RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 PZPP20742 1482 aa23.1■■□□□ 1.29
VAC14-210ENST00000568548 NUP155O75694 1391 aa23.1■■□□□ 1.29
VAC14-210ENST00000568548 SKAP1Q86WV1 359 aa23.1■■□□□ 1.29
VAC14-210ENST00000568548 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
VAC14-210ENST00000568548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■□□□ 11.6
VAC14-210ENST00000568548 ARHGAP5Q13017 1502 aa23.08■■□□□ 1.29
VAC14-210ENST00000568548 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
VAC14-210ENST00000568548 ERICH6BQ5W0A0 696 aa23.08■■□□□ 1.29
VAC14-210ENST00000568548 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.29
VAC14-210ENST00000568548 NOP58Q9Y2X3 529 aaKnown RBP23.07■■□□□ 1.28
VAC14-210ENST00000568548 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
VAC14-210ENST00000568548 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
VAC14-210ENST00000568548 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
VAC14-210ENST00000568548 RSPH4AQ5TD94 716 aa23.03■■□□□ 1.28
VAC14-210ENST00000568548 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
VAC14-210ENST00000568548 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
VAC14-210ENST00000568548 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
VAC14-210ENST00000568548 PLIN1O60240 522 aa23.02■■□□□ 1.28
VAC14-210ENST00000568548 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
VAC14-210ENST00000568548 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
VAC14-210ENST00000568548 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
VAC14-210ENST00000568548 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
VAC14-210ENST00000568548 BCORL1Q5H9F3 1711 aa22.99■■□□□ 1.27
VAC14-210ENST00000568548 SMG6Q86US8 1419 aaKnown RBP22.98■■□□□ 1.27
VAC14-210ENST00000568548 ANP32AP39687 249 aaKnown RBP22.97■■□□□ 1.27
VAC14-210ENST00000568548 PLCH2O75038 1416 aa22.95■■□□□ 1.26
VAC14-210ENST00000568548 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
VAC14-210ENST00000568548 PLEKHH2Q8IVE3 1493 aa22.93■■□□□ 1.26
VAC14-210ENST00000568548 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
VAC14-210ENST00000568548 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
VAC14-210ENST00000568548 ARHGEF12Q9NZN5 1544 aa22.91■■□□□ 1.26
VAC14-210ENST00000568548 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
VAC14-210ENST00000568548 LAS1LQ9Y4W2 734 aaKnown RBP22.89■■□□□ 1.26
VAC14-210ENST00000568548 RCAN3Q9UKA8 241 aa22.88■■□□□ 1.25
VAC14-210ENST00000568548 MAST1Q9Y2H9 1570 aa22.88■■□□□ 1.25
VAC14-210ENST00000568548 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
VAC14-210ENST00000568548 RRP1P56182 461 aaKnown RBP22.87■■□□□ 1.25
VAC14-210ENST00000568548 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
VAC14-210ENST00000568548 IPO9Q96P70 1041 aaKnown RBP22.86■■□□□ 1.25
VAC14-210ENST00000568548 MYBBP1AQ9BQG0 1328 aaKnown RBP22.85■■□□□ 1.25
VAC14-210ENST00000568548 WDR7Q9Y4E6 1490 aa22.85■■□□□ 1.25
VAC14-210ENST00000568548 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
VAC14-210ENST00000568548 ABCC1P33527 1531 aa22.82■■□□□ 1.24
VAC14-210ENST00000568548 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
VAC14-210ENST00000568548 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
VAC14-210ENST00000568548 PLXNC1O60486 1568 aa22.81■■□□□ 1.24
VAC14-210ENST00000568548 PANK3Q9H999 370 aa22.8■■□□□ 1.24
VAC14-210ENST00000568548 RTN4Q9NQC3 1192 aaKnown RBP22.78■■□□□ 1.24
VAC14-210ENST00000568548 AFAP1Q8N556 730 aa22.78■■□□□ 1.24
VAC14-210ENST00000568548 RALBP1Q15311 655 aa22.77■■□□□ 1.24
VAC14-210ENST00000568548 C20orf194Q5TEA3 1177 aa22.77■■□□□ 1.24
VAC14-210ENST00000568548 ASXL2Q76L83 1435 aa22.77■■□□□ 1.23
VAC14-210ENST00000568548 DUOX2Q9NRD8 1548 aa22.76■■□□□ 1.23
VAC14-210ENST00000568548 NLRP13Q86W25 1043 aa22.76■■□□□ 1.23
VAC14-210ENST00000568548 KDM5CP41229 1560 aa22.76■■□□□ 1.23
VAC14-210ENST00000568548 PDE4AP27815 886 aa22.75■■□□□ 1.23
VAC14-210ENST00000568548 ARAP3Q8WWN8 1544 aa22.75■■□□□ 1.23
VAC14-210ENST00000568548 SPAG9O60271 1321 aaKnown RBP22.75■■□□□ 1.23
VAC14-210ENST00000568548 UNC13BO14795 1591 aa22.75■■□□□ 1.23
VAC14-210ENST00000568548 SLC4A3P48751 1232 aa22.75■■□□□ 1.23
VAC14-210ENST00000568548 CRBNQ96SW2 442 aa22.74■■□□□ 1.23
VAC14-210ENST00000568548 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
VAC14-210ENST00000568548 KTN1Q86UP2 1357 aaKnown RBP22.73■■□□□ 1.23
VAC14-210ENST00000568548 FANCAO15360 1455 aa22.72■■□□□ 1.23
VAC14-210ENST00000568548 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
VAC14-210ENST00000568548 ABCA9Q8IUA7 1624 aa22.71■■□□□ 1.23
VAC14-210ENST00000568548 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
VAC14-210ENST00000568548 ERBINQ96RT1 1412 aa22.71■■□□□ 1.23
VAC14-210ENST00000568548 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.23
VAC14-210ENST00000568548 DISP3Q9P2K9 1392 aa22.7■■□□□ 1.22
VAC14-210ENST00000568548 ARID4BQ4LE39 1312 aaPredicted RBP22.69■■□□□ 1.22
VAC14-210ENST00000568548 RALGAPBQ86X10 1494 aa22.69■■□□□ 1.22
VAC14-210ENST00000568548 ADAMTS8Q9UP79 889 aa22.68■■□□□ 1.22
VAC14-210ENST00000568548 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
VAC14-210ENST00000568548 CCDC144AA2RUR9 1427 aa22.67■■□□□ 1.22
VAC14-210ENST00000568548 NEFMP07197 916 aa22.66■■□□□ 1.22
VAC14-210ENST00000568548 MYT1LQ9UL68 1186 aa22.66■■□□□ 1.22
VAC14-210ENST00000568548 RTEL1-TNFRSF6BF6WH68 1400 aa22.66■■□□□ 1.22
VAC14-210ENST00000568548 ZFYVE16Q7Z3T8 1539 aa22.65■■□□□ 1.22
VAC14-210ENST00000568548 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.22
VAC14-210ENST00000568548 UHRF1BP1Q6BDS2 1440 aa22.64■■□□□ 1.22
VAC14-210ENST00000568548 ADGRL1O94910 1474 aa22.64■■□□□ 1.22
VAC14-210ENST00000568548 PLA2R1Q13018 1463 aa22.64■■□□□ 1.22
VAC14-210ENST00000568548 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
VAC14-210ENST00000568548 TESK2Q96S53 571 aa22.64■■□□□ 1.21
VAC14-210ENST00000568548 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
VAC14-210ENST00000568548 IL27Q8NEV9 243 aa22.61■■□□□ 1.21
VAC14-210ENST00000568548 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
VAC14-210ENST00000568548 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
VAC14-210ENST00000568548 TCERG1O14776 1098 aaKnown RBP22.59■■□□□ 1.21
VAC14-210ENST00000568548 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
VAC14-210ENST00000568548 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.2
VAC14-210ENST00000568548 RGS3P49796 1198 aa22.58■■□□□ 1.2
VAC14-210ENST00000568548 SENP3Q9H4L4 574 aaPredicted RBP22.57■■□□□ 1.2
VAC14-210ENST00000568548 TMF1P82094 1093 aa22.56■■□□□ 1.2
VAC14-210ENST00000568548 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
VAC14-210ENST00000568548 INO80Q9ULG1 1556 aaPredicted RBP22.56■■□□□ 1.2
VAC14-210ENST00000568548 KNSTRNQ9Y448 316 aa22.54■■□□□ 1.2
VAC14-210ENST00000568548 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
VAC14-210ENST00000568548 WDR43Q15061 677 aaKnown RBP eCLIP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms