RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	DEPDC5	O75140	1603 aa		12.93	□□□□□ -0.34
LYRM1-208	ENST00000567954	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.93	□□□□□ -0.34
LYRM1-208	ENST00000567954	FGD6	Q6ZV73	1430 aa		12.93	□□□□□ -0.34
LYRM1-208	ENST00000567954	AFF2	P51816	1311 aa		12.92	□□□□□ -0.34
LYRM1-208	ENST00000567954	QTRT2	Q9H974	415 aa	Known RBP	12.92	□□□□□ -0.34
LYRM1-208	ENST00000567954	SENP3-EIF4A1	A0A087X0R7	540 aa		12.91	□□□□□ -0.34
LYRM1-208	ENST00000567954	ROBO1	Q9Y6N7	1651 aa		12.91	□□□□□ -0.34
LYRM1-208	ENST00000567954	FAM135A	Q9P2D6	1515 aa		12.91	□□□□□ -0.34
LYRM1-208	ENST00000567954	SUPT5H	O00267	1087 aa	Known RBP	12.9	□□□□□ -0.34
LYRM1-208	ENST00000567954	TMEM94	Q12767	1356 aa		12.9	□□□□□ -0.34
LYRM1-208	ENST00000567954	LRRC9	Q6ZRR7	1453 aa		12.9	□□□□□ -0.34
LYRM1-208	ENST00000567954	LRP5	O75197	1615 aa		12.89	□□□□□ -0.35
LYRM1-208	ENST00000567954	SLAIN2	Q9P270	581 aa		12.89	□□□□□ -0.35
LYRM1-208	ENST00000567954	CLTC	Q00610	1675 aa	Known RBP	12.89	□□□□□ -0.35
LYRM1-208	ENST00000567954	ARHGAP5	Q13017	1502 aa		12.88	□□□□□ -0.35
LYRM1-208	ENST00000567954	NGLY1	Q96IV0	654 aa		12.88	□□□□□ -0.35
LYRM1-208	ENST00000567954	IQGAP1	P46940	1657 aa		12.88	□□□□□ -0.35
LYRM1-208	ENST00000567954	UGGT1	Q9NYU2	1555 aa		12.86	□□□□□ -0.35
LYRM1-208	ENST00000567954	MIA2	Q96PC5	1412 aa		12.85	□□□□□ -0.35
LYRM1-208	ENST00000567954	SAMD9	Q5K651	1589 aa		12.85	□□□□□ -0.35
LYRM1-208	ENST00000567954	NLRP1	Q9C000	1473 aa		12.85	□□□□□ -0.35
LYRM1-208	ENST00000567954	EP400	Q96L91	3159 aa		12.83	□□□□□ -0.36
LYRM1-208	ENST00000567954	KIDINS220	Q9ULH0	1771 aa		12.83	□□□□□ -0.36
LYRM1-208	ENST00000567954	HRC	P23327	699 aa		12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	PRX	Q9BXM0	1461 aa		12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	SPAG9	O60271	1321 aa	Known RBP	12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	ATP7A	Q04656	1500 aa		12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	PHLPP1	O60346	1717 aa		12.82	□□□□□ -0.36
LYRM1-208	ENST00000567954	PROSER2	Q86WR7	435 aa	Predicted RBP	12.81	□□□□□ -0.36
LYRM1-208	ENST00000567954	MYO5C	Q9NQX4	1742 aa		12.8	□□□□□ -0.36
LYRM1-208	ENST00000567954	COL16A1	Q07092	1604 aa	Predicted RBP	12.8	□□□□□ -0.36
LYRM1-208	ENST00000567954	A2M	P01023	1474 aa		12.79	□□□□□ -0.36
LYRM1-208	ENST00000567954	PZP	P20742	1482 aa		12.79	□□□□□ -0.36
LYRM1-208	ENST00000567954	KCNA6	P17658	529 aa		12.79	□□□□□ -0.36
LYRM1-208	ENST00000567954	ITSN2	Q9NZM3	1697 aa		12.79	□□□□□ -0.36
LYRM1-208	ENST00000567954	C8orf37	Q96NL8	207 aa		12.78	□□□□□ -0.36
LYRM1-208	ENST00000567954	MSH6	P52701	1360 aa		12.78	□□□□□ -0.36
LYRM1-208	ENST00000567954	XIRP1	Q702N8	1843 aa	Known RBP	12.77	□□□□□ -0.37
LYRM1-208	ENST00000567954	MAP3K1	Q13233	1512 aa		12.77	□□□□□ -0.37
LYRM1-208	ENST00000567954	LTK	P29376	864 aa		12.76	□□□□□ -0.37
LYRM1-208	ENST00000567954	C1QTNF8	P60827	252 aa		12.76	□□□□□ -0.37
LYRM1-208	ENST00000567954	TXNDC2	Q86VQ3	553 aa		12.76	□□□□□ -0.37
LYRM1-208	ENST00000567954	PLXNC1	O60486	1568 aa		12.76	□□□□□ -0.37
LYRM1-208	ENST00000567954	NWD1	Q149M9	1564 aa		12.76	□□□□□ -0.37
LYRM1-208	ENST00000567954	NHSL1	Q5SYE7	1610 aa		12.75	□□□□□ -0.37
LYRM1-208	ENST00000567954	SCAF11	Q99590	1463 aa	Known RBP	12.75	□□□□□ -0.37
LYRM1-208	ENST00000567954	PSD	A5PKW4	1024 aa	Predicted RBP	12.74	□□□□□ -0.37
LYRM1-208	ENST00000567954	DEFB132	Q7Z7B7	95 aa		12.74	□□□□□ -0.37
LYRM1-208	ENST00000567954	ZC3H13	Q5T200	1668 aa	Known RBP	12.73	□□□□□ -0.37
LYRM1-208	ENST00000567954	SAMD9L	Q8IVG5	1584 aa		12.73	□□□□□ -0.37
LYRM1-208	ENST00000567954	BLM	P54132	1417 aa	Predicted RBP	12.73	□□□□□ -0.37
LYRM1-208	ENST00000567954	RANGAP1	P46060	587 aa	Predicted RBP	12.72	□□□□□ -0.37
LYRM1-208	ENST00000567954	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.72	□□□□□ -0.37
LYRM1-208	ENST00000567954	TRO	Q12816	1431 aa	Predicted RBP	12.71	□□□□□ -0.37
LYRM1-208	ENST00000567954	WASHC2C	Q9Y4E1	1318 aa		12.71	□□□□□ -0.37
LYRM1-208	ENST00000567954	TRPC5	Q9UL62	973 aa	Predicted RBP	12.71	□□□□□ -0.37
LYRM1-208	ENST00000567954	EID1	Q9Y6B2	187 aa		12.7	□□□□□ -0.38
LYRM1-208	ENST00000567954	PRDM15	P57071	1507 aa	Predicted RBP	12.7	□□□□□ -0.38
LYRM1-208	ENST00000567954	SHPRH	Q149N8	1683 aa		12.7	□□□□□ -0.38
LYRM1-208	ENST00000567954	KIF14	Q15058	1648 aa		12.7	□□□□□ -0.38
LYRM1-208	ENST00000567954	CEP350	Q5VT06	3117 aa		12.69	□□□□□ -0.38
LYRM1-208	ENST00000567954	ABCC3	O15438	1527 aa		12.69	□□□□□ -0.38
LYRM1-208	ENST00000567954	BCL9L	Q86UU0	1499 aa		12.69	□□□□□ -0.38
LYRM1-208	ENST00000567954	CLIP1	P30622	1438 aa		12.69	□□□□□ -0.38
LYRM1-208	ENST00000567954	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
LYRM1-208	ENST00000567954	SF3B2	Q13435	895 aa	Known RBP	12.68	□□□□□ -0.38
LYRM1-208	ENST00000567954	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.68	□□□□□ -0.38
LYRM1-208	ENST00000567954	DCAF8L1	A6NGE4	600 aa		12.67	□□□□□ -0.38
LYRM1-208	ENST00000567954	USP21	Q9UK80	565 aa		12.67	□□□□□ -0.38
LYRM1-208	ENST00000567954	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.66	□□□□□ -0.38
LYRM1-208	ENST00000567954	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.65	□□□□□ -0.38
LYRM1-208	ENST00000567954	ARHGAP23	Q9P227	1491 aa		12.65	□□□□□ -0.38
LYRM1-208	ENST00000567954	TIAM1	Q13009	1591 aa		12.64	□□□□□ -0.39
LYRM1-208	ENST00000567954	KIF3B	O15066	747 aa		12.64	□□□□□ -0.39
LYRM1-208	ENST00000567954	NCOA2	Q15596	1464 aa		12.64	□□□□□ -0.39
LYRM1-208	ENST00000567954	SLC34A2	O95436	690 aa		12.63	□□□□□ -0.39
LYRM1-208	ENST00000567954	LRRC59	Q96AG4	307 aa	Known RBP	12.63	□□□□□ -0.39
LYRM1-208	ENST00000567954	DHX29	Q7Z478	1369 aa	Known RBP	12.63	□□□□□ -0.39
LYRM1-208	ENST00000567954	NKTR	P30414	1462 aa	Known RBP	12.63	□□□□□ -0.39
LYRM1-208	ENST00000567954	DIP2A	Q14689	1571 aa		12.63	□□□□□ -0.39
LYRM1-208	ENST00000567954	SETD5	Q9C0A6	1442 aa		12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	CDC42BPB	Q9Y5S2	1711 aa		12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	CADPS2	Q86UW7	1296 aa		12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	SLC26A8	Q96RN1	970 aa		12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	SLIT1	O75093	1534 aa		12.62	□□□□□ -0.39
LYRM1-208	ENST00000567954	ADAMTS2	O95450	1211 aa		12.61	□□□□□ -0.39
LYRM1-208	ENST00000567954	BRINP3	Q76B58	766 aa		12.61	□□□□□ -0.39
LYRM1-208	ENST00000567954	ATRN	O75882	1429 aa		12.6	□□□□□ -0.39
LYRM1-208	ENST00000567954	KIAA1107	Q9UPP5	1409 aa		12.6	□□□□□ -0.39
LYRM1-208	ENST00000567954	R3HDM1	Q15032	1099 aa	Known RBP	12.59	□□□□□ -0.39
LYRM1-208	ENST00000567954	CHIC1	Q5VXU3	224 aa		12.59	□□□□□ -0.39
LYRM1-208	ENST00000567954	UTRN	P46939	3433 aa		12.59	□□□□□ -0.39
LYRM1-208	ENST00000567954	NCOA3	Q9Y6Q9	1424 aa		12.58	□□□□□ -0.4
LYRM1-208	ENST00000567954	PREX2	Q70Z35	1606 aa		12.58	□□□□□ -0.4
LYRM1-208	ENST00000567954	SYCP2	Q9BX26	1530 aa		12.57	□□□□□ -0.4
LYRM1-208	ENST00000567954	INO80	Q9ULG1	1556 aa	Predicted RBP	12.57	□□□□□ -0.4
LYRM1-208	ENST00000567954	ATF3	P18847	181 aa		12.57	□□□□□ -0.4
LYRM1-208	ENST00000567954	C19orf44	Q9H6X5	657 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms