RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ABCA6Q8N139 1617 aa27■■□□□ 1.91
PRKCA-203ENST00000578063 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
PRKCA-203ENST00000578063 DEPDC5O75140 1603 aa26.98■■□□□ 1.91
PRKCA-203ENST00000578063 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
PRKCA-203ENST00000578063 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
PRKCA-203ENST00000578063 ANKRD30BQ9BXX2 1392 aa26.96■■□□□ 1.91
PRKCA-203ENST00000578063 DIP2CQ9Y2E4 1556 aa26.96■■□□□ 1.91
PRKCA-203ENST00000578063 PKD2Q13563 968 aa26.95■■□□□ 1.9
PRKCA-203ENST00000578063 NEUROD1Q13562 356 aa26.94■■□□□ 1.9
PRKCA-203ENST00000578063 FOXD1Q16676 465 aa26.93■■□□□ 1.9
PRKCA-203ENST00000578063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.93■■□□□ 1.94e-7■■■□□ 15
PRKCA-203ENST00000578063 PRDM15P57071 1507 aaPredicted RBP26.91■■□□□ 1.9
PRKCA-203ENST00000578063 KIF3BO15066 747 aa26.9■■□□□ 1.9
PRKCA-203ENST00000578063 BCORL1Q5H9F3 1711 aa26.9■■□□□ 1.9
PRKCA-203ENST00000578063 RNF17Q9BXT8 1623 aaKnown RBP26.89■■□□□ 1.9
PRKCA-203ENST00000578063 YEATS2Q9ULM3 1422 aa26.89■■□□□ 1.9
PRKCA-203ENST00000578063 KANK1Q14678 1352 aa26.89■■□□□ 1.89
PRKCA-203ENST00000578063 VWDEQ8N2E2 1590 aa26.88■■□□□ 1.89
PRKCA-203ENST00000578063 TONSLQ96HA7 1378 aa26.87■■□□□ 1.89
PRKCA-203ENST00000578063 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
PRKCA-203ENST00000578063 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
PRKCA-203ENST00000578063 RPRD2Q5VT52 1461 aaKnown RBP26.85■■□□□ 1.89
PRKCA-203ENST00000578063 REREQ9P2R6 1566 aa26.82■■□□□ 1.88
PRKCA-203ENST00000578063 ATP10AO60312 1499 aa26.82■■□□□ 1.88
PRKCA-203ENST00000578063 TET3O43151 1660 aa26.8■■□□□ 1.88
PRKCA-203ENST00000578063 ARHGEF40Q8TER5 1519 aa26.79■■□□□ 1.88
PRKCA-203ENST00000578063 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
PRKCA-203ENST00000578063 AGLP35573 1532 aa26.73■■□□□ 1.87
PRKCA-203ENST00000578063 E9PCH4 1651 aa26.72■■□□□ 1.87
PRKCA-203ENST00000578063 EFCAB6Q5THR3 1501 aa26.72■■□□□ 1.87
PRKCA-203ENST00000578063 PPP1R15AO75807 674 aaPredicted RBP26.71■■□□□ 1.87
PRKCA-203ENST00000578063 PLA2R1Q13018 1463 aa26.71■■□□□ 1.87
PRKCA-203ENST00000578063 GGT6Q6P531 493 aa26.7■■□□□ 1.87
PRKCA-203ENST00000578063 CCDC144AA2RUR9 1427 aa26.7■■□□□ 1.87
PRKCA-203ENST00000578063 ABCC3O15438 1527 aa26.68■■□□□ 1.86
PRKCA-203ENST00000578063 CEP152O94986 1710 aa26.67■■□□□ 1.86
PRKCA-203ENST00000578063 ZC3H13Q5T200 1668 aaKnown RBP26.67■■□□□ 1.86
PRKCA-203ENST00000578063 PTPRTO14522 1441 aa26.66■■□□□ 1.86
PRKCA-203ENST00000578063 TRPM2O94759 1503 aa26.65■■□□□ 1.86
PRKCA-203ENST00000578063 L3MBTL2Q969R5 705 aa26.64■■□□□ 1.85
PRKCA-203ENST00000578063 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
PRKCA-203ENST00000578063 SPHKAPQ2M3C7 1700 aa26.63■■□□□ 1.85
PRKCA-203ENST00000578063 CAMSAP1Q5T5Y3 1602 aa26.6■■□□□ 1.85
PRKCA-203ENST00000578063 PPP6R1Q9UPN7 881 aa26.59■■□□□ 1.85
PRKCA-203ENST00000578063 NPATQ14207 1427 aa26.57■■□□□ 1.84
PRKCA-203ENST00000578063 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
PRKCA-203ENST00000578063 ARHGAP31Q2M1Z3 1444 aa26.57■■□□□ 1.84
PRKCA-203ENST00000578063 ZNF316A6NFI3 1004 aaPredicted RBP26.53■■□□□ 1.84
PRKCA-203ENST00000578063 CLTCL1P53675 1640 aa26.51■■□□□ 1.84
PRKCA-203ENST00000578063 CNTLNQ9NXG0 1405 aa26.51■■□□□ 1.83
PRKCA-203ENST00000578063 NEURL4Q96JN8 1562 aa26.48■■□□□ 1.83
PRKCA-203ENST00000578063 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
PRKCA-203ENST00000578063 NOS1P29475 1434 aa26.47■■□□□ 1.83
PRKCA-203ENST00000578063 UHRF1BP1Q6BDS2 1440 aa26.46■■□□□ 1.83
PRKCA-203ENST00000578063 ARID4BQ4LE39 1312 aaPredicted RBP26.44■■□□□ 1.82
PRKCA-203ENST00000578063 MLECQ14165 292 aa26.42■■□□□ 1.82
PRKCA-203ENST00000578063 UGGT1Q9NYU2 1555 aa26.42■■□□□ 1.82
PRKCA-203ENST00000578063 NBPF8Q3BBV2 869 aa26.42■■□□□ 1.82
PRKCA-203ENST00000578063 CLTCQ00610 1675 aaKnown RBP26.42■■□□□ 1.82
PRKCA-203ENST00000578063 RGL3Q3MIN7 710 aa26.4■■□□□ 1.82
PRKCA-203ENST00000578063 DCAF11Q8TEB1 546 aa26.4■■□□□ 1.82
PRKCA-203ENST00000578063 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
PRKCA-203ENST00000578063 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
PRKCA-203ENST00000578063 SYNMO15061 1565 aa26.38■■□□□ 1.81
PRKCA-203ENST00000578063 ESF1Q9H501 851 aaKnown RBP26.37■■□□□ 1.81
PRKCA-203ENST00000578063 KIF1BO60333 1816 aa26.37■■□□□ 1.81
PRKCA-203ENST00000578063 PIK3C2BO00750 1634 aa26.36■■□□□ 1.81
PRKCA-203ENST00000578063 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
PRKCA-203ENST00000578063 ADGRB3O60242 1522 aa26.36■■□□□ 1.81
PRKCA-203ENST00000578063 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
PRKCA-203ENST00000578063 RALGAPBQ86X10 1494 aa26.35■■□□□ 1.81
PRKCA-203ENST00000578063 KDM2AQ9Y2K7 1162 aa26.34■■□□□ 1.81
PRKCA-203ENST00000578063 PRAG1Q86YV5 1406 aa26.34■■□□□ 1.81
PRKCA-203ENST00000578063 ZNF326Q5BKZ1 582 aaKnown RBP26.34■■□□□ 1.81
PRKCA-203ENST00000578063 SLC52A1Q9NWF4 448 aa26.32■■□□□ 1.8
PRKCA-203ENST00000578063 CFAP65Q6ZU64 1925 aaKnown RBP26.31■■□□□ 1.8
PRKCA-203ENST00000578063 SPATA31D1Q6ZQQ2 1576 aa26.31■■□□□ 1.8
PRKCA-203ENST00000578063 MROH2AA6NES4 1674 aa26.29■■□□□ 1.8
PRKCA-203ENST00000578063 ZMYM3Q14202 1370 aa26.28■■□□□ 1.8
PRKCA-203ENST00000578063 MYOM2P54296 1465 aa26.27■■□□□ 1.8
PRKCA-203ENST00000578063 EIF4G2P78344 907 aaKnown RBP eCLIP26.25■■□□□ 1.793e-7■■■■□ 22
PRKCA-203ENST00000578063 FBXO31Q5XUX0 539 aaPredicted RBP26.25■■□□□ 1.79
PRKCA-203ENST00000578063 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
PRKCA-203ENST00000578063 MADDQ8WXG6 1647 aa26.24■■□□□ 1.79
PRKCA-203ENST00000578063 CHGAP10645 457 aaKnown RBP26.23■■□□□ 1.79
PRKCA-203ENST00000578063 IFT172Q9UG01 1749 aa26.23■■□□□ 1.79
PRKCA-203ENST00000578063 IDI1Q13907 227 aa26.22■■□□□ 1.79
PRKCA-203ENST00000578063 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
PRKCA-203ENST00000578063 ROCK2O75116 1388 aaKnown RBP26.2■■□□□ 1.79
PRKCA-203ENST00000578063 HSPA5P11021 654 aaKnown RBP26.19■■□□□ 1.78
PRKCA-203ENST00000578063 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
PRKCA-203ENST00000578063 GPRASP1Q5JY77 1395 aa26.19■■□□□ 1.78
PRKCA-203ENST00000578063 TMEM131LA2VDJ0 1609 aa26.17■■□□□ 1.78
PRKCA-203ENST00000578063 LAMC1P11047 1609 aa26.17■■□□□ 1.78
PRKCA-203ENST00000578063 NRXN1Q9ULB1 1477 aa26.17■■□□□ 1.78
PRKCA-203ENST00000578063 DIEXFQ68CQ4 756 aaKnown RBP26.17■■□□□ 1.78
PRKCA-203ENST00000578063 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
PRKCA-203ENST00000578063 USP47Q96K76 1375 aa26.16■■□□□ 1.78
PRKCA-203ENST00000578063 PPLO60437 1756 aa26.16■■□□□ 1.78
PRKCA-203ENST00000578063 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms