RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
NSMCE1-208ENST00000565070 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
NSMCE1-208ENST00000565070 ABCC9O60706 1549 aa24.78■■□□□ 1.56
NSMCE1-208ENST00000565070 ZCCHC6Q5VYS8 1495 aaKnown RBP24.53■■□□□ 1.52
NSMCE1-208ENST00000565070 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.48
NSMCE1-208ENST00000565070 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
NSMCE1-208ENST00000565070 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
NSMCE1-208ENST00000565070 NACADO15069 1562 aa24.23■■□□□ 1.47
NSMCE1-208ENST00000565070 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
NSMCE1-208ENST00000565070 SCRIBQ14160 1630 aa23.61■■□□□ 1.37
NSMCE1-208ENST00000565070 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
NSMCE1-208ENST00000565070 SHROOM4Q9ULL8 1493 aa23.39■■□□□ 1.33
NSMCE1-208ENST00000565070 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
NSMCE1-208ENST00000565070 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
NSMCE1-208ENST00000565070 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
NSMCE1-208ENST00000565070 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
NSMCE1-208ENST00000565070 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
NSMCE1-208ENST00000565070 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
NSMCE1-208ENST00000565070 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
NSMCE1-208ENST00000565070 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
NSMCE1-208ENST00000565070 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
NSMCE1-208ENST00000565070 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
NSMCE1-208ENST00000565070 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
NSMCE1-208ENST00000565070 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
NSMCE1-208ENST00000565070 WIZO95785 1651 aa22.37■■□□□ 1.17
NSMCE1-208ENST00000565070 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
NSMCE1-208ENST00000565070 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
NSMCE1-208ENST00000565070 HMGXB3Q12766 1538 aa22.28■■□□□ 1.16
NSMCE1-208ENST00000565070 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
NSMCE1-208ENST00000565070 DNAJC5BQ9UF47 199 aa22.22■■□□□ 1.15
NSMCE1-208ENST00000565070 TOP2AP11388 1531 aaKnown RBP22.2■■□□□ 1.14
NSMCE1-208ENST00000565070 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
NSMCE1-208ENST00000565070 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
NSMCE1-208ENST00000565070 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
NSMCE1-208ENST00000565070 CFTRP13569 1480 aa21.67■■□□□ 1.06
NSMCE1-208ENST00000565070 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
NSMCE1-208ENST00000565070 NESP48681 1621 aa21.58■■□□□ 1.04
NSMCE1-208ENST00000565070 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
NSMCE1-208ENST00000565070 FANCD2Q9BXW9 1451 aa21.44■■□□□ 1.02
NSMCE1-208ENST00000565070 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
NSMCE1-208ENST00000565070 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
NSMCE1-208ENST00000565070 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
NSMCE1-208ENST00000565070 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
NSMCE1-208ENST00000565070 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
NSMCE1-208ENST00000565070 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
NSMCE1-208ENST00000565070 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
NSMCE1-208ENST00000565070 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
NSMCE1-208ENST00000565070 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
NSMCE1-208ENST00000565070 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
NSMCE1-208ENST00000565070 WDR62O43379 1518 aa21.16■□□□□ 0.98
NSMCE1-208ENST00000565070 CUX1P39880 1505 aa21.16■□□□□ 0.98
NSMCE1-208ENST00000565070 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
NSMCE1-208ENST00000565070 TOP2BQ02880 1626 aa21.14■□□□□ 0.98
NSMCE1-208ENST00000565070 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.98
NSMCE1-208ENST00000565070 SYNJ1O43426 1573 aa21.13■□□□□ 0.97
NSMCE1-208ENST00000565070 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
NSMCE1-208ENST00000565070 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
NSMCE1-208ENST00000565070 POLA1P09884 1462 aaPredicted RBP21■□□□□ 0.95
NSMCE1-208ENST00000565070 CUX2O14529 1486 aa20.98■□□□□ 0.95
NSMCE1-208ENST00000565070 SOGA1O94964 1423 aa20.92■□□□□ 0.94
NSMCE1-208ENST00000565070 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
NSMCE1-208ENST00000565070 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
NSMCE1-208ENST00000565070 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
NSMCE1-208ENST00000565070 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
NSMCE1-208ENST00000565070 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
NSMCE1-208ENST00000565070 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
NSMCE1-208ENST00000565070 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
NSMCE1-208ENST00000565070 EEA1Q15075 1411 aa20.74■□□□□ 0.91
NSMCE1-208ENST00000565070 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
NSMCE1-208ENST00000565070 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
NSMCE1-208ENST00000565070 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
NSMCE1-208ENST00000565070 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
NSMCE1-208ENST00000565070 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.9
NSMCE1-208ENST00000565070 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
NSMCE1-208ENST00000565070 GRIN2BQ13224 1484 aa20.64■□□□□ 0.9
NSMCE1-208ENST00000565070 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.89
NSMCE1-208ENST00000565070 RUSC2Q8N2Y8 1516 aa20.64■□□□□ 0.89
NSMCE1-208ENST00000565070 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
NSMCE1-208ENST00000565070 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
NSMCE1-208ENST00000565070 CUL7Q14999 1698 aa20.57■□□□□ 0.88
NSMCE1-208ENST00000565070 IGF1RP08069 1367 aa20.57■□□□□ 0.88
NSMCE1-208ENST00000565070 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
NSMCE1-208ENST00000565070 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
NSMCE1-208ENST00000565070 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
NSMCE1-208ENST00000565070 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
NSMCE1-208ENST00000565070 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
NSMCE1-208ENST00000565070 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
NSMCE1-208ENST00000565070 PRXQ9BXM0 1461 aa20.46■□□□□ 0.87
NSMCE1-208ENST00000565070 KIF21BO75037 1637 aa20.46■□□□□ 0.87
NSMCE1-208ENST00000565070 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
NSMCE1-208ENST00000565070 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
NSMCE1-208ENST00000565070 CHMP7Q8WUX9 453 aaPredicted RBP20.39■□□□□ 0.85
NSMCE1-208ENST00000565070 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
NSMCE1-208ENST00000565070 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
NSMCE1-208ENST00000565070 CHD1O14646 1710 aa20.37■□□□□ 0.85
NSMCE1-208ENST00000565070 FBLN2P98095 1184 aa20.34■□□□□ 0.85
NSMCE1-208ENST00000565070 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
NSMCE1-208ENST00000565070 NUP160Q12769 1436 aa20.25■□□□□ 0.83
NSMCE1-208ENST00000565070 CTTNBP2Q8WZ74 1663 aa20.25■□□□□ 0.83
NSMCE1-208ENST00000565070 UBTFP17480 764 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms