RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
ERBB2-218ENST00000584450 CFAP53Q96M91 514 aa15.57■□□□□ 0.08
ERBB2-218ENST00000584450 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
ERBB2-218ENST00000584450 SOX12O15370 315 aa15.56■□□□□ 0.08
ERBB2-218ENST00000584450 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
ERBB2-218ENST00000584450 CLUAP1Q96AJ1 413 aa15.55■□□□□ 0.08
ERBB2-218ENST00000584450 WASHC2CQ9Y4E1 1318 aa15.54■□□□□ 0.08
ERBB2-218ENST00000584450 APAF1O14727 1248 aa15.54■□□□□ 0.08
ERBB2-218ENST00000584450 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-218ENST00000584450 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
ERBB2-218ENST00000584450 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.08
ERBB2-218ENST00000584450 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
ERBB2-218ENST00000584450 CFAP70Q5T0N1 1121 aa15.54■□□□□ 0.08
ERBB2-218ENST00000584450 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
ERBB2-218ENST00000584450 NCOA1Q15788 1441 aa15.53■□□□□ 0.08
ERBB2-218ENST00000584450 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
ERBB2-218ENST00000584450 ADAMTS8Q9UP79 889 aa15.53■□□□□ 0.08
ERBB2-218ENST00000584450 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
ERBB2-218ENST00000584450 CRBNQ96SW2 442 aa15.52■□□□□ 0.08
ERBB2-218ENST00000584450 UPF2Q9HAU5 1272 aaKnown RBP15.52■□□□□ 0.07
ERBB2-218ENST00000584450 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
ERBB2-218ENST00000584450 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
ERBB2-218ENST00000584450 CAMSAP2Q08AD1 1489 aa15.5■□□□□ 0.07
ERBB2-218ENST00000584450 ARHGAP5Q13017 1502 aa15.49■□□□□ 0.07
ERBB2-218ENST00000584450 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
ERBB2-218ENST00000584450 ROCK1Q13464 1354 aa15.49■□□□□ 0.07
ERBB2-218ENST00000584450 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
ERBB2-218ENST00000584450 MAPK8IP3Q9UPT6 1336 aa15.48■□□□□ 0.07
ERBB2-218ENST00000584450 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
ERBB2-218ENST00000584450 UGGT2Q9NYU1 1516 aa15.47■□□□□ 0.07
ERBB2-218ENST00000584450 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
ERBB2-218ENST00000584450 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
ERBB2-218ENST00000584450 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
ERBB2-218ENST00000584450 RTN4Q9NQC3 1192 aaKnown RBP15.46■□□□□ 0.07
ERBB2-218ENST00000584450 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
ERBB2-218ENST00000584450 DEKP35659 375 aaKnown RBP15.46■□□□□ 0.07
ERBB2-218ENST00000584450 NUP153P49790 1475 aaKnown RBP15.46■□□□□ 0.06
ERBB2-218ENST00000584450 C14orf37Q86TY3 774 aa15.45■□□□□ 0.06
ERBB2-218ENST00000584450 RPRD2Q5VT52 1461 aaKnown RBP15.45■□□□□ 0.06
ERBB2-218ENST00000584450 PDE3BQ13370 1112 aa15.45■□□□□ 0.06
ERBB2-218ENST00000584450 SPRYD3Q8NCJ5 442 aa15.44■□□□□ 0.06
ERBB2-218ENST00000584450 GPATCH8Q9UKJ3 1502 aaKnown RBP15.44■□□□□ 0.06
ERBB2-218ENST00000584450 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-218ENST00000584450 PDE4AP27815 886 aa15.43■□□□□ 0.06
ERBB2-218ENST00000584450 TCERG1O14776 1098 aaKnown RBP15.42■□□□□ 0.06
ERBB2-218ENST00000584450 IPO9Q96P70 1041 aaKnown RBP15.42■□□□□ 0.06
ERBB2-218ENST00000584450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.42■□□□□ 0.06
ERBB2-218ENST00000584450 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
ERBB2-218ENST00000584450 COG6Q9Y2V7 657 aa15.41■□□□□ 0.06
ERBB2-218ENST00000584450 MINK1Q8N4C8 1332 aaPredicted RBP15.4■□□□□ 0.06
ERBB2-218ENST00000584450 SCAPERQ9BY12 1400 aa15.4■□□□□ 0.06
ERBB2-218ENST00000584450 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
ERBB2-218ENST00000584450 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
ERBB2-218ENST00000584450 CFAP43Q8NDM7 1665 aa15.4■□□□□ 0.06
ERBB2-218ENST00000584450 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
ERBB2-218ENST00000584450 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
ERBB2-218ENST00000584450 MSH5O43196 834 aa15.39■□□□□ 0.05
ERBB2-218ENST00000584450 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-218ENST00000584450 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
ERBB2-218ENST00000584450 EIF3AQ14152 1382 aaKnown RBP15.37■□□□□ 0.05
ERBB2-218ENST00000584450 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
ERBB2-218ENST00000584450 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
ERBB2-218ENST00000584450 RAPGEF3O95398 923 aa15.37■□□□□ 0.05
ERBB2-218ENST00000584450 FANCIQ9NVI1 1328 aa15.36■□□□□ 0.05
ERBB2-218ENST00000584450 ATP10BO94823 1461 aa15.36■□□□□ 0.05
ERBB2-218ENST00000584450 CABP2Q9NPB3 220 aa15.36■□□□□ 0.05
ERBB2-218ENST00000584450 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
ERBB2-218ENST00000584450 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
ERBB2-218ENST00000584450 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
ERBB2-218ENST00000584450 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
ERBB2-218ENST00000584450 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
ERBB2-218ENST00000584450 APBB1O00213 710 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 BCAR3O75815 825 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 PANK1Q8TE04 598 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 MTHFSP49914 203 aa15.32■□□□□ 0.04
ERBB2-218ENST00000584450 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
ERBB2-218ENST00000584450 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
ERBB2-218ENST00000584450 DISP1Q96F81 1524 aa15.31■□□□□ 0.04
ERBB2-218ENST00000584450 WDR62O43379 1518 aa15.3■□□□□ 0.04
ERBB2-218ENST00000584450 CCDC141Q6ZP82 1450 aa15.3■□□□□ 0.04
ERBB2-218ENST00000584450 BECN1Q14457 450 aa15.3■□□□□ 0.04
ERBB2-218ENST00000584450 KDM6BO15054 1643 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
ERBB2-218ENST00000584450 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
ERBB2-218ENST00000584450 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 DISP3Q9P2K9 1392 aa15.29■□□□□ 0.04
ERBB2-218ENST00000584450 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
ERBB2-218ENST00000584450 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
ERBB2-218ENST00000584450 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
ERBB2-218ENST00000584450 E9PSI1 815 aa15.27■□□□□ 0.04
ERBB2-218ENST00000584450 ADGRF5Q8IZF2 1346 aa15.27■□□□□ 0.03
ERBB2-218ENST00000584450 CGNL1Q0VF96 1302 aa15.27■□□□□ 0.03
ERBB2-218ENST00000584450 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
ERBB2-218ENST00000584450 TERF2IPQ9NYB0 399 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms