RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 BCORL1Q5H9F3 1711 aa25.82■■□□□ 1.72
MSLN-207ENST00000566549 FAM9BQ8IZU0 186 aa25.82■■□□□ 1.72
MSLN-207ENST00000566549 PLXNC1O60486 1568 aa25.8■■□□□ 1.72
MSLN-207ENST00000566549 AFAP1Q8N556 730 aa25.79■■□□□ 1.72
MSLN-207ENST00000566549 UNC13BO14795 1591 aa25.79■■□□□ 1.72
MSLN-207ENST00000566549 ST20-MTHFSA0A0A6YYL1 179 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 DUOX2Q9NRD8 1548 aa25.78■■□□□ 1.72
MSLN-207ENST00000566549 ABCC1P33527 1531 aa25.77■■□□□ 1.72
MSLN-207ENST00000566549 ROCK2O75116 1388 aaKnown RBP25.77■■□□□ 1.72
MSLN-207ENST00000566549 NEFLP07196 543 aa25.76■■□□□ 1.71
MSLN-207ENST00000566549 POLR1AO95602 1720 aaPredicted RBP25.76■■□□□ 1.71
MSLN-207ENST00000566549 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
MSLN-207ENST00000566549 ERBINQ96RT1 1412 aa25.73■■□□□ 1.71
MSLN-207ENST00000566549 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
MSLN-207ENST00000566549 WDR7Q9Y4E6 1490 aa25.71■■□□□ 1.71
MSLN-207ENST00000566549 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.71
MSLN-207ENST00000566549 PRAG1Q86YV5 1406 aa25.69■■□□□ 1.7
MSLN-207ENST00000566549 NBPF1Q3BBV0 1214 aa25.69■■□□□ 1.7
MSLN-207ENST00000566549 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
MSLN-207ENST00000566549 A2MP01023 1474 aa25.67■■□□□ 1.7
MSLN-207ENST00000566549 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
MSLN-207ENST00000566549 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
MSLN-207ENST00000566549 FANCAO15360 1455 aa25.63■■□□□ 1.69
MSLN-207ENST00000566549 ZFYVE16Q7Z3T8 1539 aa25.61■■□□□ 1.69
MSLN-207ENST00000566549 ASXL2Q76L83 1435 aa25.59■■□□□ 1.69
MSLN-207ENST00000566549 IRX6P78412 446 aaPredicted RBP25.59■■□□□ 1.69
MSLN-207ENST00000566549 TRPM1Q7Z4N2 1603 aa25.59■■□□□ 1.69
MSLN-207ENST00000566549 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.69
MSLN-207ENST00000566549 RTEL1-TNFRSF6BF6WH68 1400 aa25.58■■□□□ 1.69
MSLN-207ENST00000566549 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 ATP10AO60312 1499 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 ADGRL1O94910 1474 aa25.56■■□□□ 1.68
MSLN-207ENST00000566549 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 KIF3BO15066 747 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
MSLN-207ENST00000566549 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 ABCA9Q8IUA7 1624 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 ATP7AQ04656 1500 aa25.52■■□□□ 1.68
MSLN-207ENST00000566549 GPRASP1Q5JY77 1395 aa25.51■■□□□ 1.67
MSLN-207ENST00000566549 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
MSLN-207ENST00000566549 TSHZ2Q9NRE2 1034 aa25.49■■□□□ 1.67
MSLN-207ENST00000566549 E9PCH4 1651 aa25.49■■□□□ 1.67
MSLN-207ENST00000566549 TMC1Q8TDI8 760 aa25.48■■□□□ 1.67
MSLN-207ENST00000566549 INO80Q9ULG1 1556 aaPredicted RBP25.46■■□□□ 1.67
MSLN-207ENST00000566549 DISP3Q9P2K9 1392 aa25.45■■□□□ 1.67
MSLN-207ENST00000566549 TESK2Q96S53 571 aa25.45■■□□□ 1.67
MSLN-207ENST00000566549 KANK1Q14678 1352 aa25.45■■□□□ 1.66
MSLN-207ENST00000566549 PRDM15P57071 1507 aaPredicted RBP25.44■■□□□ 1.66
MSLN-207ENST00000566549 EIF2AK4Q9P2K8 1649 aaKnown RBP25.42■■□□□ 1.66
MSLN-207ENST00000566549 TRPM2O94759 1503 aa25.42■■□□□ 1.66
MSLN-207ENST00000566549 PNISRQ8TF01 805 aaKnown RBP25.41■■□□□ 1.66
MSLN-207ENST00000566549 MYBBP1AQ9BQG0 1328 aaKnown RBP25.4■■□□□ 1.66
MSLN-207ENST00000566549 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
MSLN-207ENST00000566549 DEPDC5O75140 1603 aa25.4■■□□□ 1.66
MSLN-207ENST00000566549 PTPRTO14522 1441 aa25.39■■□□□ 1.65
MSLN-207ENST00000566549 RALBP1Q15311 655 aa25.38■■□□□ 1.65
MSLN-207ENST00000566549 CLTCL1P53675 1640 aa25.37■■□□□ 1.65
MSLN-207ENST00000566549 TMF1P82094 1093 aa25.37■■□□□ 1.65
MSLN-207ENST00000566549 LAMC1P11047 1609 aa25.36■■□□□ 1.65
MSLN-207ENST00000566549 SPHKAPQ2M3C7 1700 aa25.35■■□□□ 1.65
MSLN-207ENST00000566549 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
MSLN-207ENST00000566549 KTN1Q86UP2 1357 aaKnown RBP25.35■■□□□ 1.65
MSLN-207ENST00000566549 TET3O43151 1660 aa25.35■■□□□ 1.65
MSLN-207ENST00000566549 PER1O15534 1290 aaPredicted RBP25.34■■□□□ 1.65
MSLN-207ENST00000566549 CD109Q6YHK3 1445 aa25.34■■□□□ 1.65
MSLN-207ENST00000566549 PANK3Q9H999 370 aa25.34■■□□□ 1.65
MSLN-207ENST00000566549 MADDQ8WXG6 1647 aa25.33■■□□□ 1.64
MSLN-207ENST00000566549 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 UGGT1Q9NYU2 1555 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
MSLN-207ENST00000566549 BRD4O60885 1362 aaPredicted RBP25.32■■□□□ 1.64
MSLN-207ENST00000566549 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
MSLN-207ENST00000566549 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
MSLN-207ENST00000566549 KIDINS220Q9ULH0 1771 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 PARD3Q8TEW0 1356 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 CEP152O94986 1710 aa25.29■■□□□ 1.64
MSLN-207ENST00000566549 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
MSLN-207ENST00000566549 GGT6Q6P531 493 aa25.27■■□□□ 1.64
MSLN-207ENST00000566549 LRPPRCP42704 1394 aaKnown RBP25.25■■□□□ 1.63
MSLN-207ENST00000566549 POGZQ7Z3K3 1410 aa25.24■■□□□ 1.63
MSLN-207ENST00000566549 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
MSLN-207ENST00000566549 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
MSLN-207ENST00000566549 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
MSLN-207ENST00000566549 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
MSLN-207ENST00000566549 CFAP70Q5T0N1 1121 aa25.23■■□□□ 1.63
MSLN-207ENST00000566549 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 SCAF11Q99590 1463 aaKnown RBP25.22■■□□□ 1.63
MSLN-207ENST00000566549 EFCAB6Q5THR3 1501 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 ADGRF5Q8IZF2 1346 aa25.22■■□□□ 1.63
MSLN-207ENST00000566549 STAC3Q96MF2 364 aa25.21■■□□□ 1.63
MSLN-207ENST00000566549 PPRC1Q5VV67 1664 aaKnown RBP25.19■■□□□ 1.62
MSLN-207ENST00000566549 PPP4R2Q9NY27 417 aa25.18■■□□□ 1.62
MSLN-207ENST00000566549 IQGAP1P46940 1657 aa25.18■■□□□ 1.62
MSLN-207ENST00000566549 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 B4GALNT3Q6L9W6 998 aa25.16■■□□□ 1.62
MSLN-207ENST00000566549 FRMPD1Q5SYB0 1578 aa25.15■■□□□ 1.62
MSLN-207ENST00000566549 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.61
MSLN-207ENST00000566549 MLH3Q9UHC1 1453 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms