RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.076e-8■■□□□ 14.5
NPLOC4-209ENST00000572760 MADDQ8WXG6 1647 aa21.73■■□□□ 1.07
NPLOC4-209ENST00000572760 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
NPLOC4-209ENST00000572760 RIMS1Q86UR5 1692 aaKnown RBP21.72■■□□□ 1.07
NPLOC4-209ENST00000572760 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
NPLOC4-209ENST00000572760 CLTCQ00610 1675 aaKnown RBP21.7■■□□□ 1.06
NPLOC4-209ENST00000572760 KANK1Q14678 1352 aa21.7■■□□□ 1.06
NPLOC4-209ENST00000572760 DEPDC5O75140 1603 aa21.69■■□□□ 1.06
NPLOC4-209ENST00000572760 KDM4FA0A1W2PPD8 638 aa21.69■■□□□ 1.06
NPLOC4-209ENST00000572760 WASHC2CQ9Y4E1 1318 aa21.69■■□□□ 1.06
NPLOC4-209ENST00000572760 CEP152O94986 1710 aa21.67■■□□□ 1.06
NPLOC4-209ENST00000572760 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
NPLOC4-209ENST00000572760 MROH1Q8NDA8 1641 aa21.66■■□□□ 1.06
NPLOC4-209ENST00000572760 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
NPLOC4-209ENST00000572760 PLPPR3Q6T4P5 718 aa21.66■■□□□ 1.06
NPLOC4-209ENST00000572760 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
NPLOC4-209ENST00000572760 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
NPLOC4-209ENST00000572760 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
NPLOC4-209ENST00000572760 UNC13BO14795 1591 aa21.65■■□□□ 1.06
NPLOC4-209ENST00000572760 PRDM15P57071 1507 aaPredicted RBP21.65■■□□□ 1.06
NPLOC4-209ENST00000572760 KDM5DQ9BY66 1539 aa21.65■■□□□ 1.06
NPLOC4-209ENST00000572760 FAM135AQ9P2D6 1515 aa21.64■■□□□ 1.05
NPLOC4-209ENST00000572760 MROH2AA6NES4 1674 aa21.63■■□□□ 1.05
NPLOC4-209ENST00000572760 NUP155O75694 1391 aa21.61■■□□□ 1.05
NPLOC4-209ENST00000572760 ABCC3O15438 1527 aa21.6■■□□□ 1.05
NPLOC4-209ENST00000572760 C3P01024 1663 aa21.6■■□□□ 1.05
NPLOC4-209ENST00000572760 PTPRMP28827 1452 aa21.59■■□□□ 1.05
NPLOC4-209ENST00000572760 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
NPLOC4-209ENST00000572760 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.05
NPLOC4-209ENST00000572760 ACIN1Q9UKV3 1341 aaKnown RBP21.58■■□□□ 1.05
NPLOC4-209ENST00000572760 ZMYM3Q14202 1370 aa21.58■■□□□ 1.04
NPLOC4-209ENST00000572760 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
NPLOC4-209ENST00000572760 IQGAP3Q86VI3 1631 aa21.57■■□□□ 1.04
NPLOC4-209ENST00000572760 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
NPLOC4-209ENST00000572760 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
NPLOC4-209ENST00000572760 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
NPLOC4-209ENST00000572760 TET3O43151 1660 aa21.55■■□□□ 1.04
NPLOC4-209ENST00000572760 AEBP2Q6ZN18 517 aaPredicted RBP21.54■■□□□ 1.04
NPLOC4-209ENST00000572760 LMTK2Q8IWU2 1503 aa21.53■■□□□ 1.04
NPLOC4-209ENST00000572760 HRCP23327 699 aa21.51■■□□□ 1.03
NPLOC4-209ENST00000572760 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
NPLOC4-209ENST00000572760 EFCAB6Q5THR3 1501 aa21.5■■□□□ 1.03
NPLOC4-209ENST00000572760 PZPP20742 1482 aa21.49■■□□□ 1.03
NPLOC4-209ENST00000572760 ARHGAP31Q2M1Z3 1444 aa21.47■■□□□ 1.03
NPLOC4-209ENST00000572760 E9PCH4 1651 aa21.47■■□□□ 1.03
NPLOC4-209ENST00000572760 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
NPLOC4-209ENST00000572760 FBXO31Q5XUX0 539 aaPredicted RBP21.46■■□□□ 1.03
NPLOC4-209ENST00000572760 MPHOSPH9Q99550 1183 aa21.45■■□□□ 1.02
NPLOC4-209ENST00000572760 NPATQ14207 1427 aa21.45■■□□□ 1.02
NPLOC4-209ENST00000572760 PKD2Q13563 968 aa21.43■■□□□ 1.02
NPLOC4-209ENST00000572760 RPRD2Q5VT52 1461 aaKnown RBP21.43■■□□□ 1.02
NPLOC4-209ENST00000572760 ERVK-7P63135 1459 aa21.42■■□□□ 1.02
NPLOC4-209ENST00000572760 TNRQ92752 1358 aa21.41■■□□□ 1.02
NPLOC4-209ENST00000572760 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
NPLOC4-209ENST00000572760 SPHKAPQ2M3C7 1700 aa21.39■■□□□ 1.01
NPLOC4-209ENST00000572760 UHRF1BP1Q6BDS2 1440 aa21.36■■□□□ 1.01
NPLOC4-209ENST00000572760 MYO3AQ8NEV4 1616 aa21.36■■□□□ 1.01
NPLOC4-209ENST00000572760 FOXD1Q16676 465 aa21.35■■□□□ 1.01
NPLOC4-209ENST00000572760 NOS1P29475 1434 aa21.34■■□□□ 1.01
NPLOC4-209ENST00000572760 SYNMO15061 1565 aa21.32■■□□□ 1
NPLOC4-209ENST00000572760 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
NPLOC4-209ENST00000572760 STAG3Q9UJ98 1225 aa21.31■■□□□ 1
NPLOC4-209ENST00000572760 NLRP1Q9C000 1473 aa21.31■■□□□ 1
NPLOC4-209ENST00000572760 ZNF142P52746 1687 aaPredicted RBP21.29■■□□□ 1
NPLOC4-209ENST00000572760 CEP170BQ9Y4F5 1589 aaPredicted RBP21.29■■□□□ 1
NPLOC4-209ENST00000572760 PTPRTO14522 1441 aa21.29■■□□□ 1
NPLOC4-209ENST00000572760 A2ML1A8K2U0 1454 aa21.28■■□□□ 1
NPLOC4-209ENST00000572760 KIF1BO60333 1816 aa21.28■■□□□ 1
NPLOC4-209ENST00000572760 IDI1Q13907 227 aa21.28■■□□□ 1
NPLOC4-209ENST00000572760 PIK3C2BO00750 1634 aa21.27■■□□□ 1
NPLOC4-209ENST00000572760 CHGAP10645 457 aaKnown RBP21.27■■□□□ 1
NPLOC4-209ENST00000572760 TRPM2O94759 1503 aa21.27■■□□□ 1
NPLOC4-209ENST00000572760 UGGT1Q9NYU2 1555 aa21.26■□□□□ 0.99
NPLOC4-209ENST00000572760 MYO5BQ9ULV0 1848 aa21.25■□□□□ 0.99
NPLOC4-209ENST00000572760 LMTK3Q96Q04 1460 aa21.24■□□□□ 0.99
NPLOC4-209ENST00000572760 UBR1Q8IWV7 1749 aa21.24■□□□□ 0.99
NPLOC4-209ENST00000572760 CLTCL1P53675 1640 aa21.23■□□□□ 0.99
NPLOC4-209ENST00000572760 THEMISQ8N1K5 641 aaPredicted RBP21.23■□□□□ 0.99
NPLOC4-209ENST00000572760 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
NPLOC4-209ENST00000572760 DHX57Q6P158 1386 aaKnown RBP21.23■□□□□ 0.99
NPLOC4-209ENST00000572760 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
NPLOC4-209ENST00000572760 HSPA2P54652 639 aa21.22■□□□□ 0.99
NPLOC4-209ENST00000572760 KDM5AP29375 1690 aaKnown RBP21.21■□□□□ 0.99
NPLOC4-209ENST00000572760 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
NPLOC4-209ENST00000572760 ANKRD30BQ9BXX2 1392 aa21.19■□□□□ 0.98
NPLOC4-209ENST00000572760 TMEM131LA2VDJ0 1609 aa21.18■□□□□ 0.98
NPLOC4-209ENST00000572760 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
NPLOC4-209ENST00000572760 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
NPLOC4-209ENST00000572760 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
NPLOC4-209ENST00000572760 ANKLE2Q86XL3 938 aa21.11■□□□□ 0.97
NPLOC4-209ENST00000572760 EID1Q9Y6B2 187 aa21.11■□□□□ 0.97
NPLOC4-209ENST00000572760 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
NPLOC4-209ENST00000572760 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
NPLOC4-209ENST00000572760 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
NPLOC4-209ENST00000572760 TXNDC2Q86VQ3 553 aa21.09■□□□□ 0.97
NPLOC4-209ENST00000572760 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
NPLOC4-209ENST00000572760 SLIT1O75093 1534 aa21.08■□□□□ 0.96
NPLOC4-209ENST00000572760 STRCQ7RTU9 1775 aa21.08■□□□□ 0.96
NPLOC4-209ENST00000572760 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
NPLOC4-209ENST00000572760 RIMS2Q9UQ26 1411 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms