RNA–Protein interactions for RNA: ENST00000564209.5

POLR3E-209, Transcript of RNA polymerase III subunit E, humanhuman

TSL 2 BASIC

Gene POLR3E, Length 2,464 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-209ENST00000564209 ZBED9Q6R2W3 1325 aa25.49■■□□□ 1.67
POLR3E-209ENST00000564209 EFCAB2Q5VUJ9 269 aa25.49■■□□□ 1.67
POLR3E-209ENST00000564209 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
POLR3E-209ENST00000564209 DHX29Q7Z478 1369 aaKnown RBP25.48■■□□□ 1.67
POLR3E-209ENST00000564209 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
POLR3E-209ENST00000564209 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
POLR3E-209ENST00000564209 UHRF1BP1Q6BDS2 1440 aa25.44■■□□□ 1.66
POLR3E-209ENST00000564209 UNC13BO14795 1591 aa25.43■■□□□ 1.66
POLR3E-209ENST00000564209 RGL3Q3MIN7 710 aa25.42■■□□□ 1.66
POLR3E-209ENST00000564209 CARD11Q9BXL7 1154 aa25.42■■□□□ 1.66
POLR3E-209ENST00000564209 KDM5CP41229 1560 aa25.42■■□□□ 1.66
POLR3E-209ENST00000564209 ABCC1P33527 1531 aa25.42■■□□□ 1.66
POLR3E-209ENST00000564209 RALGAPBQ86X10 1494 aa25.41■■□□□ 1.66
POLR3E-209ENST00000564209 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
POLR3E-209ENST00000564209 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
POLR3E-209ENST00000564209 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
POLR3E-209ENST00000564209 SENP3-EIF4A1A0A087X0R7 540 aa25.4■■□□□ 1.66
POLR3E-209ENST00000564209 MSH5O43196 834 aa25.4■■□□□ 1.66
POLR3E-209ENST00000564209 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.66
POLR3E-209ENST00000564209 DUOX2Q9NRD8 1548 aa25.39■■□□□ 1.65
POLR3E-209ENST00000564209 ERICH6BQ5W0A0 696 aa25.38■■□□□ 1.65
POLR3E-209ENST00000564209 B4GALNT3Q6L9W6 998 aa25.38■■□□□ 1.65
POLR3E-209ENST00000564209 IQGAP3Q86VI3 1631 aa25.34■■□□□ 1.65
POLR3E-209ENST00000564209 WDR7Q9Y4E6 1490 aa25.34■■□□□ 1.65
POLR3E-209ENST00000564209 SPAG9O60271 1321 aaKnown RBP25.34■■□□□ 1.65
POLR3E-209ENST00000564209 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.65
POLR3E-209ENST00000564209 ERBINQ96RT1 1412 aa25.32■■□□□ 1.64
POLR3E-209ENST00000564209 ROCK2O75116 1388 aaKnown RBP25.3■■□□□ 1.64
POLR3E-209ENST00000564209 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
POLR3E-209ENST00000564209 NBPF1Q3BBV0 1214 aa25.28■■□□□ 1.64
POLR3E-209ENST00000564209 A2MP01023 1474 aa25.27■■□□□ 1.64
POLR3E-209ENST00000564209 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
POLR3E-209ENST00000564209 ARID4BQ4LE39 1312 aaPredicted RBP25.26■■□□□ 1.63
POLR3E-209ENST00000564209 FANCAO15360 1455 aa25.26■■□□□ 1.63
POLR3E-209ENST00000564209 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
POLR3E-209ENST00000564209 PNISRQ8TF01 805 aaKnown RBP25.25■■□□□ 1.63
POLR3E-209ENST00000564209 ASXL2Q76L83 1435 aa25.24■■□□□ 1.63
POLR3E-209ENST00000564209 SMG6Q86US8 1419 aaKnown RBP25.24■■□□□ 1.63
POLR3E-209ENST00000564209 MYT1LQ9UL68 1186 aa25.23■■□□□ 1.63
POLR3E-209ENST00000564209 FANCIQ9NVI1 1328 aa25.23■■□□□ 1.63
POLR3E-209ENST00000564209 ARAP3Q8WWN8 1544 aa25.23■■□□□ 1.63
POLR3E-209ENST00000564209 TRPM1Q7Z4N2 1603 aa25.22■■□□□ 1.63
POLR3E-209ENST00000564209 NUDCQ9Y266 331 aa25.21■■□□□ 1.63
POLR3E-209ENST00000564209 ABCA9Q8IUA7 1624 aa25.2■■□□□ 1.62
POLR3E-209ENST00000564209 TMC1Q8TDI8 760 aa25.2■■□□□ 1.62
POLR3E-209ENST00000564209 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
POLR3E-209ENST00000564209 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
POLR3E-209ENST00000564209 SCAPERQ9BY12 1400 aa25.18■■□□□ 1.62
POLR3E-209ENST00000564209 ADGRL1O94910 1474 aa25.17■■□□□ 1.62
POLR3E-209ENST00000564209 ATP10AO60312 1499 aa25.16■■□□□ 1.62
POLR3E-209ENST00000564209 ATP7AQ04656 1500 aa25.15■■□□□ 1.62
POLR3E-209ENST00000564209 E9PCH4 1651 aa25.15■■□□□ 1.62
POLR3E-209ENST00000564209 KIF3BO15066 747 aa25.13■■□□□ 1.61
POLR3E-209ENST00000564209 RNF123Q5XPI4 1314 aa25.13■■□□□ 1.61
POLR3E-209ENST00000564209 INO80Q9ULG1 1556 aaPredicted RBP25.12■■□□□ 1.61
POLR3E-209ENST00000564209 NPM1P06748 294 aaKnown RBP eCLIP25.09■■□□□ 1.61
POLR3E-209ENST00000564209 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
POLR3E-209ENST00000564209 LRPPRCP42704 1394 aaKnown RBP25.08■■□□□ 1.61
POLR3E-209ENST00000564209 MYBBP1AQ9BQG0 1328 aaKnown RBP25.08■■□□□ 1.61
POLR3E-209ENST00000564209 DEPDC5O75140 1603 aa25.07■■□□□ 1.6
POLR3E-209ENST00000564209 BRD4O60885 1362 aaPredicted RBP25.05■■□□□ 1.6
POLR3E-209ENST00000564209 RALBP1Q15311 655 aa25.04■■□□□ 1.6
POLR3E-209ENST00000564209 PRDM15P57071 1507 aaPredicted RBP25.04■■□□□ 1.6
POLR3E-209ENST00000564209 TESK2Q96S53 571 aa25.04■■□□□ 1.6
POLR3E-209ENST00000564209 TRPM2O94759 1503 aa25.03■■□□□ 1.6
POLR3E-209ENST00000564209 DISP3Q9P2K9 1392 aa25.03■■□□□ 1.6
POLR3E-209ENST00000564209 SPHKAPQ2M3C7 1700 aa25.02■■□□□ 1.6
POLR3E-209ENST00000564209 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
POLR3E-209ENST00000564209 SALL2Q9Y467 1007 aaPredicted RBP25.02■■□□□ 1.6
POLR3E-209ENST00000564209 CLTCL1P53675 1640 aa25.02■■□□□ 1.6
POLR3E-209ENST00000564209 KANK1Q14678 1352 aa25.01■■□□□ 1.59
POLR3E-209ENST00000564209 EIF2AK4Q9P2K8 1649 aaKnown RBP25.01■■□□□ 1.59
POLR3E-209ENST00000564209 PTPRTO14522 1441 aa25.01■■□□□ 1.59
POLR3E-209ENST00000564209 TET3O43151 1660 aa25■■□□□ 1.59
POLR3E-209ENST00000564209 KIDINS220Q9ULH0 1771 aa24.99■■□□□ 1.59
POLR3E-209ENST00000564209 PER1O15534 1290 aaPredicted RBP24.98■■□□□ 1.59
POLR3E-209ENST00000564209 LAMC1P11047 1609 aa24.98■■□□□ 1.59
POLR3E-209ENST00000564209 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
POLR3E-209ENST00000564209 VWDEQ8N2E2 1590 aa24.98■■□□□ 1.59
POLR3E-209ENST00000564209 CD109Q6YHK3 1445 aa24.98■■□□□ 1.59
POLR3E-209ENST00000564209 ERICH6Q7L0X2 663 aa24.97■■□□□ 1.59
POLR3E-209ENST00000564209 KTN1Q86UP2 1357 aaKnown RBP24.97■■□□□ 1.59
POLR3E-209ENST00000564209 COL17A1Q9UMD9 1497 aaPredicted RBP24.97■■□□□ 1.59
POLR3E-209ENST00000564209 UGGT1Q9NYU2 1555 aa24.96■■□□□ 1.59
POLR3E-209ENST00000564209 CEP152O94986 1710 aa24.96■■□□□ 1.59
POLR3E-209ENST00000564209 MADDQ8WXG6 1647 aa24.96■■□□□ 1.59
POLR3E-209ENST00000564209 PARD3Q8TEW0 1356 aa24.95■■□□□ 1.59
POLR3E-209ENST00000564209 RNF17Q9BXT8 1623 aaKnown RBP24.94■■□□□ 1.58
POLR3E-209ENST00000564209 NLRP13Q86W25 1043 aa24.94■■□□□ 1.58
POLR3E-209ENST00000564209 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
POLR3E-209ENST00000564209 CC2D1BQ5T0F9 858 aaKnown RBP24.92■■□□□ 1.58
POLR3E-209ENST00000564209 TMF1P82094 1093 aa24.9■■□□□ 1.58
POLR3E-209ENST00000564209 PANK3Q9H999 370 aa24.89■■□□□ 1.58
POLR3E-209ENST00000564209 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
POLR3E-209ENST00000564209 POGZQ7Z3K3 1410 aa24.88■■□□□ 1.57
POLR3E-209ENST00000564209 CDCA7LQ96GN5 454 aa24.87■■□□□ 1.57
POLR3E-209ENST00000564209 GGT6Q6P531 493 aa24.87■■□□□ 1.57
POLR3E-209ENST00000564209 EXOC6Q8TAG9 804 aa24.86■■□□□ 1.57
POLR3E-209ENST00000564209 PPRC1Q5VV67 1664 aaKnown RBP24.86■■□□□ 1.57
POLR3E-209ENST00000564209 RAPGEF3O95398 923 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms