RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 NUP153P49790 1475 aaKnown RBP12.67□□□□□ -0.38
PPP4R1-222ENST00000582594 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
PPP4R1-222ENST00000582594 NUP155O75694 1391 aa12.66□□□□□ -0.38
PPP4R1-222ENST00000582594 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
PPP4R1-222ENST00000582594 MS4A1P11836 297 aa12.66□□□□□ -0.38
PPP4R1-222ENST00000582594 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-222ENST00000582594 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
PPP4R1-222ENST00000582594 USP35Q9P2H5 1018 aa12.64□□□□□ -0.39
PPP4R1-222ENST00000582594 ADAMTS12P58397 1594 aa12.64□□□□□ -0.39
PPP4R1-222ENST00000582594 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-222ENST00000582594 ADGBQ8N7X0 1667 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 UHRF1BP1Q6BDS2 1440 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
PPP4R1-222ENST00000582594 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
PPP4R1-222ENST00000582594 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
PPP4R1-222ENST00000582594 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
PPP4R1-222ENST00000582594 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
PPP4R1-222ENST00000582594 GPATCH8Q9UKJ3 1502 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-222ENST00000582594 WASHC2CQ9Y4E1 1318 aa12.61□□□□□ -0.39
PPP4R1-222ENST00000582594 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
PPP4R1-222ENST00000582594 RGL3Q3MIN7 710 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 TROQ12816 1431 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 E9PCH4 1651 aa12.6□□□□□ -0.39
PPP4R1-222ENST00000582594 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
PPP4R1-222ENST00000582594 GSE1Q14687 1217 aa12.58□□□□□ -0.4
PPP4R1-222ENST00000582594 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
PPP4R1-222ENST00000582594 ADGRL2O95490 1459 aa12.58□□□□□ -0.4
PPP4R1-222ENST00000582594 CROCC2H7BZ55 1655 aa12.57□□□□□ -0.4
PPP4R1-222ENST00000582594 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-222ENST00000582594 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
PPP4R1-222ENST00000582594 ITSN2Q9NZM3 1697 aa12.57□□□□□ -0.4
PPP4R1-222ENST00000582594 PLB1Q6P1J6 1458 aa12.57□□□□□ -0.4
PPP4R1-222ENST00000582594 PANK3Q9H999 370 aa12.56□□□□□ -0.4
PPP4R1-222ENST00000582594 ARHGEF12Q9NZN5 1544 aa12.56□□□□□ -0.4
PPP4R1-222ENST00000582594 NUP160Q12769 1436 aa12.55□□□□□ -0.4
PPP4R1-222ENST00000582594 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-222ENST00000582594 RGS3P49796 1198 aa12.54□□□□□ -0.4
PPP4R1-222ENST00000582594 HNRNPMP52272 730 aaKnown RBP eCLIP12.54□□□□□ -0.42e-7■■■■□ 24.6
PPP4R1-222ENST00000582594 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
PPP4R1-222ENST00000582594 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
PPP4R1-222ENST00000582594 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
PPP4R1-222ENST00000582594 DISP3Q9P2K9 1392 aa12.53□□□□□ -0.4
PPP4R1-222ENST00000582594 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
PPP4R1-222ENST00000582594 CEP170Q5SW79 1584 aa12.52□□□□□ -0.41
PPP4R1-222ENST00000582594 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
PPP4R1-222ENST00000582594 BLMP54132 1417 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-222ENST00000582594 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-222ENST00000582594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPP4R1-222ENST00000582594 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
PPP4R1-222ENST00000582594 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
PPP4R1-222ENST00000582594 FBLN2P98095 1184 aa12.5□□□□□ -0.41
PPP4R1-222ENST00000582594 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-222ENST00000582594 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
PPP4R1-222ENST00000582594 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
PPP4R1-222ENST00000582594 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
PPP4R1-222ENST00000582594 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
PPP4R1-222ENST00000582594 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
PPP4R1-222ENST00000582594 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
PPP4R1-222ENST00000582594 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 TESK2Q96S53 571 aa12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 PLEKHH1Q9ULM0 1364 aa12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 WDR43Q15061 677 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 DUSP27Q5VZP5 1158 aa12.48□□□□□ -0.41
PPP4R1-222ENST00000582594 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-222ENST00000582594 ADCY10Q96PN6 1610 aa12.47□□□□□ -0.41
PPP4R1-222ENST00000582594 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
PPP4R1-222ENST00000582594 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
PPP4R1-222ENST00000582594 TMF1P82094 1093 aa12.46□□□□□ -0.42
PPP4R1-222ENST00000582594 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.42
PPP4R1-222ENST00000582594 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
PPP4R1-222ENST00000582594 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 PTPRGP23470 1445 aa12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 PPP2R1AP30153 589 aa12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 A2MP01023 1474 aa12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 SHANK2Q9UPX8 1470 aa12.44□□□□□ -0.42
PPP4R1-222ENST00000582594 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
PPP4R1-222ENST00000582594 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
PPP4R1-222ENST00000582594 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
PPP4R1-222ENST00000582594 BCAR3O75815 825 aa12.42□□□□□ -0.42
PPP4R1-222ENST00000582594 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
PPP4R1-222ENST00000582594 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-222ENST00000582594 ABCC10Q5T3U5 1492 aa12.41□□□□□ -0.42
PPP4R1-222ENST00000582594 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
PPP4R1-222ENST00000582594 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
PPP4R1-222ENST00000582594 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
PPP4R1-222ENST00000582594 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-222ENST00000582594 INSRP06213 1382 aa12.4□□□□□ -0.42
PPP4R1-222ENST00000582594 IGHDP01880 384 aa12.4□□□□□ -0.42
PPP4R1-222ENST00000582594 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.43
PPP4R1-222ENST00000582594 SLFN5Q08AF3 891 aa12.39□□□□□ -0.43
PPP4R1-222ENST00000582594 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms