RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 AGLP35573 1532 aa18.56■□□□□ 0.56
NSMCE1-208ENST00000565070 RNF17Q9BXT8 1623 aaKnown RBP18.52■□□□□ 0.56
NSMCE1-208ENST00000565070 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
NSMCE1-208ENST00000565070 UNC13BO14795 1591 aa18.52■□□□□ 0.55
NSMCE1-208ENST00000565070 KIF3BO15066 747 aa18.51■□□□□ 0.55
NSMCE1-208ENST00000565070 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
NSMCE1-208ENST00000565070 KANK1Q14678 1352 aa18.48■□□□□ 0.55
NSMCE1-208ENST00000565070 KDM5DQ9BY66 1539 aa18.47■□□□□ 0.55
NSMCE1-208ENST00000565070 SIGLEC1Q9BZZ2 1709 aa18.47■□□□□ 0.55
NSMCE1-208ENST00000565070 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
NSMCE1-208ENST00000565070 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
NSMCE1-208ENST00000565070 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
NSMCE1-208ENST00000565070 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
NSMCE1-208ENST00000565070 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
NSMCE1-208ENST00000565070 NUP155O75694 1391 aa18.44■□□□□ 0.54
NSMCE1-208ENST00000565070 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
NSMCE1-208ENST00000565070 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
NSMCE1-208ENST00000565070 GGT6Q6P531 493 aa18.43■□□□□ 0.54
NSMCE1-208ENST00000565070 ZC3H13Q5T200 1668 aaKnown RBP18.43■□□□□ 0.54
NSMCE1-208ENST00000565070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.42■□□□□ 0.54
NSMCE1-208ENST00000565070 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
NSMCE1-208ENST00000565070 LMTK2Q8IWU2 1503 aa18.39■□□□□ 0.53
NSMCE1-208ENST00000565070 TET3O43151 1660 aa18.38■□□□□ 0.53
NSMCE1-208ENST00000565070 PZPP20742 1482 aa18.38■□□□□ 0.53
NSMCE1-208ENST00000565070 CEP152O94986 1710 aa18.38■□□□□ 0.53
NSMCE1-208ENST00000565070 ABCC3O15438 1527 aa18.37■□□□□ 0.53
NSMCE1-208ENST00000565070 WASHC2CQ9Y4E1 1318 aa18.37■□□□□ 0.53
NSMCE1-208ENST00000565070 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
NSMCE1-208ENST00000565070 MLECQ14165 292 aa18.36■□□□□ 0.53
NSMCE1-208ENST00000565070 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
NSMCE1-208ENST00000565070 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
NSMCE1-208ENST00000565070 CNTLNQ9NXG0 1405 aa18.36■□□□□ 0.53
NSMCE1-208ENST00000565070 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
NSMCE1-208ENST00000565070 FER1L4A9Z1Z3 1794 aa18.34■□□□□ 0.53
NSMCE1-208ENST00000565070 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
NSMCE1-208ENST00000565070 CLTCQ00610 1675 aaKnown RBP18.33■□□□□ 0.52
NSMCE1-208ENST00000565070 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
NSMCE1-208ENST00000565070 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
NSMCE1-208ENST00000565070 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
NSMCE1-208ENST00000565070 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
NSMCE1-208ENST00000565070 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
NSMCE1-208ENST00000565070 ARHGAP31Q2M1Z3 1444 aa18.3■□□□□ 0.52
NSMCE1-208ENST00000565070 PKD2Q13563 968 aa18.3■□□□□ 0.52
NSMCE1-208ENST00000565070 E9PCH4 1651 aa18.3■□□□□ 0.52
NSMCE1-208ENST00000565070 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
NSMCE1-208ENST00000565070 MADDQ8WXG6 1647 aa18.27■□□□□ 0.52
NSMCE1-208ENST00000565070 NPATQ14207 1427 aa18.25■□□□□ 0.51
NSMCE1-208ENST00000565070 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
NSMCE1-208ENST00000565070 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
NSMCE1-208ENST00000565070 SPHKAPQ2M3C7 1700 aa18.23■□□□□ 0.51
NSMCE1-208ENST00000565070 FOXD1Q16676 465 aa18.23■□□□□ 0.51
NSMCE1-208ENST00000565070 ANKRD30BQ9BXX2 1392 aa18.22■□□□□ 0.51
NSMCE1-208ENST00000565070 PREX1Q8TCU6 1659 aa18.21■□□□□ 0.51
NSMCE1-208ENST00000565070 C3P01024 1663 aa18.21■□□□□ 0.51
NSMCE1-208ENST00000565070 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
NSMCE1-208ENST00000565070 PTPRTO14522 1441 aa18.2■□□□□ 0.5
NSMCE1-208ENST00000565070 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
NSMCE1-208ENST00000565070 TRPM2O94759 1503 aa18.2■□□□□ 0.5
NSMCE1-208ENST00000565070 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
NSMCE1-208ENST00000565070 SPATA31D1Q6ZQQ2 1576 aa18.18■□□□□ 0.5
NSMCE1-208ENST00000565070 NOS1P29475 1434 aa18.18■□□□□ 0.5
NSMCE1-208ENST00000565070 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
NSMCE1-208ENST00000565070 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
NSMCE1-208ENST00000565070 PTPRMP28827 1452 aa18.14■□□□□ 0.49
NSMCE1-208ENST00000565070 SYNMO15061 1565 aa18.13■□□□□ 0.49
NSMCE1-208ENST00000565070 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
NSMCE1-208ENST00000565070 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
NSMCE1-208ENST00000565070 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
NSMCE1-208ENST00000565070 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
NSMCE1-208ENST00000565070 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
NSMCE1-208ENST00000565070 TNRQ92752 1358 aa18.12■□□□□ 0.49
NSMCE1-208ENST00000565070 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
NSMCE1-208ENST00000565070 CEBPAP49715 358 aaPredicted RBP18.1■□□□□ 0.49
NSMCE1-208ENST00000565070 KIF1BO60333 1816 aa18.1■□□□□ 0.49
NSMCE1-208ENST00000565070 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
NSMCE1-208ENST00000565070 KDM4FA0A1W2PPD8 638 aa18.08■□□□□ 0.49
NSMCE1-208ENST00000565070 NLRP1Q9C000 1473 aa18.08■□□□□ 0.48
NSMCE1-208ENST00000565070 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
NSMCE1-208ENST00000565070 UGGT1Q9NYU2 1555 aa18.07■□□□□ 0.48
NSMCE1-208ENST00000565070 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
NSMCE1-208ENST00000565070 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
NSMCE1-208ENST00000565070 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
NSMCE1-208ENST00000565070 IDI1Q13907 227 aa18.04■□□□□ 0.48
NSMCE1-208ENST00000565070 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
NSMCE1-208ENST00000565070 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.47
NSMCE1-208ENST00000565070 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
NSMCE1-208ENST00000565070 ZNF142P52746 1687 aaPredicted RBP18.01■□□□□ 0.47
NSMCE1-208ENST00000565070 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
NSMCE1-208ENST00000565070 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
NSMCE1-208ENST00000565070 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
NSMCE1-208ENST00000565070 CEP170BQ9Y4F5 1589 aaPredicted RBP17.99■□□□□ 0.47
NSMCE1-208ENST00000565070 UBR1Q8IWV7 1749 aa17.99■□□□□ 0.47
NSMCE1-208ENST00000565070 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
NSMCE1-208ENST00000565070 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
NSMCE1-208ENST00000565070 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
NSMCE1-208ENST00000565070 MIER1Q8N108 512 aa17.97■□□□□ 0.47
NSMCE1-208ENST00000565070 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.47
NSMCE1-208ENST00000565070 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
NSMCE1-208ENST00000565070 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
NSMCE1-208ENST00000565070 ZNF326Q5BKZ1 582 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms