RNA–Protein interactions for RNA: ENST00000581339.1

RIOK3-206, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-206ENST00000581339 VARS2Q5ST30 1063 aaKnown RBP12.9□□□□□ -0.34
RIOK3-206ENST00000581339 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
RIOK3-206ENST00000581339 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
RIOK3-206ENST00000581339 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
RIOK3-206ENST00000581339 MAP3K7O43318 606 aa12.88□□□□□ -0.35
RIOK3-206ENST00000581339 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
RIOK3-206ENST00000581339 ADAM33Q9BZ11 813 aa12.86□□□□□ -0.35
RIOK3-206ENST00000581339 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
RIOK3-206ENST00000581339 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
RIOK3-206ENST00000581339 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
RIOK3-206ENST00000581339 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
RIOK3-206ENST00000581339 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
RIOK3-206ENST00000581339 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
RIOK3-206ENST00000581339 PTPREP23469 700 aa12.79□□□□□ -0.36
RIOK3-206ENST00000581339 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
RIOK3-206ENST00000581339 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
RIOK3-206ENST00000581339 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
RIOK3-206ENST00000581339 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
RIOK3-206ENST00000581339 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
RIOK3-206ENST00000581339 FCHSD2O94868 740 aa12.77□□□□□ -0.37
RIOK3-206ENST00000581339 KCNK17Q96T54 332 aa12.77□□□□□ -0.37
RIOK3-206ENST00000581339 PBX2P40425 430 aa12.76□□□□□ -0.37
RIOK3-206ENST00000581339 ZC3H15Q8WU90 426 aaKnown RBP12.76□□□□□ -0.37
RIOK3-206ENST00000581339 PTGDRQ13258 359 aa12.75□□□□□ -0.37
RIOK3-206ENST00000581339 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
RIOK3-206ENST00000581339 GPR37O15354 613 aa12.74□□□□□ -0.37
RIOK3-206ENST00000581339 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
RIOK3-206ENST00000581339 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
RIOK3-206ENST00000581339 ARHGAP33O14559 1287 aa12.73□□□□□ -0.37
RIOK3-206ENST00000581339 NPDC1Q9NQX5 325 aaPredicted RBP12.73□□□□□ -0.37
RIOK3-206ENST00000581339 HIC1Q14526 733 aa12.72□□□□□ -0.37
RIOK3-206ENST00000581339 COL9A1P20849 921 aa12.71□□□□□ -0.37
RIOK3-206ENST00000581339 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
RIOK3-206ENST00000581339 PSEN2P49810 448 aa12.7□□□□□ -0.38
RIOK3-206ENST00000581339 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
RIOK3-206ENST00000581339 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
RIOK3-206ENST00000581339 POTEMA6NI47 508 aa12.69□□□□□ -0.38
RIOK3-206ENST00000581339 GNPATO15228 680 aa12.68□□□□□ -0.38
RIOK3-206ENST00000581339 ZMYND10O75800 440 aa12.67□□□□□ -0.38
RIOK3-206ENST00000581339 PRSS12P56730 875 aa12.66□□□□□ -0.38
RIOK3-206ENST00000581339 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
RIOK3-206ENST00000581339 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
RIOK3-206ENST00000581339 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
RIOK3-206ENST00000581339 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
RIOK3-206ENST00000581339 DMRTA1Q5VZB9 504 aa12.63□□□□□ -0.39
RIOK3-206ENST00000581339 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
RIOK3-206ENST00000581339 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
RIOK3-206ENST00000581339 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
RIOK3-206ENST00000581339 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
RIOK3-206ENST00000581339 FECHP22830 423 aa12.61□□□□□ -0.39
RIOK3-206ENST00000581339 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
RIOK3-206ENST00000581339 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
RIOK3-206ENST00000581339 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
RIOK3-206ENST00000581339 KRI1Q8N9T8 703 aaKnown RBP12.6□□□□□ -0.39
RIOK3-206ENST00000581339 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
RIOK3-206ENST00000581339 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
RIOK3-206ENST00000581339 TRIM6-TRIM34B2RNG4 842 aa12.59□□□□□ -0.39
RIOK3-206ENST00000581339 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
RIOK3-206ENST00000581339 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
RIOK3-206ENST00000581339 TK2O00142 265 aa12.57□□□□□ -0.4
RIOK3-206ENST00000581339 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
RIOK3-206ENST00000581339 PACS2Q86VP3 889 aa12.57□□□□□ -0.4
RIOK3-206ENST00000581339 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
RIOK3-206ENST00000581339 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
RIOK3-206ENST00000581339 KRTAP3-3Q9BYR6 98 aa12.56□□□□□ -0.4
RIOK3-206ENST00000581339 KRTAP3-2Q9BYR7 98 aa12.56□□□□□ -0.4
RIOK3-206ENST00000581339 FAM198AQ9UFP1 575 aa12.56□□□□□ -0.4
RIOK3-206ENST00000581339 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
RIOK3-206ENST00000581339 IRF6O14896 467 aa12.54□□□□□ -0.4
RIOK3-206ENST00000581339 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
RIOK3-206ENST00000581339 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
RIOK3-206ENST00000581339 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
RIOK3-206ENST00000581339 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
RIOK3-206ENST00000581339 SLC24A3Q9HC58 644 aa12.53□□□□□ -0.4
RIOK3-206ENST00000581339 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
RIOK3-206ENST00000581339 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
RIOK3-206ENST00000581339 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
RIOK3-206ENST00000581339 AK7Q96M32 723 aa12.51□□□□□ -0.41
RIOK3-206ENST00000581339 NESP48681 1621 aa12.51□□□□□ -0.41
RIOK3-206ENST00000581339 OATP04181 439 aa12.5□□□□□ -0.41
RIOK3-206ENST00000581339 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
RIOK3-206ENST00000581339 ERCC6Q03468 1493 aa12.5□□□□□ -0.41
RIOK3-206ENST00000581339 HMGXB3Q12766 1538 aa12.5□□□□□ -0.41
RIOK3-206ENST00000581339 SMARCA2P51531 1590 aa12.5□□□□□ -0.41
RIOK3-206ENST00000581339 RBM46Q8TBY0 533 aaKnown RBP12.49□□□□□ -0.41
RIOK3-206ENST00000581339 TATDN2Q93075 761 aa12.49□□□□□ -0.41
RIOK3-206ENST00000581339 PNMA3Q9UL41 463 aa12.49□□□□□ -0.41
RIOK3-206ENST00000581339 CUX2O14529 1486 aa12.48□□□□□ -0.41
RIOK3-206ENST00000581339 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
RIOK3-206ENST00000581339 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
RIOK3-206ENST00000581339 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
RIOK3-206ENST00000581339 METTL3Q86U44 580 aaKnown RBP12.47□□□□□ -0.41
RIOK3-206ENST00000581339 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
RIOK3-206ENST00000581339 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
RIOK3-206ENST00000581339 SMAPO00193 183 aa12.45□□□□□ -0.42
RIOK3-206ENST00000581339 PXYLP1Q8TE99 480 aa12.45□□□□□ -0.42
RIOK3-206ENST00000581339 EYA1Q99502 592 aa12.45□□□□□ -0.42
RIOK3-206ENST00000581339 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
RIOK3-206ENST00000581339 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
RIOK3-206ENST00000581339 HRO43593 1189 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms