RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.04
ERBB2-206ENST00000578373 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.03
ERBB2-206ENST00000578373 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.03
ERBB2-206ENST00000578373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.26■□□□□ 0.03
ERBB2-206ENST00000578373 SKAP1Q86WV1 359 aa15.25■□□□□ 0.03
ERBB2-206ENST00000578373 CFTRP13569 1480 aa15.25■□□□□ 0.03
ERBB2-206ENST00000578373 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-206ENST00000578373 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
ERBB2-206ENST00000578373 FAM161AQ3B820 660 aa15.25■□□□□ 0.03
ERBB2-206ENST00000578373 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
ERBB2-206ENST00000578373 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
ERBB2-206ENST00000578373 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
ERBB2-206ENST00000578373 NOL8Q76FK4 1167 aaKnown RBP15.23■□□□□ 0.03
ERBB2-206ENST00000578373 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
ERBB2-206ENST00000578373 MSH5O43196 834 aa15.22■□□□□ 0.03
ERBB2-206ENST00000578373 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.038e-7■■■■□ 26
ERBB2-206ENST00000578373 KCNJ4P48050 445 aa15.21■□□□□ 0.03
ERBB2-206ENST00000578373 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-206ENST00000578373 PMFBP1Q8TBY8 1022 aa15.21■□□□□ 0.03
ERBB2-206ENST00000578373 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
ERBB2-206ENST00000578373 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
ERBB2-206ENST00000578373 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
ERBB2-206ENST00000578373 PANK1Q8TE04 598 aa15.21■□□□□ 0.02
ERBB2-206ENST00000578373 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-206ENST00000578373 NESP48681 1621 aa15.2■□□□□ 0.02
ERBB2-206ENST00000578373 GSE1Q14687 1217 aa15.2■□□□□ 0.02
ERBB2-206ENST00000578373 SLC4A10Q6U841 1118 aa15.19■□□□□ 0.02
ERBB2-206ENST00000578373 NAP1L2Q9ULW6 460 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-206ENST00000578373 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
ERBB2-206ENST00000578373 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
ERBB2-206ENST00000578373 CC2D2AQ9P2K1 1620 aa15.18■□□□□ 0.02
ERBB2-206ENST00000578373 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
ERBB2-206ENST00000578373 CASKIN1Q8WXD9 1431 aa15.17■□□□□ 0.02
ERBB2-206ENST00000578373 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
ERBB2-206ENST00000578373 CHMP4BQ9H444 224 aaKnown RBP15.17■□□□□ 0.02
ERBB2-206ENST00000578373 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
ERBB2-206ENST00000578373 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
ERBB2-206ENST00000578373 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
ERBB2-206ENST00000578373 FGD1P98174 961 aa15.16■□□□□ 0.02
ERBB2-206ENST00000578373 E9PSI1 815 aa15.15■□□□□ 0.02
ERBB2-206ENST00000578373 RSPH4AQ5TD94 716 aa15.15■□□□□ 0.02
ERBB2-206ENST00000578373 TMEM132EQ6IEE7 984 aa15.15■□□□□ 0.02
ERBB2-206ENST00000578373 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
ERBB2-206ENST00000578373 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
ERBB2-206ENST00000578373 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
ERBB2-206ENST00000578373 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
ERBB2-206ENST00000578373 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
ERBB2-206ENST00000578373 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
ERBB2-206ENST00000578373 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
ERBB2-206ENST00000578373 PTPRGP23470 1445 aa15.13■□□□□ 0.01
ERBB2-206ENST00000578373 GBP4Q96PP9 640 aa15.13■□□□□ 0.01
ERBB2-206ENST00000578373 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
ERBB2-206ENST00000578373 CUX1P39880 1505 aa15.12■□□□□ 0.01
ERBB2-206ENST00000578373 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
ERBB2-206ENST00000578373 BCAR3O75815 825 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 AFAP1Q8N556 730 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 LTV1Q96GA3 475 aaPredicted RBP15.11■□□□□ 0.01
ERBB2-206ENST00000578373 TERF2IPQ9NYB0 399 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 ZKSCAN2Q63HK3 967 aa15.11■□□□□ 0.01
ERBB2-206ENST00000578373 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-206ENST00000578373 TRIM6-TRIM34B2RNG4 842 aa15.1■□□□□ 0.01
ERBB2-206ENST00000578373 BRPF3Q9ULD4 1205 aa15.1■□□□□ 0.01
ERBB2-206ENST00000578373 CGNL1Q0VF96 1302 aa15.1■□□□□ 0.01
ERBB2-206ENST00000578373 LNPKQ9C0E8 428 aa15.09■□□□□ 0.01
ERBB2-206ENST00000578373 ZRSR1Q15695 479 aaKnown RBP15.09■□□□□ 0.01
ERBB2-206ENST00000578373 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0.01
ERBB2-206ENST00000578373 GGNBP2Q9H3C7 697 aa15.08■□□□□ 0.01
ERBB2-206ENST00000578373 HFM1A2PYH4 1435 aa15.08■□□□□ 0
ERBB2-206ENST00000578373 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
ERBB2-206ENST00000578373 NAIPQ13075 1403 aa15.07■□□□□ 0
ERBB2-206ENST00000578373 PPP2R1AP30153 589 aa15.06■□□□□ 0
ERBB2-206ENST00000578373 TIAM1Q13009 1591 aa15.06■□□□□ 0
ERBB2-206ENST00000578373 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ 0
ERBB2-206ENST00000578373 MTHFSP49914 203 aa15.05■□□□□ 0
ERBB2-206ENST00000578373 RIPK4P57078 832 aa15.05■□□□□ 0
ERBB2-206ENST00000578373 HMOX1P09601 288 aa15.05■□□□□ -0
ERBB2-206ENST00000578373 FYCO1Q9BQS8 1478 aa15.05■□□□□ -0
ERBB2-206ENST00000578373 MCCP23508 829 aa15.05■□□□□ -0
ERBB2-206ENST00000578373 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ -0
ERBB2-206ENST00000578373 NECTIN2Q92692 538 aa15.05■□□□□ -0
ERBB2-206ENST00000578373 PRG4Q92954 1404 aaPredicted RBP15.05■□□□□ -0
ERBB2-206ENST00000578373 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
ERBB2-206ENST00000578373 BACH2Q9BYV9 841 aa15.04■□□□□ -0
ERBB2-206ENST00000578373 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
ERBB2-206ENST00000578373 C20orf194Q5TEA3 1177 aa15.04■□□□□ -0
ERBB2-206ENST00000578373 TOP2BQ02880 1626 aa15.04■□□□□ -0
ERBB2-206ENST00000578373 CABP2Q9NPB3 220 aa15.03■□□□□ -0
ERBB2-206ENST00000578373 SLC12A5Q9H2X9 1139 aa15.03■□□□□ -0
ERBB2-206ENST00000578373 DDX49Q9Y6V7 483 aaKnown RBP15.03■□□□□ -0
ERBB2-206ENST00000578373 KIAA1211Q6ZU35 1233 aa15.02■□□□□ -0
ERBB2-206ENST00000578373 STK31Q9BXU1 1019 aa15.02□□□□□ -0.01
ERBB2-206ENST00000578373 ZNF330Q9Y3S2 320 aaPredicted RBP15.01□□□□□ -0.01
ERBB2-206ENST00000578373 DRC7Q8IY82 874 aa15.01□□□□□ -0.01
ERBB2-206ENST00000578373 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
ERBB2-206ENST00000578373 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
ERBB2-206ENST00000578373 RILPL2Q969X0 211 aa15□□□□□ -0.01
ERBB2-206ENST00000578373 ANO8Q9HCE9 1232 aaPredicted RBP15□□□□□ -0.01
ERBB2-206ENST00000578373 RUNDC1Q96C34 613 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms