RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
ERBB2-208ENST00000578630 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
ERBB2-208ENST00000578630 ZMYM3Q14202 1370 aa17.35■□□□□ 0.37
ERBB2-208ENST00000578630 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
ERBB2-208ENST00000578630 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
ERBB2-208ENST00000578630 KANK1Q14678 1352 aa17.33■□□□□ 0.36
ERBB2-208ENST00000578630 RIMS1Q86UR5 1692 aaKnown RBP17.3■□□□□ 0.36
ERBB2-208ENST00000578630 FER1L4A9Z1Z3 1794 aa17.3■□□□□ 0.36
ERBB2-208ENST00000578630 EIF2AK4Q9P2K8 1649 aaKnown RBP17.29■□□□□ 0.36
ERBB2-208ENST00000578630 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
ERBB2-208ENST00000578630 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
ERBB2-208ENST00000578630 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
ERBB2-208ENST00000578630 NAIPQ13075 1403 aa17.23■□□□□ 0.35
ERBB2-208ENST00000578630 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
ERBB2-208ENST00000578630 RNF17Q9BXT8 1623 aaKnown RBP17.23■□□□□ 0.35
ERBB2-208ENST00000578630 NUP155O75694 1391 aa17.23■□□□□ 0.35
ERBB2-208ENST00000578630 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
ERBB2-208ENST00000578630 FBXO31Q5XUX0 539 aaPredicted RBP17.22■□□□□ 0.35
ERBB2-208ENST00000578630 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
ERBB2-208ENST00000578630 CLTCQ00610 1675 aaKnown RBP17.22■□□□□ 0.35
ERBB2-208ENST00000578630 NPATQ14207 1427 aa17.21■□□□□ 0.35
ERBB2-208ENST00000578630 ABCC3O15438 1527 aa17.2■□□□□ 0.34
ERBB2-208ENST00000578630 MROH2AA6NES4 1674 aa17.2■□□□□ 0.34
ERBB2-208ENST00000578630 PRDM15P57071 1507 aaPredicted RBP17.18■□□□□ 0.34
ERBB2-208ENST00000578630 C3P01024 1663 aa17.18■□□□□ 0.34
ERBB2-208ENST00000578630 PZPP20742 1482 aa17.18■□□□□ 0.34
ERBB2-208ENST00000578630 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
ERBB2-208ENST00000578630 MROH1Q8NDA8 1641 aa17.17■□□□□ 0.34
ERBB2-208ENST00000578630 UHRF1BP1Q6BDS2 1440 aa17.16■□□□□ 0.34
ERBB2-208ENST00000578630 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
ERBB2-208ENST00000578630 TNRQ92752 1358 aa17.15■□□□□ 0.34
ERBB2-208ENST00000578630 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
ERBB2-208ENST00000578630 ZC3H13Q5T200 1668 aaKnown RBP17.15■□□□□ 0.34
ERBB2-208ENST00000578630 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
ERBB2-208ENST00000578630 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
ERBB2-208ENST00000578630 HRCP23327 699 aa17.13■□□□□ 0.33
ERBB2-208ENST00000578630 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
ERBB2-208ENST00000578630 HSPA2P54652 639 aa17.12■□□□□ 0.33
ERBB2-208ENST00000578630 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
ERBB2-208ENST00000578630 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
ERBB2-208ENST00000578630 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-208ENST00000578630 UNC13BO14795 1591 aa17.1■□□□□ 0.33
ERBB2-208ENST00000578630 CEP152O94986 1710 aa17.1■□□□□ 0.33
ERBB2-208ENST00000578630 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
ERBB2-208ENST00000578630 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
ERBB2-208ENST00000578630 GCC2Q8IWJ2 1684 aa17.09■□□□□ 0.33
ERBB2-208ENST00000578630 CAMSAP1Q5T5Y3 1602 aa17.08■□□□□ 0.32
ERBB2-208ENST00000578630 ERVK-7P63135 1459 aa17.08■□□□□ 0.32
ERBB2-208ENST00000578630 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.32
ERBB2-208ENST00000578630 PKD2Q13563 968 aa17.08■□□□□ 0.32
ERBB2-208ENST00000578630 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.32
ERBB2-208ENST00000578630 RAB3GAP2Q9H2M9 1393 aa17.07■□□□□ 0.32
ERBB2-208ENST00000578630 IDI1Q13907 227 aa17.07■□□□□ 0.32
ERBB2-208ENST00000578630 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
ERBB2-208ENST00000578630 NLRP1Q9C000 1473 aa17.06■□□□□ 0.32
ERBB2-208ENST00000578630 PREX1Q8TCU6 1659 aa17.06■□□□□ 0.32
ERBB2-208ENST00000578630 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
ERBB2-208ENST00000578630 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
ERBB2-208ENST00000578630 SPATA31D1Q6ZQQ2 1576 aa17.05■□□□□ 0.32
ERBB2-208ENST00000578630 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
ERBB2-208ENST00000578630 TET3O43151 1660 aa17.04■□□□□ 0.32
ERBB2-208ENST00000578630 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
ERBB2-208ENST00000578630 NOS1P29475 1434 aa17.04■□□□□ 0.32
ERBB2-208ENST00000578630 ANKLE2Q86XL3 938 aa17.02■□□□□ 0.32
ERBB2-208ENST00000578630 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
ERBB2-208ENST00000578630 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
ERBB2-208ENST00000578630 CEP170BQ9Y4F5 1589 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-208ENST00000578630 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
ERBB2-208ENST00000578630 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
ERBB2-208ENST00000578630 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
ERBB2-208ENST00000578630 NCKAP5LQ9HCH0 1330 aa16.97■□□□□ 0.31
ERBB2-208ENST00000578630 FOXD1Q16676 465 aa16.97■□□□□ 0.31
ERBB2-208ENST00000578630 PTPRTO14522 1441 aa16.96■□□□□ 0.31
ERBB2-208ENST00000578630 TXNDC2Q86VQ3 553 aa16.96■□□□□ 0.31
ERBB2-208ENST00000578630 E9PCH4 1651 aa16.96■□□□□ 0.31
ERBB2-208ENST00000578630 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
ERBB2-208ENST00000578630 ZNF142P52746 1687 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-208ENST00000578630 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
ERBB2-208ENST00000578630 SYNMO15061 1565 aa16.92■□□□□ 0.3
ERBB2-208ENST00000578630 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
ERBB2-208ENST00000578630 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
ERBB2-208ENST00000578630 LTKP29376 864 aa16.89■□□□□ 0.29
ERBB2-208ENST00000578630 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
ERBB2-208ENST00000578630 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-208ENST00000578630 BCANQ96GW7 911 aa16.88■□□□□ 0.29
ERBB2-208ENST00000578630 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
ERBB2-208ENST00000578630 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
ERBB2-208ENST00000578630 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
ERBB2-208ENST00000578630 TRPM2O94759 1503 aa16.86■□□□□ 0.29
ERBB2-208ENST00000578630 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
ERBB2-208ENST00000578630 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
ERBB2-208ENST00000578630 ADGRB3O60242 1522 aa16.85■□□□□ 0.29
ERBB2-208ENST00000578630 SLIT1O75093 1534 aa16.85■□□□□ 0.29
ERBB2-208ENST00000578630 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
ERBB2-208ENST00000578630 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
ERBB2-208ENST00000578630 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
ERBB2-208ENST00000578630 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
ERBB2-208ENST00000578630 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-208ENST00000578630 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-208ENST00000578630 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms