RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 TTLL12Q14166 644 aaPredicted RBP5.68□□□□□ -1.5
CYCSP39-201ENST00000565821 PCDHGA4Q9Y5G9 962 aa5.68□□□□□ -1.5
CYCSP39-201ENST00000565821 CECR2Q9BXF3 1484 aa5.67□□□□□ -1.5
CYCSP39-201ENST00000565821 PRIM1P49642 420 aaKnown RBP5.67□□□□□ -1.5
CYCSP39-201ENST00000565821 EN1Q05925 392 aaPredicted RBP5.67□□□□□ -1.5
CYCSP39-201ENST00000565821 TYW1BQ6NUM6 668 aa5.67□□□□□ -1.5
CYCSP39-201ENST00000565821 SLAIN1Q8ND83 568 aa5.67□□□□□ -1.5
CYCSP39-201ENST00000565821 POTEMA6NI47 508 aa5.66□□□□□ -1.5
CYCSP39-201ENST00000565821 RIMBP2O15034 1052 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 AMHR2Q16671 573 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 DOK7Q18PE1 504 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 FBXW7Q969H0 707 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 DDRGK1Q96HY6 314 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 FAM117AQ9C073 453 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 CDHR5Q9HBB8 845 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 PCDHGA10Q9Y5H3 936 aa5.65□□□□□ -1.5
CYCSP39-201ENST00000565821 TSR1Q2NL82 804 aaKnown RBP5.64□□□□□ -1.51
CYCSP39-201ENST00000565821 PARP9Q8IXQ6 854 aa5.64□□□□□ -1.51
CYCSP39-201ENST00000565821 ZNF454Q8N9F8 522 aa5.64□□□□□ -1.51
CYCSP39-201ENST00000565821 NUDT7P0C024 238 aa5.63□□□□□ -1.51
CYCSP39-201ENST00000565821 ZNF710Q8N1W2 664 aa5.63□□□□□ -1.51
CYCSP39-201ENST00000565821 JPH4Q96JJ6 628 aa5.63□□□□□ -1.51
CYCSP39-201ENST00000565821 ARSIQ5FYB1 569 aa5.62□□□□□ -1.51
CYCSP39-201ENST00000565821 ZDHHC16Q969W1 377 aa5.62□□□□□ -1.51
CYCSP39-201ENST00000565821 SCUBE2Q9NQ36 999 aa5.62□□□□□ -1.51
CYCSP39-201ENST00000565821 ATP1B4Q9UN42 357 aaPredicted RBP5.62□□□□□ -1.51
CYCSP39-201ENST00000565821 FOSBP53539 338 aa5.61□□□□□ -1.51
CYCSP39-201ENST00000565821 GIGYF2Q6Y7W6 1299 aaKnown RBP5.61□□□□□ -1.51
CYCSP39-201ENST00000565821 CERKQ8TCT0 537 aa5.61□□□□□ -1.51
CYCSP39-201ENST00000565821 KHSRPQ92945 711 aaKnown RBP eCLIP5.61□□□□□ -1.51
CYCSP39-201ENST00000565821 NPDC1Q9NQX5 325 aaPredicted RBP5.61□□□□□ -1.51
CYCSP39-201ENST00000565821 CLCN1P35523 988 aa5.6□□□□□ -1.51
CYCSP39-201ENST00000565821 MDM2Q00987 491 aaPredicted RBP5.6□□□□□ -1.51
CYCSP39-201ENST00000565821 C6orf132Q5T0Z8 1188 aa5.6□□□□□ -1.51
CYCSP39-201ENST00000565821 POTEGQ6S5H5 508 aa5.6□□□□□ -1.51
CYCSP39-201ENST00000565821 MAMSTRQ6ZN01 415 aa5.6□□□□□ -1.51
CYCSP39-201ENST00000565821 OATP04181 439 aa5.59□□□□□ -1.51
CYCSP39-201ENST00000565821 FAM161AQ3B820 660 aa5.59□□□□□ -1.51
CYCSP39-201ENST00000565821 PLEKHG3A1L390 1219 aa5.58□□□□□ -1.52
CYCSP39-201ENST00000565821 PADI6Q6TGC4 694 aa5.58□□□□□ -1.52
CYCSP39-201ENST00000565821 ZSWIM6Q9HCJ5 1215 aa5.58□□□□□ -1.52
CYCSP39-201ENST00000565821 GPCPD1Q9NPB8 672 aa5.58□□□□□ -1.52
CYCSP39-201ENST00000565821 KDM4FA0A1W2PPD8 638 aa5.57□□□□□ -1.52
CYCSP39-201ENST00000565821 MS4A1P11836 297 aa5.57□□□□□ -1.52
CYCSP39-201ENST00000565821 PPP4R3BQ5MIZ7 849 aa5.57□□□□□ -1.52
CYCSP39-201ENST00000565821 PCMTD1Q96MG8 357 aaPredicted RBP5.57□□□□□ -1.52
CYCSP39-201ENST00000565821 ADAM33Q9BZ11 813 aa5.57□□□□□ -1.52
CYCSP39-201ENST00000565821 SUPT5HO00267 1087 aaKnown RBP5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 POTEJP0CG39 1038 aa5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 HOXB3P14651 431 aaPredicted RBP5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 SSTR3P32745 418 aaPredicted RBP5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 PRSS12P56730 875 aa5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 METTL3Q86U44 580 aaKnown RBP5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 REPIN1Q9BWE0 567 aaKnown RBP5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 LHX6Q9UPM6 363 aa5.56□□□□□ -1.52
CYCSP39-201ENST00000565821 MROH2BQ7Z745 1585 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 PSDA5PKW4 1024 aaPredicted RBP5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 POTEB2H3BUK9 544 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 SNPHO15079 494 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 GPR153Q6NV75 609 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 RBM46Q8TBY0 533 aaKnown RBP5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 NLRP7Q8WX94 980 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 CDCA7LQ96GN5 454 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 PHOX2BQ99453 314 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 RSPH6AQ9H0K4 717 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 ATAD2BQ9ULI0 1458 aa5.55□□□□□ -1.52
CYCSP39-201ENST00000565821 PXYLP1Q8TE99 480 aa5.54□□□□□ -1.52
CYCSP39-201ENST00000565821 BEGAINQ9BUH8 593 aa5.54□□□□□ -1.52
CYCSP39-201ENST00000565821 PCDH10Q9P2E7 1040 aa5.54□□□□□ -1.52
CYCSP39-201ENST00000565821 RBM27Q9P2N5 1060 aaKnown RBP5.54□□□□□ -1.52
CYCSP39-201ENST00000565821 ADGRG1Q9Y653 693 aa5.54□□□□□ -1.52
CYCSP39-201ENST00000565821 PTPREP23469 700 aa5.53□□□□□ -1.52
CYCSP39-201ENST00000565821 GOPCQ9HD26 462 aa5.53□□□□□ -1.52
CYCSP39-201ENST00000565821 NESP48681 1621 aa5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 SMARCA4P51532 1647 aa5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 KCNH8Q96L42 1107 aa5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 TMUB1Q9BVT8 246 aa5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 ZMYND15Q9H091 742 aa5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 FAM217BQ9NTX9 383 aaPredicted RBP5.52□□□□□ -1.53
CYCSP39-201ENST00000565821 NCAPD3P42695 1498 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 COL9A1P20849 921 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 FLIIQ13045 1269 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 SH3D19Q5HYK7 790 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 PACS2Q86VP3 889 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 BCL2L12Q9HB09 334 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 POLR3EQ9NVU0 708 aa5.51□□□□□ -1.53
CYCSP39-201ENST00000565821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 NBPF26B4DH59 902 aa5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 PPP1R3GB7ZBB8 358 aa5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 SKIV2LQ15477 1246 aaKnown RBP5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 NUDT18Q6ZVK8 323 aa5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 TTC13Q8NBP0 860 aa5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 PNMA3Q9UL41 463 aa5.5□□□□□ -1.53
CYCSP39-201ENST00000565821 RCCD1A6NED2 376 aa5.49□□□□□ -1.53
CYCSP39-201ENST00000565821 HOXB1P14653 301 aaPredicted RBP5.49□□□□□ -1.53
CYCSP39-201ENST00000565821 ARXQ96QS3 562 aa5.49□□□□□ -1.53
CYCSP39-201ENST00000565821 KCNK17Q96T54 332 aa5.49□□□□□ -1.53
CYCSP39-201ENST00000565821 DDX11L8A8MPP1 907 aa5.48□□□□□ -1.53
CYCSP39-201ENST00000565821 DIXDC1Q155Q3 683 aa5.48□□□□□ -1.53
CYCSP39-201ENST00000565821 SULF1Q8IWU6 871 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms