RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 TCOF1Q13428 1488 aaKnown RBP10.29□□□□□ -0.76
NDEL1-213ENST00000582490 ZMYM3Q14202 1370 aa10.28□□□□□ -0.76
NDEL1-213ENST00000582490 PRKAR2AP13861 404 aaKnown RBP10.28□□□□□ -0.76
NDEL1-213ENST00000582490 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
NDEL1-213ENST00000582490 KIDINS220Q9ULH0 1771 aa10.27□□□□□ -0.77
NDEL1-213ENST00000582490 TOM1O60784 492 aa10.27□□□□□ -0.77
NDEL1-213ENST00000582490 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
NDEL1-213ENST00000582490 CLTCQ00610 1675 aaKnown RBP10.26□□□□□ -0.77
NDEL1-213ENST00000582490 CDC42BPBQ9Y5S2 1711 aa10.26□□□□□ -0.77
NDEL1-213ENST00000582490 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
NDEL1-213ENST00000582490 MYO3AQ8NEV4 1616 aa10.25□□□□□ -0.77
NDEL1-213ENST00000582490 PKD2Q13563 968 aa10.25□□□□□ -0.77
NDEL1-213ENST00000582490 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
NDEL1-213ENST00000582490 ZNF142P52746 1687 aaPredicted RBP10.25□□□□□ -0.77
NDEL1-213ENST00000582490 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
NDEL1-213ENST00000582490 REREQ9P2R6 1566 aa10.24□□□□□ -0.77
NDEL1-213ENST00000582490 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
NDEL1-213ENST00000582490 ESF1Q9H501 851 aaKnown RBP10.24□□□□□ -0.77
NDEL1-213ENST00000582490 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
NDEL1-213ENST00000582490 AGLP35573 1532 aa10.23□□□□□ -0.77
NDEL1-213ENST00000582490 PTPRKQ15262 1439 aa10.23□□□□□ -0.77
NDEL1-213ENST00000582490 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
NDEL1-213ENST00000582490 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
NDEL1-213ENST00000582490 NPATQ14207 1427 aa10.22□□□□□ -0.77
NDEL1-213ENST00000582490 PLA2R1Q13018 1463 aa10.22□□□□□ -0.77
NDEL1-213ENST00000582490 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
NDEL1-213ENST00000582490 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
NDEL1-213ENST00000582490 SLC24A1O60721 1099 aa10.21□□□□□ -0.77
NDEL1-213ENST00000582490 ATP1B4Q9UN42 357 aaPredicted RBP10.21□□□□□ -0.77
NDEL1-213ENST00000582490 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.78
NDEL1-213ENST00000582490 ARHGAP5Q13017 1502 aa10.21□□□□□ -0.78
NDEL1-213ENST00000582490 LRRIQ1Q96JM4 1722 aa10.21□□□□□ -0.78
NDEL1-213ENST00000582490 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
NDEL1-213ENST00000582490 FBXO31Q5XUX0 539 aaPredicted RBP10.2□□□□□ -0.78
NDEL1-213ENST00000582490 EVX2Q03828 476 aa10.19□□□□□ -0.78
NDEL1-213ENST00000582490 XIRP1Q702N8 1843 aaKnown RBP10.19□□□□□ -0.78
NDEL1-213ENST00000582490 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
NDEL1-213ENST00000582490 CNTLNQ9NXG0 1405 aa10.18□□□□□ -0.78
NDEL1-213ENST00000582490 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
NDEL1-213ENST00000582490 CPS1P31327 1500 aa10.17□□□□□ -0.78
NDEL1-213ENST00000582490 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
NDEL1-213ENST00000582490 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
NDEL1-213ENST00000582490 GGT6Q6P531 493 aa10.16□□□□□ -0.78
NDEL1-213ENST00000582490 LRRC7Q96NW7 1537 aa10.16□□□□□ -0.78
NDEL1-213ENST00000582490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.15□□□□□ -0.78
NDEL1-213ENST00000582490 ABCC1P33527 1531 aa10.15□□□□□ -0.78
NDEL1-213ENST00000582490 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
NDEL1-213ENST00000582490 A2ML1A8K2U0 1454 aa10.14□□□□□ -0.79
NDEL1-213ENST00000582490 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
NDEL1-213ENST00000582490 CFAP65Q6ZU64 1925 aaKnown RBP10.13□□□□□ -0.79
NDEL1-213ENST00000582490 CDC42BPAQ5VT25 1732 aa10.12□□□□□ -0.79
NDEL1-213ENST00000582490 TROQ12816 1431 aaPredicted RBP10.11□□□□□ -0.79
NDEL1-213ENST00000582490 RBM33Q96EV2 1170 aaKnown RBP10.11□□□□□ -0.79
NDEL1-213ENST00000582490 PREX2Q70Z35 1606 aa10.11□□□□□ -0.79
NDEL1-213ENST00000582490 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
NDEL1-213ENST00000582490 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
NDEL1-213ENST00000582490 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
NDEL1-213ENST00000582490 NPHP4O75161 1426 aaPredicted RBP10.09□□□□□ -0.79
NDEL1-213ENST00000582490 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
NDEL1-213ENST00000582490 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
NDEL1-213ENST00000582490 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
NDEL1-213ENST00000582490 IQGAP1P46940 1657 aa10.07□□□□□ -0.8
NDEL1-213ENST00000582490 TNRQ92752 1358 aa10.07□□□□□ -0.8
NDEL1-213ENST00000582490 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
NDEL1-213ENST00000582490 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
NDEL1-213ENST00000582490 A2MP01023 1474 aa10.06□□□□□ -0.8
NDEL1-213ENST00000582490 ZC3H13Q5T200 1668 aaKnown RBP10.06□□□□□ -0.8
NDEL1-213ENST00000582490 MED14O60244 1454 aa10.05□□□□□ -0.8
NDEL1-213ENST00000582490 ATP7AQ04656 1500 aa10.04□□□□□ -0.8
NDEL1-213ENST00000582490 ROBO1Q9Y6N7 1651 aa10.04□□□□□ -0.8
NDEL1-213ENST00000582490 DEPDC5O75140 1603 aa10.04□□□□□ -0.8
NDEL1-213ENST00000582490 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
NDEL1-213ENST00000582490 LRP6O75581 1613 aa10.03□□□□□ -0.8
NDEL1-213ENST00000582490 ARHGAP35Q9NRY4 1499 aa10.03□□□□□ -0.8
NDEL1-213ENST00000582490 ZNF644Q9H582 1327 aaPredicted RBP10.03□□□□□ -0.8
NDEL1-213ENST00000582490 LTKP29376 864 aa10.02□□□□□ -0.81
NDEL1-213ENST00000582490 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
NDEL1-213ENST00000582490 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
NDEL1-213ENST00000582490 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
NDEL1-213ENST00000582490 UGGT1Q9NYU2 1555 aa10.01□□□□□ -0.81
NDEL1-213ENST00000582490 SYNMO15061 1565 aa10□□□□□ -0.81
NDEL1-213ENST00000582490 MIA2Q96PC5 1412 aa9.99□□□□□ -0.81
NDEL1-213ENST00000582490 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
NDEL1-213ENST00000582490 CLIP1P30622 1438 aa9.99□□□□□ -0.81
NDEL1-213ENST00000582490 SETBP1Q9Y6X0 1596 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 SPDYE4A6NLX3 237 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 KIF3BO15066 747 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 GABBR2O75899 941 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 FARP1Q9Y4F1 1045 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-213ENST00000582490 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 PHLPP1O60346 1717 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 PZPP20742 1482 aa9.98□□□□□ -0.81
NDEL1-213ENST00000582490 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
NDEL1-213ENST00000582490 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
NDEL1-213ENST00000582490 TMEM94Q12767 1356 aa9.96□□□□□ -0.82
NDEL1-213ENST00000582490 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
NDEL1-213ENST00000582490 NCOA2Q15596 1464 aa9.95□□□□□ -0.82
NDEL1-213ENST00000582490 MAP3K1Q13233 1512 aa9.95□□□□□ -0.82
NDEL1-213ENST00000582490 UBR1Q8IWV7 1749 aa9.94□□□□□ -0.82
NDEL1-213ENST00000582490 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms