RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 TEX14Q8IWB6 1497 aa21.37■■□□□ 1.01
CDK5RAP3-218ENST00000580391 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
CDK5RAP3-218ENST00000580391 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
CDK5RAP3-218ENST00000580391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■□□□ 13.4
CDK5RAP3-218ENST00000580391 ABCA6Q8N139 1617 aa21.33■■□□□ 1.01
CDK5RAP3-218ENST00000580391 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
CDK5RAP3-218ENST00000580391 FAM69CQ0P6D2 419 aa21.32■■□□□ 1
CDK5RAP3-218ENST00000580391 MLH3Q9UHC1 1453 aa21.31■■□□□ 1
CDK5RAP3-218ENST00000580391 MROH1Q8NDA8 1641 aa21.3■■□□□ 1
CDK5RAP3-218ENST00000580391 DIEXFQ68CQ4 756 aaKnown RBP21.3■■□□□ 1
CDK5RAP3-218ENST00000580391 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
CDK5RAP3-218ENST00000580391 DHX29Q7Z478 1369 aaKnown RBP21.29■■□□□ 1
CDK5RAP3-218ENST00000580391 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
CDK5RAP3-218ENST00000580391 PRDM15P57071 1507 aaPredicted RBP21.28■■□□□ 1
CDK5RAP3-218ENST00000580391 E9PCH4 1651 aa21.28■■□□□ 1
CDK5RAP3-218ENST00000580391 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
CDK5RAP3-218ENST00000580391 A2MP01023 1474 aa21.27■■□□□ 1
CDK5RAP3-218ENST00000580391 TET3O43151 1660 aa21.26■□□□□ 0.99
CDK5RAP3-218ENST00000580391 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
CDK5RAP3-218ENST00000580391 RAPGEF3O95398 923 aa21.25■□□□□ 0.99
CDK5RAP3-218ENST00000580391 RNF17Q9BXT8 1623 aaKnown RBP21.25■□□□□ 0.99
CDK5RAP3-218ENST00000580391 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
CDK5RAP3-218ENST00000580391 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
CDK5RAP3-218ENST00000580391 CEP152O94986 1710 aa21.22■□□□□ 0.99
CDK5RAP3-218ENST00000580391 KIF3BO15066 747 aa21.21■□□□□ 0.99
CDK5RAP3-218ENST00000580391 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
CDK5RAP3-218ENST00000580391 ZMYM4Q5VZL5 1548 aa21.2■□□□□ 0.98
CDK5RAP3-218ENST00000580391 CCDC144AA2RUR9 1427 aa21.18■□□□□ 0.98
CDK5RAP3-218ENST00000580391 ATP10AO60312 1499 aa21.18■□□□□ 0.98
CDK5RAP3-218ENST00000580391 KANK1Q14678 1352 aa21.17■□□□□ 0.98
CDK5RAP3-218ENST00000580391 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
CDK5RAP3-218ENST00000580391 NBPF8Q3BBV2 869 aa21.15■□□□□ 0.98
CDK5RAP3-218ENST00000580391 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
CDK5RAP3-218ENST00000580391 TRPM2O94759 1503 aa21.14■□□□□ 0.97
CDK5RAP3-218ENST00000580391 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
CDK5RAP3-218ENST00000580391 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
CDK5RAP3-218ENST00000580391 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
CDK5RAP3-218ENST00000580391 PTPRTO14522 1441 aa21.08■□□□□ 0.97
CDK5RAP3-218ENST00000580391 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
CDK5RAP3-218ENST00000580391 CAMSAP1Q5T5Y3 1602 aa21.06■□□□□ 0.96
CDK5RAP3-218ENST00000580391 ABCC3O15438 1527 aa21.06■□□□□ 0.96
CDK5RAP3-218ENST00000580391 CFAP65Q6ZU64 1925 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-218ENST00000580391 COL17A1Q9UMD9 1497 aaPredicted RBP21.05■□□□□ 0.96
CDK5RAP3-218ENST00000580391 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-218ENST00000580391 GGT6Q6P531 493 aa21.04■□□□□ 0.96
CDK5RAP3-218ENST00000580391 RALGAPBQ86X10 1494 aa21.04■□□□□ 0.96
CDK5RAP3-218ENST00000580391 ZC3H13Q5T200 1668 aaKnown RBP21.04■□□□□ 0.96
CDK5RAP3-218ENST00000580391 SIGLEC1Q9BZZ2 1709 aa21.03■□□□□ 0.96
CDK5RAP3-218ENST00000580391 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.96
CDK5RAP3-218ENST00000580391 REREQ9P2R6 1566 aa21.02■□□□□ 0.96
CDK5RAP3-218ENST00000580391 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
CDK5RAP3-218ENST00000580391 TRPM1Q7Z4N2 1603 aa21.02■□□□□ 0.95
CDK5RAP3-218ENST00000580391 SPATA31E1Q6ZUB1 1445 aa21.01■□□□□ 0.95
CDK5RAP3-218ENST00000580391 DCAF11Q8TEB1 546 aa21.01■□□□□ 0.95
CDK5RAP3-218ENST00000580391 ARHGEF40Q8TER5 1519 aa21.01■□□□□ 0.95
CDK5RAP3-218ENST00000580391 KIF1BO60333 1816 aa21■□□□□ 0.95
CDK5RAP3-218ENST00000580391 RGL3Q3MIN7 710 aa21■□□□□ 0.95
CDK5RAP3-218ENST00000580391 KDM2AQ9Y2K7 1162 aa21■□□□□ 0.95
CDK5RAP3-218ENST00000580391 NPATQ14207 1427 aa21■□□□□ 0.95
CDK5RAP3-218ENST00000580391 EIF4G2P78344 907 aaKnown RBP eCLIP20.99■□□□□ 0.95
CDK5RAP3-218ENST00000580391 MROH2AA6NES4 1674 aa20.98■□□□□ 0.95
CDK5RAP3-218ENST00000580391 PRAG1Q86YV5 1406 aa20.98■□□□□ 0.95
CDK5RAP3-218ENST00000580391 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
CDK5RAP3-218ENST00000580391 MIER1Q8N108 512 aa20.97■□□□□ 0.95
CDK5RAP3-218ENST00000580391 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
CDK5RAP3-218ENST00000580391 NEURL4Q96JN8 1562 aa20.95■□□□□ 0.94
CDK5RAP3-218ENST00000580391 AGLP35573 1532 aa20.94■□□□□ 0.94
CDK5RAP3-218ENST00000580391 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
CDK5RAP3-218ENST00000580391 IFT172Q9UG01 1749 aa20.93■□□□□ 0.94
CDK5RAP3-218ENST00000580391 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
CDK5RAP3-218ENST00000580391 USP47Q96K76 1375 aa20.92■□□□□ 0.94
CDK5RAP3-218ENST00000580391 SYNMO15061 1565 aa20.9■□□□□ 0.94
CDK5RAP3-218ENST00000580391 CNTLNQ9NXG0 1405 aa20.9■□□□□ 0.94
CDK5RAP3-218ENST00000580391 ADGRB3O60242 1522 aa20.89■□□□□ 0.94
CDK5RAP3-218ENST00000580391 LAMC1P11047 1609 aa20.89■□□□□ 0.93
CDK5RAP3-218ENST00000580391 PREX1Q8TCU6 1659 aa20.88■□□□□ 0.93
CDK5RAP3-218ENST00000580391 PIK3C2BO00750 1634 aa20.88■□□□□ 0.93
CDK5RAP3-218ENST00000580391 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
CDK5RAP3-218ENST00000580391 ARHGAP31Q2M1Z3 1444 aa20.88■□□□□ 0.93
CDK5RAP3-218ENST00000580391 ROCK2O75116 1388 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-218ENST00000580391 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
CDK5RAP3-218ENST00000580391 NOS1P29475 1434 aa20.87■□□□□ 0.93
CDK5RAP3-218ENST00000580391 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
CDK5RAP3-218ENST00000580391 PPLO60437 1756 aa20.83■□□□□ 0.93
CDK5RAP3-218ENST00000580391 GPRASP1Q5JY77 1395 aa20.83■□□□□ 0.93
CDK5RAP3-218ENST00000580391 C11orf95C9JLR9 678 aaPredicted RBP20.83■□□□□ 0.92
CDK5RAP3-218ENST00000580391 CCDC7Q96M83 1385 aa20.82■□□□□ 0.92
CDK5RAP3-218ENST00000580391 MYOM2P54296 1465 aa20.81■□□□□ 0.92
CDK5RAP3-218ENST00000580391 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
CDK5RAP3-218ENST00000580391 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
CDK5RAP3-218ENST00000580391 KIAA1210Q9ULL0 1709 aa20.8■□□□□ 0.92
CDK5RAP3-218ENST00000580391 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
CDK5RAP3-218ENST00000580391 IQGAP1P46940 1657 aa20.79■□□□□ 0.92
CDK5RAP3-218ENST00000580391 KIF7Q2M1P5 1343 aa20.77■□□□□ 0.92
CDK5RAP3-218ENST00000580391 MLECQ14165 292 aa20.76■□□□□ 0.91
CDK5RAP3-218ENST00000580391 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
CDK5RAP3-218ENST00000580391 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
CDK5RAP3-218ENST00000580391 NRXN1Q9ULB1 1477 aa20.74■□□□□ 0.91
CDK5RAP3-218ENST00000580391 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
CDK5RAP3-218ENST00000580391 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms