RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 NFKBIBQ15653 356 aa18.31■□□□□ 0.52
GTF2I-212ENST00000573035 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
GTF2I-212ENST00000573035 ARID3AQ99856 593 aa18.31■□□□□ 0.52
GTF2I-212ENST00000573035 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
GTF2I-212ENST00000573035 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
GTF2I-212ENST00000573035 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
GTF2I-212ENST00000573035 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
GTF2I-212ENST00000573035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.29■□□□□ 0.52
GTF2I-212ENST00000573035 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
GTF2I-212ENST00000573035 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
GTF2I-212ENST00000573035 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
GTF2I-212ENST00000573035 EXOC6Q8TAG9 804 aa18.28■□□□□ 0.52
GTF2I-212ENST00000573035 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
GTF2I-212ENST00000573035 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
GTF2I-212ENST00000573035 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
GTF2I-212ENST00000573035 ZNF330Q9Y3S2 320 aaPredicted RBP18.28■□□□□ 0.52
GTF2I-212ENST00000573035 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
GTF2I-212ENST00000573035 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
GTF2I-212ENST00000573035 GOLGA2Q08379 1002 aa18.25■□□□□ 0.51
GTF2I-212ENST00000573035 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
GTF2I-212ENST00000573035 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
GTF2I-212ENST00000573035 TNNT3P45378 269 aaPredicted RBP18.24■□□□□ 0.51
GTF2I-212ENST00000573035 MAP7D2Q96T17 732 aa18.24■□□□□ 0.51
GTF2I-212ENST00000573035 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
GTF2I-212ENST00000573035 GOLGA6L4A6NEF3 574 aa18.24■□□□□ 0.51
GTF2I-212ENST00000573035 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
GTF2I-212ENST00000573035 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
GTF2I-212ENST00000573035 MCCP23508 829 aa18.23■□□□□ 0.51
GTF2I-212ENST00000573035 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
GTF2I-212ENST00000573035 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
GTF2I-212ENST00000573035 MINK1Q8N4C8 1332 aaPredicted RBP18.21■□□□□ 0.51
GTF2I-212ENST00000573035 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
GTF2I-212ENST00000573035 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
GTF2I-212ENST00000573035 DRC7Q8IY82 874 aa18.21■□□□□ 0.51
GTF2I-212ENST00000573035 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
GTF2I-212ENST00000573035 TOPBP1Q92547 1522 aa18.19■□□□□ 0.5
GTF2I-212ENST00000573035 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
GTF2I-212ENST00000573035 MTERF4Q7Z6M4 381 aaKnown RBP18.19■□□□□ 0.5
GTF2I-212ENST00000573035 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
GTF2I-212ENST00000573035 MSH5O43196 834 aa18.19■□□□□ 0.5
GTF2I-212ENST00000573035 TERF2IPQ9NYB0 399 aa18.19■□□□□ 0.5
GTF2I-212ENST00000573035 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
GTF2I-212ENST00000573035 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
GTF2I-212ENST00000573035 RAPGEF3O95398 923 aa18.18■□□□□ 0.5
GTF2I-212ENST00000573035 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
GTF2I-212ENST00000573035 MRE11P49959 708 aa18.17■□□□□ 0.5
GTF2I-212ENST00000573035 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
GTF2I-212ENST00000573035 TPM2P07951 284 aa18.15■□□□□ 0.5
GTF2I-212ENST00000573035 AMPHP49418 695 aa18.15■□□□□ 0.5
GTF2I-212ENST00000573035 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
GTF2I-212ENST00000573035 FAM13BQ9NYF5 915 aa18.15■□□□□ 0.5
GTF2I-212ENST00000573035 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
GTF2I-212ENST00000573035 OS9Q13438 667 aaPredicted RBP18.14■□□□□ 0.49
GTF2I-212ENST00000573035 PHF14O94880 888 aa18.14■□□□□ 0.49
GTF2I-212ENST00000573035 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
GTF2I-212ENST00000573035 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
GTF2I-212ENST00000573035 CGNL1Q0VF96 1302 aa18.13■□□□□ 0.49
GTF2I-212ENST00000573035 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
GTF2I-212ENST00000573035 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
GTF2I-212ENST00000573035 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
GTF2I-212ENST00000573035 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
GTF2I-212ENST00000573035 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
GTF2I-212ENST00000573035 UBE2Q2Q8WVN8 375 aa18.11■□□□□ 0.49
GTF2I-212ENST00000573035 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
GTF2I-212ENST00000573035 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
GTF2I-212ENST00000573035 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
GTF2I-212ENST00000573035 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
GTF2I-212ENST00000573035 PLIN1O60240 522 aa18.09■□□□□ 0.49
GTF2I-212ENST00000573035 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
GTF2I-212ENST00000573035 APBB1O00213 710 aa18.09■□□□□ 0.49
GTF2I-212ENST00000573035 CUX1P39880 1505 aa18.07■□□□□ 0.48
GTF2I-212ENST00000573035 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
GTF2I-212ENST00000573035 PANK3Q9H999 370 aa18.07■□□□□ 0.48
GTF2I-212ENST00000573035 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
GTF2I-212ENST00000573035 BACH2Q9BYV9 841 aa18.06■□□□□ 0.48
GTF2I-212ENST00000573035 FGD6Q6ZV73 1430 aa18.06■□□□□ 0.48
GTF2I-212ENST00000573035 ISY1Q9ULR0 285 aaKnown RBP18.05■□□□□ 0.48
GTF2I-212ENST00000573035 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
GTF2I-212ENST00000573035 KCNJ4P48050 445 aa18.04■□□□□ 0.48
GTF2I-212ENST00000573035 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
GTF2I-212ENST00000573035 ST18O60284 1047 aa18.04■□□□□ 0.48
GTF2I-212ENST00000573035 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
GTF2I-212ENST00000573035 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
GTF2I-212ENST00000573035 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
GTF2I-212ENST00000573035 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
GTF2I-212ENST00000573035 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
GTF2I-212ENST00000573035 ZNF771Q7L3S4 317 aaPredicted RBP18.02■□□□□ 0.48
GTF2I-212ENST00000573035 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.47
GTF2I-212ENST00000573035 FGD1P98174 961 aa18.01■□□□□ 0.47
GTF2I-212ENST00000573035 ANKRD50Q9ULJ7 1429 aa18.01■□□□□ 0.47
GTF2I-212ENST00000573035 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
GTF2I-212ENST00000573035 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
GTF2I-212ENST00000573035 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
GTF2I-212ENST00000573035 KIF21BO75037 1637 aa18■□□□□ 0.47
GTF2I-212ENST00000573035 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
GTF2I-212ENST00000573035 NGEFQ8N5V2 710 aa18■□□□□ 0.47
GTF2I-212ENST00000573035 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
GTF2I-212ENST00000573035 PSME1Q06323 249 aa17.99■□□□□ 0.47
GTF2I-212ENST00000573035 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
GTF2I-212ENST00000573035 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms