RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 NPM3O75607 178 aaKnown RBP12.34□□□□□ -0.43
NCOA4-201ENST00000578454 ERBINQ96RT1 1412 aa12.34□□□□□ -0.43
NCOA4-201ENST00000578454 KDM5CP41229 1560 aa12.33□□□□□ -0.44
NCOA4-201ENST00000578454 PPRC1Q5VV67 1664 aaKnown RBP12.32□□□□□ -0.44
NCOA4-201ENST00000578454 MLH3Q9UHC1 1453 aa12.32□□□□□ -0.44
NCOA4-201ENST00000578454 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
NCOA4-201ENST00000578454 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
NCOA4-201ENST00000578454 NUP155O75694 1391 aa12.32□□□□□ -0.44
NCOA4-201ENST00000578454 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
NCOA4-201ENST00000578454 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
NCOA4-201ENST00000578454 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
NCOA4-201ENST00000578454 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
NCOA4-201ENST00000578454 KDM5DQ9BY66 1539 aa12.29□□□□□ -0.44
NCOA4-201ENST00000578454 PZPP20742 1482 aa12.29□□□□□ -0.44
NCOA4-201ENST00000578454 RICTORQ6R327 1708 aa12.29□□□□□ -0.44
NCOA4-201ENST00000578454 UNC13BO14795 1591 aa12.28□□□□□ -0.44
NCOA4-201ENST00000578454 NEUROD1Q13562 356 aa12.28□□□□□ -0.44
NCOA4-201ENST00000578454 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.44
NCOA4-201ENST00000578454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.442e-7■□□□□ 11.2
NCOA4-201ENST00000578454 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
NCOA4-201ENST00000578454 A2MP01023 1474 aa12.26□□□□□ -0.45
NCOA4-201ENST00000578454 PKD2Q13563 968 aa12.26□□□□□ -0.45
NCOA4-201ENST00000578454 FKBP8Q14318 412 aa12.26□□□□□ -0.45
NCOA4-201ENST00000578454 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
NCOA4-201ENST00000578454 FRMPD1Q5SYB0 1578 aa12.25□□□□□ -0.45
NCOA4-201ENST00000578454 ZMYM4Q5VZL5 1548 aa12.25□□□□□ -0.45
NCOA4-201ENST00000578454 FAM135AQ9P2D6 1515 aa12.25□□□□□ -0.45
NCOA4-201ENST00000578454 KIF3BO15066 747 aa12.25□□□□□ -0.45
NCOA4-201ENST00000578454 FOXD1Q16676 465 aa12.25□□□□□ -0.45
NCOA4-201ENST00000578454 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
NCOA4-201ENST00000578454 KANK1Q14678 1352 aa12.23□□□□□ -0.45
NCOA4-201ENST00000578454 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
NCOA4-201ENST00000578454 IQGAP3Q86VI3 1631 aa12.23□□□□□ -0.45
NCOA4-201ENST00000578454 ABCA6Q8N139 1617 aa12.23□□□□□ -0.45
NCOA4-201ENST00000578454 DIP2CQ9Y2E4 1556 aa12.22□□□□□ -0.45
NCOA4-201ENST00000578454 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
NCOA4-201ENST00000578454 MYT1Q01538 1121 aa12.21□□□□□ -0.45
NCOA4-201ENST00000578454 TONSLQ96HA7 1378 aa12.21□□□□□ -0.45
NCOA4-201ENST00000578454 YEATS2Q9ULM3 1422 aa12.2□□□□□ -0.46
NCOA4-201ENST00000578454 ATP10AO60312 1499 aa12.19□□□□□ -0.46
NCOA4-201ENST00000578454 COL17A1Q9UMD9 1497 aaPredicted RBP12.19□□□□□ -0.46
NCOA4-201ENST00000578454 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
NCOA4-201ENST00000578454 BCORL1Q5H9F3 1711 aa12.19□□□□□ -0.46
NCOA4-201ENST00000578454 PRDM15P57071 1507 aaPredicted RBP12.18□□□□□ -0.46
NCOA4-201ENST00000578454 RNF17Q9BXT8 1623 aaKnown RBP12.18□□□□□ -0.46
NCOA4-201ENST00000578454 VWDEQ8N2E2 1590 aa12.17□□□□□ -0.46
NCOA4-201ENST00000578454 GGT6Q6P531 493 aa12.17□□□□□ -0.46
NCOA4-201ENST00000578454 RPRD2Q5VT52 1461 aaKnown RBP12.17□□□□□ -0.46
NCOA4-201ENST00000578454 MROH1Q8NDA8 1641 aa12.16□□□□□ -0.46
NCOA4-201ENST00000578454 TET3O43151 1660 aa12.15□□□□□ -0.46
NCOA4-201ENST00000578454 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
NCOA4-201ENST00000578454 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
NCOA4-201ENST00000578454 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
NCOA4-201ENST00000578454 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
NCOA4-201ENST00000578454 LMTK2Q8IWU2 1503 aa12.13□□□□□ -0.47
NCOA4-201ENST00000578454 ARHGEF40Q8TER5 1519 aa12.13□□□□□ -0.47
NCOA4-201ENST00000578454 CCDC144AA2RUR9 1427 aa12.12□□□□□ -0.47
NCOA4-201ENST00000578454 AGLP35573 1532 aa12.12□□□□□ -0.47
NCOA4-201ENST00000578454 E9PCH4 1651 aa12.12□□□□□ -0.47
NCOA4-201ENST00000578454 L3MBTL2Q969R5 705 aa12.11□□□□□ -0.47
NCOA4-201ENST00000578454 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
NCOA4-201ENST00000578454 EFCAB6Q5THR3 1501 aa12.1□□□□□ -0.47
NCOA4-201ENST00000578454 CEP152O94986 1710 aa12.1□□□□□ -0.47
NCOA4-201ENST00000578454 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
NCOA4-201ENST00000578454 ABCC3O15438 1527 aa12.09□□□□□ -0.47
NCOA4-201ENST00000578454 PTPRTO14522 1441 aa12.09□□□□□ -0.47
NCOA4-201ENST00000578454 ZC3H13Q5T200 1668 aaKnown RBP12.09□□□□□ -0.47
NCOA4-201ENST00000578454 SPHKAPQ2M3C7 1700 aa12.08□□□□□ -0.48
NCOA4-201ENST00000578454 TRPM2O94759 1503 aa12.07□□□□□ -0.48
NCOA4-201ENST00000578454 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
NCOA4-201ENST00000578454 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
NCOA4-201ENST00000578454 CAMSAP1Q5T5Y3 1602 aa12.06□□□□□ -0.48
NCOA4-201ENST00000578454 ARID4BQ4LE39 1312 aaPredicted RBP12.06□□□□□ -0.48
NCOA4-201ENST00000578454 NPATQ14207 1427 aa12.05□□□□□ -0.48
NCOA4-201ENST00000578454 ARHGAP31Q2M1Z3 1444 aa12.05□□□□□ -0.48
NCOA4-201ENST00000578454 MLECQ14165 292 aa12.04□□□□□ -0.48
NCOA4-201ENST00000578454 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
NCOA4-201ENST00000578454 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
NCOA4-201ENST00000578454 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
NCOA4-201ENST00000578454 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
NCOA4-201ENST00000578454 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
NCOA4-201ENST00000578454 CLTCL1P53675 1640 aa12.02□□□□□ -0.49
NCOA4-201ENST00000578454 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
NCOA4-201ENST00000578454 SPATA31E1Q6ZUB1 1445 aa12□□□□□ -0.49
NCOA4-201ENST00000578454 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
NCOA4-201ENST00000578454 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
NCOA4-201ENST00000578454 CFAP65Q6ZU64 1925 aaKnown RBP12□□□□□ -0.49
NCOA4-201ENST00000578454 NOS1P29475 1434 aa12□□□□□ -0.49
NCOA4-201ENST00000578454 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
NCOA4-201ENST00000578454 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
NCOA4-201ENST00000578454 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
NCOA4-201ENST00000578454 NEURL4Q96JN8 1562 aa11.99□□□□□ -0.49
NCOA4-201ENST00000578454 KIF1BO60333 1816 aa11.98□□□□□ -0.49
NCOA4-201ENST00000578454 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
NCOA4-201ENST00000578454 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
NCOA4-201ENST00000578454 PREX1Q8TCU6 1659 aa11.97□□□□□ -0.49
NCOA4-201ENST00000578454 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
NCOA4-201ENST00000578454 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
NCOA4-201ENST00000578454 SYNMO15061 1565 aa11.96□□□□□ -0.5
NCOA4-201ENST00000578454 ZMYM3Q14202 1370 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms