RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
IFT140-206ENST00000565298 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
IFT140-206ENST00000565298 MCCP23508 829 aa24.23■■□□□ 1.47
IFT140-206ENST00000565298 PDE3BQ13370 1112 aa24.22■■□□□ 1.47
IFT140-206ENST00000565298 NCOA2Q15596 1464 aa24.22■■□□□ 1.47
IFT140-206ENST00000565298 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
IFT140-206ENST00000565298 USP47Q96K76 1375 aa24.21■■□□□ 1.47
IFT140-206ENST00000565298 KIF21BO75037 1637 aa24.21■■□□□ 1.47
IFT140-206ENST00000565298 EVA1CP58658 441 aa24.2■■□□□ 1.46
IFT140-206ENST00000565298 B4GALNT3Q6L9W6 998 aa24.2■■□□□ 1.46
IFT140-206ENST00000565298 SMC4Q9NTJ3 1288 aa24.2■■□□□ 1.46
IFT140-206ENST00000565298 ITPRIPQ8IWB1 547 aa24.19■■□□□ 1.46
IFT140-206ENST00000565298 RWDD1Q9H446 243 aaPredicted RBP24.19■■□□□ 1.46
IFT140-206ENST00000565298 PSME1Q06323 249 aa24.19■■□□□ 1.46
IFT140-206ENST00000565298 NAP1L2Q9ULW6 460 aaPredicted RBP24.18■■□□□ 1.46
IFT140-206ENST00000565298 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
IFT140-206ENST00000565298 MYBBP1AQ9BQG0 1328 aaKnown RBP24.18■■□□□ 1.46
IFT140-206ENST00000565298 DNMBPQ6XZF7 1577 aa24.18■■□□□ 1.46
IFT140-206ENST00000565298 PLEKHH2Q8IVE3 1493 aa24.17■■□□□ 1.46
IFT140-206ENST00000565298 EFCAB5A4FU69 1503 aa24.17■■□□□ 1.46
IFT140-206ENST00000565298 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
IFT140-206ENST00000565298 HMMRO75330 724 aa24.17■■□□□ 1.46
IFT140-206ENST00000565298 ATF3P18847 181 aa24.16■■□□□ 1.46
IFT140-206ENST00000565298 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
IFT140-206ENST00000565298 TAF7LQ5H9L4 462 aa24.15■■□□□ 1.46
IFT140-206ENST00000565298 ERICH6BQ5W0A0 696 aa24.15■■□□□ 1.46
IFT140-206ENST00000565298 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
IFT140-206ENST00000565298 APBB1O00213 710 aa24.14■■□□□ 1.45
IFT140-206ENST00000565298 KIAA1211Q6ZU35 1233 aa24.14■■□□□ 1.45
IFT140-206ENST00000565298 CCDC146Q8IYE0 955 aa24.13■■□□□ 1.45
IFT140-206ENST00000565298 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
IFT140-206ENST00000565298 GORABQ5T7V8 394 aa24.12■■□□□ 1.45
IFT140-206ENST00000565298 GTF2E1P29083 439 aaPredicted RBP24.12■■□□□ 1.45
IFT140-206ENST00000565298 TEFQ10587 303 aa24.12■■□□□ 1.45
IFT140-206ENST00000565298 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
IFT140-206ENST00000565298 TROQ12816 1431 aaPredicted RBP24.11■■□□□ 1.45
IFT140-206ENST00000565298 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
IFT140-206ENST00000565298 CHMP3Q9Y3E7 222 aa24.1■■□□□ 1.45
IFT140-206ENST00000565298 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
IFT140-206ENST00000565298 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
IFT140-206ENST00000565298 SLC4A10Q6U841 1118 aa24.08■■□□□ 1.45
IFT140-206ENST00000565298 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
IFT140-206ENST00000565298 PMFBP1Q8TBY8 1022 aa24.07■■□□□ 1.44
IFT140-206ENST00000565298 TXNDC2Q86VQ3 553 aa24.07■■□□□ 1.44
IFT140-206ENST00000565298 THEMISQ8N1K5 641 aaPredicted RBP24.07■■□□□ 1.44
IFT140-206ENST00000565298 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
IFT140-206ENST00000565298 GPATCH3Q96I76 525 aa24.06■■□□□ 1.44
IFT140-206ENST00000565298 HSCBQ8IWL3 235 aa24.06■■□□□ 1.44
IFT140-206ENST00000565298 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
IFT140-206ENST00000565298 SCAPERQ9BY12 1400 aa24.04■■□□□ 1.44
IFT140-206ENST00000565298 NGEFQ8N5V2 710 aa24.04■■□□□ 1.44
IFT140-206ENST00000565298 ISY1Q9ULR0 285 aaKnown RBP24.04■■□□□ 1.44
IFT140-206ENST00000565298 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
IFT140-206ENST00000565298 SLC52A1Q9NWF4 448 aa24.04■■□□□ 1.44
IFT140-206ENST00000565298 TRIM44Q96DX7 344 aaPredicted RBP24.03■■□□□ 1.44
IFT140-206ENST00000565298 RRBP1Q9P2E9 1410 aaKnown RBP24.03■■□□□ 1.44
IFT140-206ENST00000565298 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
IFT140-206ENST00000565298 BICRAQ9NZM4 1560 aa24.02■■□□□ 1.44
IFT140-206ENST00000565298 GOLGA6L4A6NEF3 574 aa24.02■■□□□ 1.44
IFT140-206ENST00000565298 TTC5Q8N0Z6 440 aa24.01■■□□□ 1.43
IFT140-206ENST00000565298 POGZQ7Z3K3 1410 aa24■■□□□ 1.43
IFT140-206ENST00000565298 CLUAP1Q96AJ1 413 aa24■■□□□ 1.43
IFT140-206ENST00000565298 HFM1A2PYH4 1435 aa24■■□□□ 1.43
IFT140-206ENST00000565298 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
IFT140-206ENST00000565298 RRP7AQ9Y3A4 280 aaKnown RBP23.99■■□□□ 1.43
IFT140-206ENST00000565298 G3V3G9 751 aa23.99■■□□□ 1.43
IFT140-206ENST00000565298 DCAF8Q5TAQ9 597 aa23.99■■□□□ 1.43
IFT140-206ENST00000565298 C9orf84Q5VXU9 1444 aa23.98■■□□□ 1.43
IFT140-206ENST00000565298 TPRNQ4KMQ1 711 aa23.98■■□□□ 1.43
IFT140-206ENST00000565298 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
IFT140-206ENST00000565298 MEX3CQ5U5Q3 659 aaKnown RBP23.97■■□□□ 1.43
IFT140-206ENST00000565298 RAPGEF3O95398 923 aa23.97■■□□□ 1.43
IFT140-206ENST00000565298 PROSER2Q86WR7 435 aaPredicted RBP23.96■■□□□ 1.43
IFT140-206ENST00000565298 E9PSI1 815 aa23.96■■□□□ 1.43
IFT140-206ENST00000565298 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
IFT140-206ENST00000565298 PTMAP06454 111 aaKnown RBP23.95■■□□□ 1.42
IFT140-206ENST00000565298 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
IFT140-206ENST00000565298 TULP1O00294 542 aaPredicted RBP23.93■■□□□ 1.42
IFT140-206ENST00000565298 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
IFT140-206ENST00000565298 GPRASP1Q5JY77 1395 aa23.93■■□□□ 1.42
IFT140-206ENST00000565298 CFAP70Q5T0N1 1121 aa23.92■■□□□ 1.42
IFT140-206ENST00000565298 ELL2O00472 640 aaPredicted RBP23.92■■□□□ 1.42
IFT140-206ENST00000565298 HECW1Q76N89 1606 aa23.92■■□□□ 1.42
IFT140-206ENST00000565298 NLRP6P59044 892 aa23.91■■□□□ 1.42
IFT140-206ENST00000565298 FRAT2O75474 233 aaPredicted RBP23.91■■□□□ 1.42
IFT140-206ENST00000565298 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.41
IFT140-206ENST00000565298 GNL2Q13823 731 aaKnown RBP23.89■■□□□ 1.41
IFT140-206ENST00000565298 APAF1O14727 1248 aa23.88■■□□□ 1.41
IFT140-206ENST00000565298 TRIM6-TRIM34B2RNG4 842 aa23.88■■□□□ 1.41
IFT140-206ENST00000565298 TCERG1O14776 1098 aaKnown RBP23.88■■□□□ 1.41
IFT140-206ENST00000565298 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
IFT140-206ENST00000565298 CABP2Q9NPB3 220 aa23.87■■□□□ 1.41
IFT140-206ENST00000565298 NLRP2Q9NX02 1062 aa23.86■■□□□ 1.41
IFT140-206ENST00000565298 ZKSCAN2Q63HK3 967 aa23.86■■□□□ 1.41
IFT140-206ENST00000565298 SYTL4Q96C24 671 aaPredicted RBP23.85■■□□□ 1.41
IFT140-206ENST00000565298 GGNBP2Q9H3C7 697 aa23.84■■□□□ 1.41
IFT140-206ENST00000565298 MSH5O43196 834 aa23.84■■□□□ 1.41
IFT140-206ENST00000565298 NRDCO43847 1150 aa23.84■■□□□ 1.41
IFT140-206ENST00000565298 DDX58O95786 925 aaKnown RBP23.84■■□□□ 1.41
IFT140-206ENST00000565298 RIPK4P57078 832 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms