RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 DHX29Q7Z478 1369 aaKnown RBP14.61□□□□□ -0.07
TOM1L1-210ENST00000572158 ANKRD50Q9ULJ7 1429 aa14.61□□□□□ -0.07
TOM1L1-210ENST00000572158 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
TOM1L1-210ENST00000572158 ATP10AO60312 1499 aa14.61□□□□□ -0.07
TOM1L1-210ENST00000572158 A2MP01023 1474 aa14.61□□□□□ -0.07
TOM1L1-210ENST00000572158 ERBINQ96RT1 1412 aa14.58□□□□□ -0.08
TOM1L1-210ENST00000572158 REREQ9P2R6 1566 aa14.57□□□□□ -0.08
TOM1L1-210ENST00000572158 HRCP23327 699 aa14.56□□□□□ -0.08
TOM1L1-210ENST00000572158 BCORL1Q5H9F3 1711 aa14.54□□□□□ -0.08
TOM1L1-210ENST00000572158 EIF2AK4Q9P2K8 1649 aaKnown RBP14.54□□□□□ -0.08
TOM1L1-210ENST00000572158 KIF3BO15066 747 aa14.53□□□□□ -0.08
TOM1L1-210ENST00000572158 MROH1Q8NDA8 1641 aa14.53□□□□□ -0.08
TOM1L1-210ENST00000572158 AGLP35573 1532 aa14.53□□□□□ -0.08
TOM1L1-210ENST00000572158 UNC13BO14795 1591 aa14.52□□□□□ -0.09
TOM1L1-210ENST00000572158 DEPDC5O75140 1603 aa14.52□□□□□ -0.09
TOM1L1-210ENST00000572158 RNF17Q9BXT8 1623 aaKnown RBP14.5□□□□□ -0.09
TOM1L1-210ENST00000572158 PZPP20742 1482 aa14.49□□□□□ -0.09
TOM1L1-210ENST00000572158 VWDEQ8N2E2 1590 aa14.48□□□□□ -0.09
TOM1L1-210ENST00000572158 NUP155O75694 1391 aa14.48□□□□□ -0.09
TOM1L1-210ENST00000572158 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
TOM1L1-210ENST00000572158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.094e-8■■□□□ 13.9
TOM1L1-210ENST00000572158 PRDM15P57071 1507 aaPredicted RBP14.48□□□□□ -0.09
TOM1L1-210ENST00000572158 KDM5DQ9BY66 1539 aa14.48□□□□□ -0.09
TOM1L1-210ENST00000572158 GGT6Q6P531 493 aa14.47□□□□□ -0.09
TOM1L1-210ENST00000572158 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.09
TOM1L1-210ENST00000572158 IQGAP3Q86VI3 1631 aa14.45□□□□□ -0.1
TOM1L1-210ENST00000572158 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
TOM1L1-210ENST00000572158 MLECQ14165 292 aa14.45□□□□□ -0.1
TOM1L1-210ENST00000572158 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
TOM1L1-210ENST00000572158 MPHOSPH9Q99550 1183 aa14.44□□□□□ -0.1
TOM1L1-210ENST00000572158 ABCC3O15438 1527 aa14.42□□□□□ -0.1
TOM1L1-210ENST00000572158 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
TOM1L1-210ENST00000572158 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
TOM1L1-210ENST00000572158 CEP152O94986 1710 aa14.41□□□□□ -0.1
TOM1L1-210ENST00000572158 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
TOM1L1-210ENST00000572158 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
TOM1L1-210ENST00000572158 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
TOM1L1-210ENST00000572158 KANK1Q14678 1352 aa14.4□□□□□ -0.1
TOM1L1-210ENST00000572158 PKD2Q13563 968 aa14.39□□□□□ -0.11
TOM1L1-210ENST00000572158 TET3O43151 1660 aa14.38□□□□□ -0.11
TOM1L1-210ENST00000572158 E9PCH4 1651 aa14.38□□□□□ -0.11
TOM1L1-210ENST00000572158 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
TOM1L1-210ENST00000572158 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
TOM1L1-210ENST00000572158 EFCAB6Q5THR3 1501 aa14.36□□□□□ -0.11
TOM1L1-210ENST00000572158 ZC3H13Q5T200 1668 aaKnown RBP14.36□□□□□ -0.11
TOM1L1-210ENST00000572158 ADAMTSL3P82987 1691 aa14.36□□□□□ -0.11
TOM1L1-210ENST00000572158 NPATQ14207 1427 aa14.36□□□□□ -0.11
TOM1L1-210ENST00000572158 PLA2R1Q13018 1463 aa14.35□□□□□ -0.11
TOM1L1-210ENST00000572158 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
TOM1L1-210ENST00000572158 ANKRD30BQ9BXX2 1392 aa14.33□□□□□ -0.11
TOM1L1-210ENST00000572158 MADDQ8WXG6 1647 aa14.33□□□□□ -0.11
TOM1L1-210ENST00000572158 ARHGAP31Q2M1Z3 1444 aa14.33□□□□□ -0.11
TOM1L1-210ENST00000572158 ZMYM3Q14202 1370 aa14.33□□□□□ -0.12
TOM1L1-210ENST00000572158 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
TOM1L1-210ENST00000572158 FBXO31Q5XUX0 539 aaPredicted RBP14.31□□□□□ -0.12
TOM1L1-210ENST00000572158 PTPRTO14522 1441 aa14.31□□□□□ -0.12
TOM1L1-210ENST00000572158 CFAP65Q6ZU64 1925 aaKnown RBP14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 CNTLNQ9NXG0 1405 aa14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 RPRD2Q5VT52 1461 aaKnown RBP14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
TOM1L1-210ENST00000572158 NOS1P29475 1434 aa14.29□□□□□ -0.12
TOM1L1-210ENST00000572158 RIMS1Q86UR5 1692 aaKnown RBP14.29□□□□□ -0.12
TOM1L1-210ENST00000572158 C3P01024 1663 aa14.28□□□□□ -0.12
TOM1L1-210ENST00000572158 KDM4FA0A1W2PPD8 638 aa14.28□□□□□ -0.12
TOM1L1-210ENST00000572158 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
TOM1L1-210ENST00000572158 SPHKAPQ2M3C7 1700 aa14.27□□□□□ -0.12
TOM1L1-210ENST00000572158 PREX1Q8TCU6 1659 aa14.27□□□□□ -0.13
TOM1L1-210ENST00000572158 SYNMO15061 1565 aa14.27□□□□□ -0.13
TOM1L1-210ENST00000572158 UGGT1Q9NYU2 1555 aa14.27□□□□□ -0.13
TOM1L1-210ENST00000572158 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
TOM1L1-210ENST00000572158 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
TOM1L1-210ENST00000572158 TRPM2O94759 1503 aa14.26□□□□□ -0.13
TOM1L1-210ENST00000572158 ERVK-7P63135 1459 aa14.26□□□□□ -0.13
TOM1L1-210ENST00000572158 SPATA31D1Q6ZQQ2 1576 aa14.25□□□□□ -0.13
TOM1L1-210ENST00000572158 CLTCL1P53675 1640 aa14.24□□□□□ -0.13
TOM1L1-210ENST00000572158 PTPRMP28827 1452 aa14.23□□□□□ -0.13
TOM1L1-210ENST00000572158 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
TOM1L1-210ENST00000572158 PIK3C2BO00750 1634 aa14.22□□□□□ -0.13
TOM1L1-210ENST00000572158 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
TOM1L1-210ENST00000572158 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.14
TOM1L1-210ENST00000572158 IDI1Q13907 227 aa14.2□□□□□ -0.14
TOM1L1-210ENST00000572158 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
TOM1L1-210ENST00000572158 TNRQ92752 1358 aa14.19□□□□□ -0.14
TOM1L1-210ENST00000572158 SPATA31E1Q6ZUB1 1445 aa14.18□□□□□ -0.14
TOM1L1-210ENST00000572158 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
TOM1L1-210ENST00000572158 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
TOM1L1-210ENST00000572158 ADGRB3O60242 1522 aa14.14□□□□□ -0.15
TOM1L1-210ENST00000572158 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
TOM1L1-210ENST00000572158 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
TOM1L1-210ENST00000572158 MYO3AQ8NEV4 1616 aa14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 RGL3Q3MIN7 710 aa14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 KIF1BO60333 1816 aa14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 MYO5BQ9ULV0 1848 aa14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
TOM1L1-210ENST00000572158 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
TOM1L1-210ENST00000572158 A2ML1A8K2U0 1454 aa14.11□□□□□ -0.15
TOM1L1-210ENST00000572158 SETD1BQ9UPS6 1966 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms