RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.19
ABR-235ENST00000576964 EIF2AK4Q9P2K8 1649 aaKnown RBP16.26■□□□□ 0.19
ABR-235ENST00000576964 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
ABR-235ENST00000576964 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
ABR-235ENST00000576964 ANKRD50Q9ULJ7 1429 aa16.23■□□□□ 0.19
ABR-235ENST00000576964 KANK1Q14678 1352 aa16.23■□□□□ 0.19
ABR-235ENST00000576964 FAM135AQ9P2D6 1515 aa16.21■□□□□ 0.19
ABR-235ENST00000576964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
ABR-235ENST00000576964 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
ABR-235ENST00000576964 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
ABR-235ENST00000576964 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
ABR-235ENST00000576964 CLTCQ00610 1675 aaKnown RBP16.18■□□□□ 0.18
ABR-235ENST00000576964 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
ABR-235ENST00000576964 MROH2AA6NES4 1674 aa16.16■□□□□ 0.18
ABR-235ENST00000576964 PRDM15P57071 1507 aaPredicted RBP16.15■□□□□ 0.18
ABR-235ENST00000576964 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.18
ABR-235ENST00000576964 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
ABR-235ENST00000576964 ABCC3O15438 1527 aa16.13■□□□□ 0.17
ABR-235ENST00000576964 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
ABR-235ENST00000576964 NAIPQ13075 1403 aa16.12■□□□□ 0.17
ABR-235ENST00000576964 C3P01024 1663 aa16.12■□□□□ 0.17
ABR-235ENST00000576964 MROH1Q8NDA8 1641 aa16.12■□□□□ 0.17
ABR-235ENST00000576964 NPATQ14207 1427 aa16.11■□□□□ 0.17
ABR-235ENST00000576964 GCC2Q8IWJ2 1684 aa16.1■□□□□ 0.17
ABR-235ENST00000576964 PZPP20742 1482 aa16.1■□□□□ 0.17
ABR-235ENST00000576964 NUP155O75694 1391 aa16.09■□□□□ 0.17
ABR-235ENST00000576964 UHRF1BP1Q6BDS2 1440 aa16.09■□□□□ 0.17
ABR-235ENST00000576964 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
ABR-235ENST00000576964 ACIN1Q9UKV3 1341 aaKnown RBP16.08■□□□□ 0.16
ABR-235ENST00000576964 UNC13BO14795 1591 aa16.08■□□□□ 0.16
ABR-235ENST00000576964 CEP152O94986 1710 aa16.08■□□□□ 0.16
ABR-235ENST00000576964 CAMSAP1Q5T5Y3 1602 aa16.07■□□□□ 0.16
ABR-235ENST00000576964 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
ABR-235ENST00000576964 ARHGAP31Q2M1Z3 1444 aa16.05■□□□□ 0.16
ABR-235ENST00000576964 TNRQ92752 1358 aa16.05■□□□□ 0.16
ABR-235ENST00000576964 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
ABR-235ENST00000576964 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
ABR-235ENST00000576964 VWDEQ8N2E2 1590 aa16.04■□□□□ 0.16
ABR-235ENST00000576964 SETD5Q9C0A6 1442 aa16.03■□□□□ 0.16
ABR-235ENST00000576964 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
ABR-235ENST00000576964 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
ABR-235ENST00000576964 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
ABR-235ENST00000576964 IQGAP3Q86VI3 1631 aa16.01■□□□□ 0.15
ABR-235ENST00000576964 ERVK-7P63135 1459 aa16.01■□□□□ 0.15
ABR-235ENST00000576964 RPRD2Q5VT52 1461 aaKnown RBP16.01■□□□□ 0.15
ABR-235ENST00000576964 TET3O43151 1660 aa16.01■□□□□ 0.15
ABR-235ENST00000576964 NLRP1Q9C000 1473 aa15.99■□□□□ 0.15
ABR-235ENST00000576964 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
ABR-235ENST00000576964 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
ABR-235ENST00000576964 SPATA31D1Q6ZQQ2 1576 aa15.99■□□□□ 0.15
ABR-235ENST00000576964 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
ABR-235ENST00000576964 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
ABR-235ENST00000576964 HSPA2P54652 639 aa15.97■□□□□ 0.15
ABR-235ENST00000576964 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
ABR-235ENST00000576964 A2ML1A8K2U0 1454 aa15.97■□□□□ 0.15
ABR-235ENST00000576964 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.15
ABR-235ENST00000576964 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
ABR-235ENST00000576964 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
ABR-235ENST00000576964 PKD2Q13563 968 aa15.93■□□□□ 0.14
ABR-235ENST00000576964 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
ABR-235ENST00000576964 NOS1P29475 1434 aa15.93■□□□□ 0.14
ABR-235ENST00000576964 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
ABR-235ENST00000576964 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
ABR-235ENST00000576964 HRCP23327 699 aa15.92■□□□□ 0.14
ABR-235ENST00000576964 E9PCH4 1651 aa15.92■□□□□ 0.14
ABR-235ENST00000576964 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
ABR-235ENST00000576964 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
ABR-235ENST00000576964 IDI1Q13907 227 aa15.89■□□□□ 0.13
ABR-235ENST00000576964 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
ABR-235ENST00000576964 SYNMO15061 1565 aa15.88■□□□□ 0.13
ABR-235ENST00000576964 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
ABR-235ENST00000576964 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
ABR-235ENST00000576964 EID1Q9Y6B2 187 aa15.86■□□□□ 0.13
ABR-235ENST00000576964 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
ABR-235ENST00000576964 PTPRTO14522 1441 aa15.85■□□□□ 0.13
ABR-235ENST00000576964 PIK3C2BO00750 1634 aa15.84■□□□□ 0.13
ABR-235ENST00000576964 HDGFP51858 240 aaKnown RBP15.84■□□□□ 0.13
ABR-235ENST00000576964 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
ABR-235ENST00000576964 FOXD1Q16676 465 aa15.83■□□□□ 0.12
ABR-235ENST00000576964 NCKAP5LQ9HCH0 1330 aa15.83■□□□□ 0.12
ABR-235ENST00000576964 TRPM2O94759 1503 aa15.83■□□□□ 0.12
ABR-235ENST00000576964 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
ABR-235ENST00000576964 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
ABR-235ENST00000576964 CCDC144AA2RUR9 1427 aa15.81■□□□□ 0.12
ABR-235ENST00000576964 ZNF326Q5BKZ1 582 aaKnown RBP15.81■□□□□ 0.12
ABR-235ENST00000576964 TMEM2Q9UHN6 1383 aa15.8■□□□□ 0.12
ABR-235ENST00000576964 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
ABR-235ENST00000576964 TXNDC2Q86VQ3 553 aa15.8■□□□□ 0.12
ABR-235ENST00000576964 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
ABR-235ENST00000576964 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.78■□□□□ 0.12
ABR-235ENST00000576964 BCANQ96GW7 911 aa15.78■□□□□ 0.12
ABR-235ENST00000576964 SLIT1O75093 1534 aa15.78■□□□□ 0.12
ABR-235ENST00000576964 STRCQ7RTU9 1775 aa15.77■□□□□ 0.11
ABR-235ENST00000576964 POLR1AO95602 1720 aaPredicted RBP15.77■□□□□ 0.11
ABR-235ENST00000576964 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
ABR-235ENST00000576964 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
ABR-235ENST00000576964 ARHGAP23Q9P227 1491 aa15.76■□□□□ 0.11
ABR-235ENST00000576964 TMEM131LA2VDJ0 1609 aa15.76■□□□□ 0.11
ABR-235ENST00000576964 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
ABR-235ENST00000576964 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms