RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
NUP85-215ENST00000580879 ITGAEP38570 1179 aa20.34■□□□□ 0.85
NUP85-215ENST00000580879 MROH2AA6NES4 1674 aa20.34■□□□□ 0.85
NUP85-215ENST00000580879 NCOA1Q15788 1441 aa20.34■□□□□ 0.85
NUP85-215ENST00000580879 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
NUP85-215ENST00000580879 KDM5DQ9BY66 1539 aa20.32■□□□□ 0.84
NUP85-215ENST00000580879 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
NUP85-215ENST00000580879 EIF2AK4Q9P2K8 1649 aaKnown RBP20.31■□□□□ 0.84
NUP85-215ENST00000580879 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
NUP85-215ENST00000580879 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
NUP85-215ENST00000580879 PREX1Q8TCU6 1659 aa20.29■□□□□ 0.84
NUP85-215ENST00000580879 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
NUP85-215ENST00000580879 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
NUP85-215ENST00000580879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.28■□□□□ 0.84
NUP85-215ENST00000580879 NPATQ14207 1427 aa20.27■□□□□ 0.84
NUP85-215ENST00000580879 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.83
NUP85-215ENST00000580879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.26■□□□□ 0.83
NUP85-215ENST00000580879 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
NUP85-215ENST00000580879 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
NUP85-215ENST00000580879 ABCC3O15438 1527 aa20.26■□□□□ 0.83
NUP85-215ENST00000580879 FAM135AQ9P2D6 1515 aa20.26■□□□□ 0.83
NUP85-215ENST00000580879 PZPP20742 1482 aa20.23■□□□□ 0.83
NUP85-215ENST00000580879 ANKRD50Q9ULJ7 1429 aa20.22■□□□□ 0.83
NUP85-215ENST00000580879 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
NUP85-215ENST00000580879 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
NUP85-215ENST00000580879 CEP152O94986 1710 aa20.21■□□□□ 0.83
NUP85-215ENST00000580879 DEPDC5O75140 1603 aa20.2■□□□□ 0.82
NUP85-215ENST00000580879 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
NUP85-215ENST00000580879 KANK1Q14678 1352 aa20.19■□□□□ 0.82
NUP85-215ENST00000580879 TNRQ92752 1358 aa20.19■□□□□ 0.82
NUP85-215ENST00000580879 MYO3AQ8NEV4 1616 aa20.18■□□□□ 0.82
NUP85-215ENST00000580879 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
NUP85-215ENST00000580879 CEP170BQ9Y4F5 1589 aaPredicted RBP20.14■□□□□ 0.81
NUP85-215ENST00000580879 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
NUP85-215ENST00000580879 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
NUP85-215ENST00000580879 A2ML1A8K2U0 1454 aa20.11■□□□□ 0.81
NUP85-215ENST00000580879 ZNF142P52746 1687 aaPredicted RBP20.11■□□□□ 0.81
NUP85-215ENST00000580879 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
NUP85-215ENST00000580879 LMTK2Q8IWU2 1503 aa20.1■□□□□ 0.81
NUP85-215ENST00000580879 ARHGAP31Q2M1Z3 1444 aa20.1■□□□□ 0.81
NUP85-215ENST00000580879 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
NUP85-215ENST00000580879 STRCQ7RTU9 1775 aa20.08■□□□□ 0.81
NUP85-215ENST00000580879 UNC13BO14795 1591 aa20.07■□□□□ 0.8
NUP85-215ENST00000580879 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
NUP85-215ENST00000580879 NLRP1Q9C000 1473 aa20.06■□□□□ 0.8
NUP85-215ENST00000580879 EFCAB6Q5THR3 1501 aa20.06■□□□□ 0.8
NUP85-215ENST00000580879 NAIPQ13075 1403 aa20.05■□□□□ 0.8
NUP85-215ENST00000580879 NUP155O75694 1391 aa20.04■□□□□ 0.8
NUP85-215ENST00000580879 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
NUP85-215ENST00000580879 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
NUP85-215ENST00000580879 UGGT1Q9NYU2 1555 aa20.02■□□□□ 0.8
NUP85-215ENST00000580879 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
NUP85-215ENST00000580879 TET3O43151 1660 aa20■□□□□ 0.79
NUP85-215ENST00000580879 GCC2Q8IWJ2 1684 aa20■□□□□ 0.79
NUP85-215ENST00000580879 IQGAP3Q86VI3 1631 aa19.99■□□□□ 0.79
NUP85-215ENST00000580879 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
NUP85-215ENST00000580879 PKD2Q13563 968 aa19.98■□□□□ 0.79
NUP85-215ENST00000580879 PTPRTO14522 1441 aa19.98■□□□□ 0.79
NUP85-215ENST00000580879 NOS1P29475 1434 aa19.98■□□□□ 0.79
NUP85-215ENST00000580879 SYNMO15061 1565 aa19.98■□□□□ 0.79
NUP85-215ENST00000580879 IDI1Q13907 227 aa19.96■□□□□ 0.79
NUP85-215ENST00000580879 RPRD2Q5VT52 1461 aaKnown RBP19.96■□□□□ 0.79
NUP85-215ENST00000580879 ANKLE2Q86XL3 938 aa19.94■□□□□ 0.78
NUP85-215ENST00000580879 TRIM52Q96A61 297 aa19.94■□□□□ 0.78
NUP85-215ENST00000580879 STAG3Q9UJ98 1225 aa19.94■□□□□ 0.78
NUP85-215ENST00000580879 PIK3C2BO00750 1634 aa19.94■□□□□ 0.78
NUP85-215ENST00000580879 E9PCH4 1651 aa19.94■□□□□ 0.78
NUP85-215ENST00000580879 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
NUP85-215ENST00000580879 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
NUP85-215ENST00000580879 SLC52A1Q9NWF4 448 aa19.9■□□□□ 0.78
NUP85-215ENST00000580879 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.77
NUP85-215ENST00000580879 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
NUP85-215ENST00000580879 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
NUP85-215ENST00000580879 LTKP29376 864 aa19.86■□□□□ 0.77
NUP85-215ENST00000580879 TXNDC2Q86VQ3 553 aa19.86■□□□□ 0.77
NUP85-215ENST00000580879 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
NUP85-215ENST00000580879 ARHGAP23Q9P227 1491 aa19.86■□□□□ 0.77
NUP85-215ENST00000580879 TMEM2Q9UHN6 1383 aa19.85■□□□□ 0.77
NUP85-215ENST00000580879 CHGAP10645 457 aaKnown RBP19.85■□□□□ 0.77
NUP85-215ENST00000580879 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
NUP85-215ENST00000580879 SLIT1O75093 1534 aa19.85■□□□□ 0.77
NUP85-215ENST00000580879 SCAF11Q99590 1463 aaKnown RBP19.85■□□□□ 0.77
NUP85-215ENST00000580879 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
NUP85-215ENST00000580879 EID1Q9Y6B2 187 aa19.83■□□□□ 0.77
NUP85-215ENST00000580879 MED14O60244 1454 aa19.83■□□□□ 0.76
NUP85-215ENST00000580879 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
NUP85-215ENST00000580879 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
NUP85-215ENST00000580879 LTBP4Q8N2S1 1624 aa19.82■□□□□ 0.76
NUP85-215ENST00000580879 KDM5AP29375 1690 aaKnown RBP19.81■□□□□ 0.76
NUP85-215ENST00000580879 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
NUP85-215ENST00000580879 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
NUP85-215ENST00000580879 SPHKAPQ2M3C7 1700 aa19.79■□□□□ 0.76
NUP85-215ENST00000580879 FOXD1Q16676 465 aa19.79■□□□□ 0.76
NUP85-215ENST00000580879 TMEM131LA2VDJ0 1609 aa19.79■□□□□ 0.76
NUP85-215ENST00000580879 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
NUP85-215ENST00000580879 MYO5BQ9ULV0 1848 aa19.78■□□□□ 0.76
NUP85-215ENST00000580879 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
NUP85-215ENST00000580879 NUTM2DQ5VT03 806 aaPredicted RBP19.75■□□□□ 0.75
NUP85-215ENST00000580879 FBXO41Q8TF61 875 aa19.75■□□□□ 0.75
NUP85-215ENST00000580879 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms