RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 ZBED2Q9BTP6 218 aa8.11□□□□□ -1.11
CDC27-211ENST00000570740 VPS9D1Q9Y2B5 631 aa8.11□□□□□ -1.11
CDC27-211ENST00000570740 PPP1R3GB7ZBB8 358 aa8.08□□□□□ -1.12
CDC27-211ENST00000570740 COL9A1P20849 921 aa8.07□□□□□ -1.12
CDC27-211ENST00000570740 NBR1Q14596 966 aa8.07□□□□□ -1.12
CDC27-211ENST00000570740 C6orf132Q5T0Z8 1188 aa8.07□□□□□ -1.12
CDC27-211ENST00000570740 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
CDC27-211ENST00000570740 BHMG1C9JSJ3 638 aaPredicted RBP8.06□□□□□ -1.12
CDC27-211ENST00000570740 EN1Q05925 392 aaPredicted RBP8.06□□□□□ -1.12
CDC27-211ENST00000570740 KCNV2Q8TDN2 545 aa8.06□□□□□ -1.12
CDC27-211ENST00000570740 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
CDC27-211ENST00000570740 STAC3Q96MF2 364 aa8.05□□□□□ -1.12
CDC27-211ENST00000570740 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CDC27-211ENST00000570740 MAP3K7O43318 606 aa8.03□□□□□ -1.12
CDC27-211ENST00000570740 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
CDC27-211ENST00000570740 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
CDC27-211ENST00000570740 OSBPP22059 807 aa8.02□□□□□ -1.13
CDC27-211ENST00000570740 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.13
CDC27-211ENST00000570740 TSR1Q2NL82 804 aaKnown RBP8.02□□□□□ -1.13
CDC27-211ENST00000570740 P3H3Q8IVL6 736 aa8.02□□□□□ -1.13
CDC27-211ENST00000570740 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
CDC27-211ENST00000570740 ONECUT3O60422 494 aaPredicted RBP8.01□□□□□ -1.13
CDC27-211ENST00000570740 NBPF3Q9H094 633 aa8□□□□□ -1.13
CDC27-211ENST00000570740 MRPL50Q8N5N7 158 aaKnown RBP7.99□□□□□ -1.13
CDC27-211ENST00000570740 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
CDC27-211ENST00000570740 HCSTQ9UBK5 93 aa7.99□□□□□ -1.13
CDC27-211ENST00000570740 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
CDC27-211ENST00000570740 KIAA1468Q9P260 1216 aa7.98□□□□□ -1.13
CDC27-211ENST00000570740 MLLT3P42568 568 aaPredicted RBP7.97□□□□□ -1.13
CDC27-211ENST00000570740 CERKQ8TCT0 537 aa7.97□□□□□ -1.13
CDC27-211ENST00000570740 GOLGA8CPA6NN73 597 aa7.96□□□□□ -1.14
CDC27-211ENST00000570740 LAPTM4BQ86VI4 370 aa7.96□□□□□ -1.14
CDC27-211ENST00000570740 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.14
CDC27-211ENST00000570740 CDHR5Q9HBB8 845 aa7.95□□□□□ -1.14
CDC27-211ENST00000570740 PRSS12P56730 875 aa7.94□□□□□ -1.14
CDC27-211ENST00000570740 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
CDC27-211ENST00000570740 WNT2BQ93097 391 aa7.94□□□□□ -1.14
CDC27-211ENST00000570740 CDCA7LQ96GN5 454 aa7.94□□□□□ -1.14
CDC27-211ENST00000570740 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
CDC27-211ENST00000570740 PACS2Q86VP3 889 aa7.93□□□□□ -1.14
CDC27-211ENST00000570740 SEMA3EO15041 775 aa7.92□□□□□ -1.14
CDC27-211ENST00000570740 NPDC1Q9NQX5 325 aaPredicted RBP7.92□□□□□ -1.14
CDC27-211ENST00000570740 SEPT9Q9UHD8 586 aaPredicted RBP7.92□□□□□ -1.14
CDC27-211ENST00000570740 VSIG10Q8N0Z9 540 aa7.91□□□□□ -1.14
CDC27-211ENST00000570740 RBM27Q9P2N5 1060 aaKnown RBP7.91□□□□□ -1.14
CDC27-211ENST00000570740 FAM198AQ9UFP1 575 aa7.91□□□□□ -1.14
CDC27-211ENST00000570740 PTPN5P54829 565 aa7.9□□□□□ -1.14
CDC27-211ENST00000570740 FAM98CQ17RN3 349 aaKnown RBP7.9□□□□□ -1.14
CDC27-211ENST00000570740 ANKK1Q8NFD2 765 aa7.9□□□□□ -1.14
CDC27-211ENST00000570740 ZFRQ96KR1 1074 aaKnown RBP7.9□□□□□ -1.14
CDC27-211ENST00000570740 SOWAHBA6NEL2 793 aa7.88□□□□□ -1.15
CDC27-211ENST00000570740 TTC13Q8NBP0 860 aa7.88□□□□□ -1.15
CDC27-211ENST00000570740 TESPA1A2RU30 521 aaPredicted RBP7.87□□□□□ -1.15
CDC27-211ENST00000570740 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
CDC27-211ENST00000570740 C3orf80F5H4A9 247 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 SMAPO00193 183 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 BCAMP50895 628 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 PTGDRQ13258 359 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 TATDN2Q93075 761 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 PNMA3Q9UL41 463 aa7.86□□□□□ -1.15
CDC27-211ENST00000570740 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
CDC27-211ENST00000570740 SMYD5Q6GMV2 418 aa7.84□□□□□ -1.15
CDC27-211ENST00000570740 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
CDC27-211ENST00000570740 NUTM2FA1L443 756 aa7.83□□□□□ -1.16
CDC27-211ENST00000570740 LRCH3Q96II8 777 aa7.83□□□□□ -1.16
CDC27-211ENST00000570740 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
CDC27-211ENST00000570740 NYAP1Q6ZVC0 841 aa7.81□□□□□ -1.16
CDC27-211ENST00000570740 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
CDC27-211ENST00000570740 FCHSD2O94868 740 aa7.8□□□□□ -1.16
CDC27-211ENST00000570740 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
CDC27-211ENST00000570740 SAMD7Q7Z3H4 446 aa7.8□□□□□ -1.16
CDC27-211ENST00000570740 EYA1Q99502 592 aa7.8□□□□□ -1.16
CDC27-211ENST00000570740 WBP1LQ9NX94 342 aa7.8□□□□□ -1.16
CDC27-211ENST00000570740 HPS5Q9UPZ3 1129 aa7.79□□□□□ -1.16
CDC27-211ENST00000570740 HDGFP51858 240 aaKnown RBP7.77□□□□□ -1.17
CDC27-211ENST00000570740 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
CDC27-211ENST00000570740 ADGRG1Q9Y653 693 aa7.77□□□□□ -1.17
CDC27-211ENST00000570740 PPP4CP60510 307 aa7.76□□□□□ -1.17
CDC27-211ENST00000570740 HIC1Q14526 733 aa7.76□□□□□ -1.17
CDC27-211ENST00000570740 ITGBL1O95965 494 aaPredicted RBP7.75□□□□□ -1.17
CDC27-211ENST00000570740 GPR37O15354 613 aa7.74□□□□□ -1.17
CDC27-211ENST00000570740 SWT1Q5T5J6 900 aaKnown RBP7.74□□□□□ -1.17
CDC27-211ENST00000570740 RBM46Q8TBY0 533 aaKnown RBP7.74□□□□□ -1.17
CDC27-211ENST00000570740 GNPATO15228 680 aa7.73□□□□□ -1.17
CDC27-211ENST00000570740 DNAJB2P25686 324 aa7.73□□□□□ -1.17
CDC27-211ENST00000570740 FAM161AQ3B820 660 aa7.73□□□□□ -1.17
CDC27-211ENST00000570740 SLF2Q8IX21 1173 aa7.73□□□□□ -1.17
CDC27-211ENST00000570740 RCCD1A6NED2 376 aa7.71□□□□□ -1.18
CDC27-211ENST00000570740 RNF40O75150 1001 aa7.71□□□□□ -1.18
CDC27-211ENST00000570740 GPIHBP1Q8IV16 184 aa7.71□□□□□ -1.18
CDC27-211ENST00000570740 OATP04181 439 aa7.7□□□□□ -1.18
CDC27-211ENST00000570740 FECHP22830 423 aa7.7□□□□□ -1.18
CDC27-211ENST00000570740 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
CDC27-211ENST00000570740 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
CDC27-211ENST00000570740 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
CDC27-211ENST00000570740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
CDC27-211ENST00000570740 TULP1O00294 542 aaPredicted RBP7.69□□□□□ -1.18
CDC27-211ENST00000570740 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
CDC27-211ENST00000570740 KCNC4Q03721 635 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms