00000584755 UGGT1Q9NYU2 1555 aa19.96■□□□□ 0.79
UBBP4-202ENST00000584755 PIK3C2BO00750 1634 aa19.96■□□□□ 0.79
UBBP4-202ENST00000584755 SYNMO15061 1565 aa19.96■□□□□ 0.79
UBBP4-202ENST00000584755 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
UBBP4-202ENST00000584755 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
UBBP4-202ENST00000584755 KIF1BO60333 1816 aa19.93■□□□□ 0.78
UBBP4-202ENST00000584755 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
UBBP4-202ENST00000584755 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
UBBP4-202ENST00000584755 RALGAPBQ86X10 1494 aa19.92■□□□□ 0.78
UBBP4-202ENST00000584755 STAC3Q96MF2 364 aa19.92■□□□□ 0.78
UBBP4-202ENST00000584755 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
UBBP4-202ENST00000584755 RGL3Q3MIN7 710 aa19.91■□□□□ 0.78
UBBP4-202ENST00000584755 CFAP65Q6ZU64 1925 aaKnown RBP19.91■□□□□ 0.78
UBBP4-202ENST00000584755 ERVK-7P63135 1459 aa19.91■□□□□ 0.78
UBBP4-202ENST00000584755 SPATA31D1Q6ZQQ2 1576 aa19.89■□□□□ 0.77
UBBP4-202ENST00000584755 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
UBBP4-202ENST00000584755 MLECQ14165 292 aa19.88■□□□□ 0.77
UBBP4-202ENST00000584755 IFT172Q9UG01 1749 aa19.87■□□□□ 0.77
UBBP4-202ENST00000584755 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
UBBP4-202ENST00000584755 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
UBBP4-202ENST00000584755 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
UBBP4-202ENST00000584755 KDM2AQ9Y2K7 1162 aa19.86■□□□□ 0.77
UBBP4-202ENST00000584755 MYOM2P54296 1465 aa19.85■□□□□ 0.77
UBBP4-202ENST00000584755 MADDQ8WXG6 1647 aa19.85■□□□□ 0.77
UBBP4-202ENST00000584755 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
UBBP4-202ENST00000584755 GPRASP1Q5JY77 1395 aa19.82■□□□□ 0.76
UBBP4-202ENST00000584755 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
UBBP4-202ENST00000584755 FBXO31Q5XUX0 539 aaPredicted RBP19.82■□□□□ 0.76
UBBP4-202ENST00000584755 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
UBBP4-202ENST00000584755 IDI1Q13907 227 aa19.81■□□□□ 0.76
UBBP4-202ENST00000584755 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
UBBP4-202ENST00000584755 LAMC1P11047 1609 aa19.81■□□□□ 0.76
UBBP4-202ENST00000584755 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
UBBP4-202ENST00000584755 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
UBBP4-202ENST00000584755 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
UBBP4-202ENST00000584755 HSPA5P11021 654 aaKnown RBP19.79■□□□□ 0.76
UBBP4-202ENST00000584755 PPLO60437 1756 aa19.79■□□□□ 0.76
UBBP4-202ENST00000584755 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
UBBP4-202ENST00000584755 FER1L4A9Z1Z3 1794 aa19.77■□□□□ 0.76
UBBP4-202ENST00000584755 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
UBBP4-202ENST00000584755 NEXMIFQ5QGS0 1516 aa19.76■□□□□ 0.75
UBBP4-202ENST00000584755 ROCK2O75116 1388 aaKnown RBP19.76■□□□□ 0.75
UBBP4-202ENST00000584755 USP47Q96K76 1375 aa19.75■□□□□ 0.75
UBBP4-202ENST00000584755 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
UBBP4-202ENST00000584755 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 393.1 ms