RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
PKM-212ENST00000564440 PRDM15P57071 1507 aaPredicted RBP13.43□□□□□ -0.26
PKM-212ENST00000564440 ABCC5O15440 1437 aa13.43□□□□□ -0.26
PKM-212ENST00000564440 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
PKM-212ENST00000564440 TRIM52Q96A61 297 aa13.42□□□□□ -0.26
PKM-212ENST00000564440 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
PKM-212ENST00000564440 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
PKM-212ENST00000564440 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
PKM-212ENST00000564440 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
PKM-212ENST00000564440 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
PKM-212ENST00000564440 KDM5AP29375 1690 aaKnown RBP13.39□□□□□ -0.27
PKM-212ENST00000564440 A2MP01023 1474 aa13.37□□□□□ -0.27
PKM-212ENST00000564440 MIER1Q8N108 512 aa13.37□□□□□ -0.27
PKM-212ENST00000564440 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
PKM-212ENST00000564440 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
PKM-212ENST00000564440 IQGAP3Q86VI3 1631 aa13.36□□□□□ -0.27
PKM-212ENST00000564440 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
PKM-212ENST00000564440 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
PKM-212ENST00000564440 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
PKM-212ENST00000564440 NCOA1Q15788 1441 aa13.34□□□□□ -0.27
PKM-212ENST00000564440 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.28
PKM-212ENST00000564440 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
PKM-212ENST00000564440 TET3O43151 1660 aa13.31□□□□□ -0.28
PKM-212ENST00000564440 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
PKM-212ENST00000564440 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
PKM-212ENST00000564440 C3P01024 1663 aa13.31□□□□□ -0.28
PKM-212ENST00000564440 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
PKM-212ENST00000564440 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
PKM-212ENST00000564440 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
PKM-212ENST00000564440 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
PKM-212ENST00000564440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
PKM-212ENST00000564440 SETD5Q9C0A6 1442 aa13.27□□□□□ -0.28
PKM-212ENST00000564440 SPAG9O60271 1321 aaKnown RBP13.27□□□□□ -0.29
PKM-212ENST00000564440 ABCC3O15438 1527 aa13.27□□□□□ -0.29
PKM-212ENST00000564440 NPATQ14207 1427 aa13.27□□□□□ -0.29
PKM-212ENST00000564440 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
PKM-212ENST00000564440 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
PKM-212ENST00000564440 SPATA31D1Q6ZQQ2 1576 aa13.26□□□□□ -0.29
PKM-212ENST00000564440 RPRD2Q5VT52 1461 aaKnown RBP13.26□□□□□ -0.29
PKM-212ENST00000564440 ANKRD30AQ9BXX3 1397 aa13.26□□□□□ -0.29
PKM-212ENST00000564440 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
PKM-212ENST00000564440 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
PKM-212ENST00000564440 CEP152O94986 1710 aa13.25□□□□□ -0.29
PKM-212ENST00000564440 PIK3C2BO00750 1634 aa13.25□□□□□ -0.29
PKM-212ENST00000564440 EFCAB6Q5THR3 1501 aa13.25□□□□□ -0.29
PKM-212ENST00000564440 RAPGEF3O95398 923 aa13.24□□□□□ -0.29
PKM-212ENST00000564440 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
PKM-212ENST00000564440 AFAP1Q8N556 730 aa13.22□□□□□ -0.29
PKM-212ENST00000564440 SETD1BQ9UPS6 1966 aaKnown RBP13.22□□□□□ -0.29
PKM-212ENST00000564440 PZPP20742 1482 aa13.22□□□□□ -0.29
PKM-212ENST00000564440 NAIPQ13075 1403 aa13.22□□□□□ -0.29
PKM-212ENST00000564440 KIF15Q9NS87 1388 aa13.21□□□□□ -0.29
PKM-212ENST00000564440 E9PCH4 1651 aa13.19□□□□□ -0.3
PKM-212ENST00000564440 PTPRMP28827 1452 aa13.19□□□□□ -0.3
PKM-212ENST00000564440 MYO3AQ8NEV4 1616 aa13.19□□□□□ -0.3
PKM-212ENST00000564440 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
PKM-212ENST00000564440 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
PKM-212ENST00000564440 SPHKAPQ2M3C7 1700 aa13.17□□□□□ -0.3
PKM-212ENST00000564440 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
PKM-212ENST00000564440 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
PKM-212ENST00000564440 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
PKM-212ENST00000564440 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
PKM-212ENST00000564440 NOS1P29475 1434 aa13.14□□□□□ -0.31
PKM-212ENST00000564440 PTPRTO14522 1441 aa13.13□□□□□ -0.31
PKM-212ENST00000564440 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
PKM-212ENST00000564440 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
PKM-212ENST00000564440 SYNMO15061 1565 aa13.12□□□□□ -0.31
PKM-212ENST00000564440 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
PKM-212ENST00000564440 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
PKM-212ENST00000564440 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
PKM-212ENST00000564440 TRPM2O94759 1503 aa13.11□□□□□ -0.31
PKM-212ENST00000564440 ERVK-7P63135 1459 aa13.11□□□□□ -0.31
PKM-212ENST00000564440 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
PKM-212ENST00000564440 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
PKM-212ENST00000564440 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
PKM-212ENST00000564440 PKD2Q13563 968 aa13.1□□□□□ -0.31
PKM-212ENST00000564440 PLA2R1Q13018 1463 aa13.09□□□□□ -0.31
PKM-212ENST00000564440 POLR1AO95602 1720 aaPredicted RBP13.09□□□□□ -0.31
PKM-212ENST00000564440 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
PKM-212ENST00000564440 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
PKM-212ENST00000564440 SLIT1O75093 1534 aa13.07□□□□□ -0.32
PKM-212ENST00000564440 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
PKM-212ENST00000564440 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
PKM-212ENST00000564440 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
PKM-212ENST00000564440 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
PKM-212ENST00000564440 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
PKM-212ENST00000564440 LMTK3Q96Q04 1460 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 ARHGAP23Q9P227 1491 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 NUP155O75694 1391 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
PKM-212ENST00000564440 KANK1Q14678 1352 aa13.04□□□□□ -0.32
PKM-212ENST00000564440 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
PKM-212ENST00000564440 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
PKM-212ENST00000564440 KIF1BO60333 1816 aa13.03□□□□□ -0.32
PKM-212ENST00000564440 MED14O60244 1454 aa13.02□□□□□ -0.33
PKM-212ENST00000564440 GGT6Q6P531 493 aa13□□□□□ -0.33
PKM-212ENST00000564440 TSHZ2Q9NRE2 1034 aa13□□□□□ -0.33
PKM-212ENST00000564440 CLTCL1P53675 1640 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms