RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 EID1Q9Y6B2 187 aa7.99□□□□□ -1.13
CDH13-209ENST00000567109 PLCB2Q00722 1185 aa7.98□□□□□ -1.13
CDH13-209ENST00000567109 AFAP1Q8N556 730 aa7.98□□□□□ -1.13
CDH13-209ENST00000567109 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.98□□□□□ -1.13
CDH13-209ENST00000567109 NRDCO43847 1150 aa7.98□□□□□ -1.13
CDH13-209ENST00000567109 RAB3GAP2Q9H2M9 1393 aa7.98□□□□□ -1.13
CDH13-209ENST00000567109 MAPK8IP3Q9UPT6 1336 aa7.98□□□□□ -1.13
CDH13-209ENST00000567109 L1TD1Q5T7N2 865 aaKnown RBP7.98□□□□□ -1.13
CDH13-209ENST00000567109 ASXL2Q76L83 1435 aa7.97□□□□□ -1.13
CDH13-209ENST00000567109 NUP153P49790 1475 aaKnown RBP7.97□□□□□ -1.13
CDH13-209ENST00000567109 DISP1Q96F81 1524 aa7.96□□□□□ -1.14
CDH13-209ENST00000567109 DDX10Q13206 875 aaKnown RBP7.96□□□□□ -1.14
CDH13-209ENST00000567109 PNNQ9H307 717 aaKnown RBP7.96□□□□□ -1.14
CDH13-209ENST00000567109 ZNF644Q9H582 1327 aaPredicted RBP7.96□□□□□ -1.14
CDH13-209ENST00000567109 WDR7Q9Y4E6 1490 aa7.96□□□□□ -1.14
CDH13-209ENST00000567109 SOX12O15370 315 aa7.96□□□□□ -1.14
CDH13-209ENST00000567109 RGL3Q3MIN7 710 aa7.96□□□□□ -1.14
CDH13-209ENST00000567109 CNKSR2Q8WXI2 1034 aa7.96□□□□□ -1.14
CDH13-209ENST00000567109 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.14
CDH13-209ENST00000567109 THOC2Q8NI27 1593 aaKnown RBP7.95□□□□□ -1.14
CDH13-209ENST00000567109 VGFO15240 615 aaPredicted RBP7.95□□□□□ -1.14
CDH13-209ENST00000567109 HFM1A2PYH4 1435 aa7.95□□□□□ -1.14
CDH13-209ENST00000567109 EIF4G3O43432 1585 aaKnown RBP7.95□□□□□ -1.14
CDH13-209ENST00000567109 DHX29Q7Z478 1369 aaKnown RBP7.95□□□□□ -1.14
CDH13-209ENST00000567109 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
CDH13-209ENST00000567109 KNSTRNQ9Y448 316 aa7.95□□□□□ -1.14
CDH13-209ENST00000567109 ATP10BO94823 1461 aa7.95□□□□□ -1.14
CDH13-209ENST00000567109 CARD11Q9BXL7 1154 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
CDH13-209ENST00000567109 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 ADGRL1O94910 1474 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 MRS2Q9HD23 443 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 PAK3O75914 559 aaPredicted RBP7.94□□□□□ -1.14
CDH13-209ENST00000567109 CCDC141Q6ZP82 1450 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 UNC13AQ9UPW8 1703 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 PTMSP20962 102 aa7.94□□□□□ -1.14
CDH13-209ENST00000567109 RPGRIP1LQ68CZ1 1315 aa7.93□□□□□ -1.14
CDH13-209ENST00000567109 GOLGA6L4A6NEF3 574 aa7.93□□□□□ -1.14
CDH13-209ENST00000567109 PPP4R2Q9NY27 417 aa7.93□□□□□ -1.14
CDH13-209ENST00000567109 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
CDH13-209ENST00000567109 C9orf84Q5VXU9 1444 aa7.93□□□□□ -1.14
CDH13-209ENST00000567109 CCDC144AA2RUR9 1427 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 SLC52A1Q9NWF4 448 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 HSP90AB1P08238 724 aaKnown RBP7.92□□□□□ -1.14
CDH13-209ENST00000567109 DAPK1P53355 1430 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 CEP170Q5SW79 1584 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 EIF3AQ14152 1382 aaKnown RBP7.92□□□□□ -1.14
CDH13-209ENST00000567109 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 PDE4CQ08493 712 aa7.92□□□□□ -1.14
CDH13-209ENST00000567109 CFAP44Q96MT7 982 aa7.91□□□□□ -1.14
CDH13-209ENST00000567109 DRC7Q8IY82 874 aa7.91□□□□□ -1.14
CDH13-209ENST00000567109 CHMP4BQ9H444 224 aaKnown RBP7.91□□□□□ -1.14
CDH13-209ENST00000567109 RTF1Q92541 710 aaKnown RBP7.91□□□□□ -1.14
CDH13-209ENST00000567109 KDM5BQ9UGL1 1544 aa7.91□□□□□ -1.14
CDH13-209ENST00000567109 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
CDH13-209ENST00000567109 TIAM1Q13009 1591 aa7.91□□□□□ -1.14
CDH13-209ENST00000567109 TARBP1Q13395 1621 aaKnown RBP7.91□□□□□ -1.14
CDH13-209ENST00000567109 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
CDH13-209ENST00000567109 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
CDH13-209ENST00000567109 RAPGEF3O95398 923 aa7.9□□□□□ -1.14
CDH13-209ENST00000567109 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
CDH13-209ENST00000567109 DCAF11Q8TEB1 546 aa7.9□□□□□ -1.14
CDH13-209ENST00000567109 RTEL1-TNFRSF6BF6WH68 1400 aa7.9□□□□□ -1.14
CDH13-209ENST00000567109 NEO1Q92859 1461 aa7.9□□□□□ -1.14
CDH13-209ENST00000567109 TAF7LQ5H9L4 462 aa7.9□□□□□ -1.15
CDH13-209ENST00000567109 AMER1Q5JTC6 1135 aaPredicted RBP7.89□□□□□ -1.15
CDH13-209ENST00000567109 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
CDH13-209ENST00000567109 CDK13Q14004 1512 aaKnown RBP7.89□□□□□ -1.15
CDH13-209ENST00000567109 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
CDH13-209ENST00000567109 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
CDH13-209ENST00000567109 MCCP23508 829 aa7.89□□□□□ -1.15
CDH13-209ENST00000567109 ANO8Q9HCE9 1232 aaPredicted RBP7.89□□□□□ -1.15
CDH13-209ENST00000567109 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
CDH13-209ENST00000567109 FANCAO15360 1455 aa7.89□□□□□ -1.15
CDH13-209ENST00000567109 TMF1P82094 1093 aa7.88□□□□□ -1.15
CDH13-209ENST00000567109 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
CDH13-209ENST00000567109 ABCC5O15440 1437 aa7.88□□□□□ -1.15
CDH13-209ENST00000567109 CWC22Q9HCG8 908 aaKnown RBP7.88□□□□□ -1.15
CDH13-209ENST00000567109 CHMP3Q9Y3E7 222 aa7.88□□□□□ -1.15
CDH13-209ENST00000567109 MSH5O43196 834 aa7.88□□□□□ -1.15
CDH13-209ENST00000567109 NOP58Q9Y2X3 529 aaKnown RBP7.88□□□□□ -1.15
CDH13-209ENST00000567109 FANCIQ9NVI1 1328 aa7.88□□□□□ -1.15
CDH13-209ENST00000567109 FBXO3Q9UK99 471 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 TCEAL9Q9UHQ7 104 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 GPATCH8Q9UKJ3 1502 aaKnown RBP7.87□□□□□ -1.15
CDH13-209ENST00000567109 MIER1Q8N108 512 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 ABCC10Q5T3U5 1492 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 GORABQ5T7V8 394 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 CEP89Q96ST8 783 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 SRPK2P78362 688 aaKnown RBP7.87□□□□□ -1.15
CDH13-209ENST00000567109 IRX6P78412 446 aaPredicted RBP7.87□□□□□ -1.15
CDH13-209ENST00000567109 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
CDH13-209ENST00000567109 SUPT16HQ9Y5B9 1047 aaKnown RBP7.86□□□□□ -1.15
CDH13-209ENST00000567109 FRAT2O75474 233 aaPredicted RBP7.86□□□□□ -1.15
CDH13-209ENST00000567109 KIAA1211Q6ZU35 1233 aa7.86□□□□□ -1.15
CDH13-209ENST00000567109 TCOF1Q13428 1488 aaKnown RBP7.86□□□□□ -1.15
CDH13-209ENST00000567109 L3MBTL2Q969R5 705 aa7.85□□□□□ -1.15
CDH13-209ENST00000567109 GTF2E1P29083 439 aaPredicted RBP7.85□□□□□ -1.15
CDH13-209ENST00000567109 FRAT1Q92837 279 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms