RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
KPNB1-210ENST00000580573 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
KPNB1-210ENST00000580573 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
KPNB1-210ENST00000580573 HECW2Q9P2P5 1572 aa11.87□□□□□ -0.51
KPNB1-210ENST00000580573 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
KPNB1-210ENST00000580573 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
KPNB1-210ENST00000580573 KIF15Q9NS87 1388 aa11.85□□□□□ -0.51
KPNB1-210ENST00000580573 ERBINQ96RT1 1412 aa11.85□□□□□ -0.51
KPNB1-210ENST00000580573 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
KPNB1-210ENST00000580573 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
KPNB1-210ENST00000580573 ZEB1P37275 1124 aaPredicted RBP11.84□□□□□ -0.51
KPNB1-210ENST00000580573 DNAJC5Q9H3Z4 198 aa11.84□□□□□ -0.51
KPNB1-210ENST00000580573 RRP7BPQ9NSQ0 103 aa11.84□□□□□ -0.51
KPNB1-210ENST00000580573 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
KPNB1-210ENST00000580573 CCER1Q8TC90 406 aaPredicted RBP11.83□□□□□ -0.52
KPNB1-210ENST00000580573 PZPP20742 1482 aa11.83□□□□□ -0.52
KPNB1-210ENST00000580573 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
KPNB1-210ENST00000580573 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
KPNB1-210ENST00000580573 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
KPNB1-210ENST00000580573 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
KPNB1-210ENST00000580573 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
KPNB1-210ENST00000580573 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
KPNB1-210ENST00000580573 VWDEQ8N2E2 1590 aa11.79□□□□□ -0.52
KPNB1-210ENST00000580573 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
KPNB1-210ENST00000580573 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
KPNB1-210ENST00000580573 PRDM15P57071 1507 aaPredicted RBP11.79□□□□□ -0.52
KPNB1-210ENST00000580573 SPAG9O60271 1321 aaKnown RBP11.79□□□□□ -0.52
KPNB1-210ENST00000580573 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
KPNB1-210ENST00000580573 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
KPNB1-210ENST00000580573 FAM135AQ9P2D6 1515 aa11.76□□□□□ -0.53
KPNB1-210ENST00000580573 FKBP8Q14318 412 aa11.76□□□□□ -0.53
KPNB1-210ENST00000580573 DHX29Q7Z478 1369 aaKnown RBP11.75□□□□□ -0.53
KPNB1-210ENST00000580573 TET3O43151 1660 aa11.75□□□□□ -0.53
KPNB1-210ENST00000580573 A2MP01023 1474 aa11.74□□□□□ -0.53
KPNB1-210ENST00000580573 ARHGEF40Q8TER5 1519 aa11.73□□□□□ -0.53
KPNB1-210ENST00000580573 LMTK2Q8IWU2 1503 aa11.72□□□□□ -0.53
KPNB1-210ENST00000580573 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
KPNB1-210ENST00000580573 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.53
KPNB1-210ENST00000580573 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.53
KPNB1-210ENST00000580573 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.53
KPNB1-210ENST00000580573 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
KPNB1-210ENST00000580573 E9PCH4 1651 aa11.71□□□□□ -0.54
KPNB1-210ENST00000580573 AGLP35573 1532 aa11.7□□□□□ -0.54
KPNB1-210ENST00000580573 ATP10AO60312 1499 aa11.7□□□□□ -0.54
KPNB1-210ENST00000580573 SIGLEC1Q9BZZ2 1709 aa11.7□□□□□ -0.54
KPNB1-210ENST00000580573 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
KPNB1-210ENST00000580573 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
KPNB1-210ENST00000580573 CEP152O94986 1710 aa11.69□□□□□ -0.54
KPNB1-210ENST00000580573 NUP155O75694 1391 aa11.69□□□□□ -0.54
KPNB1-210ENST00000580573 TRHP20396 242 aaPredicted RBP11.69□□□□□ -0.54
KPNB1-210ENST00000580573 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
KPNB1-210ENST00000580573 CAPN15O75808 1086 aa11.68□□□□□ -0.54
KPNB1-210ENST00000580573 RAPGEF3O95398 923 aa11.68□□□□□ -0.54
KPNB1-210ENST00000580573 EFCAB6Q5THR3 1501 aa11.68□□□□□ -0.54
KPNB1-210ENST00000580573 SPHKAPQ2M3C7 1700 aa11.68□□□□□ -0.54
KPNB1-210ENST00000580573 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
KPNB1-210ENST00000580573 CAMSAP1Q5T5Y3 1602 aa11.65□□□□□ -0.54
KPNB1-210ENST00000580573 TRPM2O94759 1503 aa11.65□□□□□ -0.55
KPNB1-210ENST00000580573 PLA2R1Q13018 1463 aa11.64□□□□□ -0.55
KPNB1-210ENST00000580573 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
KPNB1-210ENST00000580573 ABCC3O15438 1527 aa11.64□□□□□ -0.55
KPNB1-210ENST00000580573 PTPRTO14522 1441 aa11.63□□□□□ -0.55
KPNB1-210ENST00000580573 PKD2Q13563 968 aa11.62□□□□□ -0.55
KPNB1-210ENST00000580573 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
KPNB1-210ENST00000580573 KANK1Q14678 1352 aa11.6□□□□□ -0.55
KPNB1-210ENST00000580573 ARHGAP31Q2M1Z3 1444 aa11.6□□□□□ -0.55
KPNB1-210ENST00000580573 KIF3BO15066 747 aa11.59□□□□□ -0.55
KPNB1-210ENST00000580573 PIK3C2BO00750 1634 aa11.59□□□□□ -0.55
KPNB1-210ENST00000580573 CLTCL1P53675 1640 aa11.59□□□□□ -0.55
KPNB1-210ENST00000580573 POLA2Q14181 598 aa11.58□□□□□ -0.56
KPNB1-210ENST00000580573 MROH2AA6NES4 1674 aa11.57□□□□□ -0.56
KPNB1-210ENST00000580573 PREX1Q8TCU6 1659 aa11.57□□□□□ -0.56
KPNB1-210ENST00000580573 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
KPNB1-210ENST00000580573 TONSLQ96HA7 1378 aa11.56□□□□□ -0.56
KPNB1-210ENST00000580573 KIF1BO60333 1816 aa11.56□□□□□ -0.56
KPNB1-210ENST00000580573 NPATQ14207 1427 aa11.56□□□□□ -0.56
KPNB1-210ENST00000580573 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
KPNB1-210ENST00000580573 CCDC144AA2RUR9 1427 aa11.55□□□□□ -0.56
KPNB1-210ENST00000580573 NOS1P29475 1434 aa11.55□□□□□ -0.56
KPNB1-210ENST00000580573 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
KPNB1-210ENST00000580573 SYNMO15061 1565 aa11.54□□□□□ -0.56
KPNB1-210ENST00000580573 SPATA31E1Q6ZUB1 1445 aa11.54□□□□□ -0.56
KPNB1-210ENST00000580573 PPP1R15AO75807 674 aaPredicted RBP11.54□□□□□ -0.56
KPNB1-210ENST00000580573 UHRF1BP1Q6BDS2 1440 aa11.53□□□□□ -0.56
KPNB1-210ENST00000580573 CNTLNQ9NXG0 1405 aa11.53□□□□□ -0.56
KPNB1-210ENST00000580573 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
KPNB1-210ENST00000580573 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
KPNB1-210ENST00000580573 SPATA31D1Q6ZQQ2 1576 aa11.52□□□□□ -0.57
KPNB1-210ENST00000580573 CFAP65Q6ZU64 1925 aaKnown RBP11.52□□□□□ -0.57
KPNB1-210ENST00000580573 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
KPNB1-210ENST00000580573 UGGT1Q9NYU2 1555 aa11.5□□□□□ -0.57
KPNB1-210ENST00000580573 LAMC1P11047 1609 aa11.49□□□□□ -0.57
KPNB1-210ENST00000580573 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
KPNB1-210ENST00000580573 PPLO60437 1756 aa11.49□□□□□ -0.57
KPNB1-210ENST00000580573 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms