RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
NPLOC4-219ENST00000576713 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-219ENST00000576713 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
NPLOC4-219ENST00000576713 POGZQ7Z3K3 1410 aa14.88□□□□□ -0.03
NPLOC4-219ENST00000576713 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
NPLOC4-219ENST00000576713 ITSN2Q9NZM3 1697 aa14.87□□□□□ -0.03
NPLOC4-219ENST00000576713 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
NPLOC4-219ENST00000576713 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
NPLOC4-219ENST00000576713 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
NPLOC4-219ENST00000576713 YEATS2Q9ULM3 1422 aa14.84□□□□□ -0.03
NPLOC4-219ENST00000576713 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
NPLOC4-219ENST00000576713 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
NPLOC4-219ENST00000576713 KDM5CP41229 1560 aa14.84□□□□□ -0.03
NPLOC4-219ENST00000576713 SIGLEC1Q9BZZ2 1709 aa14.83□□□□□ -0.03
NPLOC4-219ENST00000576713 RGL2O15211 777 aa14.83□□□□□ -0.04
NPLOC4-219ENST00000576713 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
NPLOC4-219ENST00000576713 HNRNPMP52272 730 aaKnown RBP eCLIP14.82□□□□□ -0.04
NPLOC4-219ENST00000576713 CAMSAP2Q08AD1 1489 aa14.82□□□□□ -0.04
NPLOC4-219ENST00000576713 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
NPLOC4-219ENST00000576713 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
NPLOC4-219ENST00000576713 MYOM3Q5VTT5 1437 aa14.81□□□□□ -0.04
NPLOC4-219ENST00000576713 ZNF518AQ6AHZ1 1483 aa14.81□□□□□ -0.04
NPLOC4-219ENST00000576713 ZFYVE16Q7Z3T8 1539 aa14.79□□□□□ -0.04
NPLOC4-219ENST00000576713 KIAA1107Q9UPP5 1409 aa14.78□□□□□ -0.04
NPLOC4-219ENST00000576713 ABCA6Q8N139 1617 aa14.77□□□□□ -0.04
NPLOC4-219ENST00000576713 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.04
NPLOC4-219ENST00000576713 KIDINS220Q9ULH0 1771 aa14.77□□□□□ -0.05
NPLOC4-219ENST00000576713 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.05
NPLOC4-219ENST00000576713 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
NPLOC4-219ENST00000576713 PLEKHH2Q8IVE3 1493 aa14.76□□□□□ -0.05
NPLOC4-219ENST00000576713 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
NPLOC4-219ENST00000576713 INO80Q9ULG1 1556 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-219ENST00000576713 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
NPLOC4-219ENST00000576713 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
NPLOC4-219ENST00000576713 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
NPLOC4-219ENST00000576713 CHRM1P11229 460 aaPredicted RBP14.74□□□□□ -0.05
NPLOC4-219ENST00000576713 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
NPLOC4-219ENST00000576713 ARHGEF5Q12774 1597 aa14.72□□□□□ -0.05
NPLOC4-219ENST00000576713 ATP7AQ04656 1500 aa14.71□□□□□ -0.05
NPLOC4-219ENST00000576713 TCOF1Q13428 1488 aaKnown RBP14.71□□□□□ -0.05
NPLOC4-219ENST00000576713 CCDC141Q6ZP82 1450 aa14.71□□□□□ -0.05
NPLOC4-219ENST00000576713 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
NPLOC4-219ENST00000576713 ATP10AO60312 1499 aa14.7□□□□□ -0.06
NPLOC4-219ENST00000576713 SPAG9O60271 1321 aaKnown RBP14.69□□□□□ -0.06
NPLOC4-219ENST00000576713 PYGBP11216 843 aa14.69□□□□□ -0.06
NPLOC4-219ENST00000576713 C9orf84Q5VXU9 1444 aa14.68□□□□□ -0.06
NPLOC4-219ENST00000576713 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
NPLOC4-219ENST00000576713 ABCC5O15440 1437 aa14.67□□□□□ -0.06
NPLOC4-219ENST00000576713 REREQ9P2R6 1566 aa14.67□□□□□ -0.06
NPLOC4-219ENST00000576713 BCORL1Q5H9F3 1711 aa14.66□□□□□ -0.06
NPLOC4-219ENST00000576713 CROCC2H7BZ55 1655 aa14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 PLXNC1O60486 1568 aa14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 MYT1LQ9UL68 1186 aa14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 DNMT1P26358 1616 aaKnown RBP14.65□□□□□ -0.06
NPLOC4-219ENST00000576713 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
NPLOC4-219ENST00000576713 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-219ENST00000576713 RTEL1-TNFRSF6BF6WH68 1400 aa14.64□□□□□ -0.07
NPLOC4-219ENST00000576713 DAPK1P53355 1430 aa14.64□□□□□ -0.07
NPLOC4-219ENST00000576713 MADDQ8WXG6 1647 aa14.63□□□□□ -0.07
NPLOC4-219ENST00000576713 PTPRKQ15262 1439 aa14.63□□□□□ -0.07
NPLOC4-219ENST00000576713 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-219ENST00000576713 RIOK3O14730 519 aaKnown RBP14.62□□□□□ -0.07
NPLOC4-219ENST00000576713 A2MP01023 1474 aa14.62□□□□□ -0.07
NPLOC4-219ENST00000576713 AGLP35573 1532 aa14.61□□□□□ -0.07
NPLOC4-219ENST00000576713 MLECQ14165 292 aa14.61□□□□□ -0.07
NPLOC4-219ENST00000576713 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-219ENST00000576713 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
NPLOC4-219ENST00000576713 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
NPLOC4-219ENST00000576713 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
NPLOC4-219ENST00000576713 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.07
NPLOC4-219ENST00000576713 PTPRMP28827 1452 aa14.58□□□□□ -0.08
NPLOC4-219ENST00000576713 TSPY4P0CV99 314 aa14.57□□□□□ -0.08
NPLOC4-219ENST00000576713 TSPY10P0CW01 314 aa14.57□□□□□ -0.08
NPLOC4-219ENST00000576713 CHIC2Q9UKJ5 165 aa14.57□□□□□ -0.08
NPLOC4-219ENST00000576713 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
NPLOC4-219ENST00000576713 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
NPLOC4-219ENST00000576713 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-219ENST00000576713 ZRANB1Q9UGI0 708 aa14.55□□□□□ -0.08
NPLOC4-219ENST00000576713 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
NPLOC4-219ENST00000576713 FER1L4A9Z1Z3 1794 aa14.55□□□□□ -0.08
NPLOC4-219ENST00000576713 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
NPLOC4-219ENST00000576713 ADGRL2O95490 1459 aa14.54□□□□□ -0.08
NPLOC4-219ENST00000576713 NCOA1Q15788 1441 aa14.53□□□□□ -0.08
NPLOC4-219ENST00000576713 KIF15Q9NS87 1388 aa14.53□□□□□ -0.08
NPLOC4-219ENST00000576713 VGFO15240 615 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-219ENST00000576713 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
NPLOC4-219ENST00000576713 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.08
NPLOC4-219ENST00000576713 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.52□□□□□ -0.08
NPLOC4-219ENST00000576713 BBXQ8WY36 941 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-219ENST00000576713 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
NPLOC4-219ENST00000576713 ITGAEP38570 1179 aa14.51□□□□□ -0.09
NPLOC4-219ENST00000576713 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
NPLOC4-219ENST00000576713 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
NPLOC4-219ENST00000576713 RNF17Q9BXT8 1623 aaKnown RBP14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 KIF3BO15066 747 aa14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 GGT6Q6P531 493 aa14.49□□□□□ -0.09
NPLOC4-219ENST00000576713 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms