RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HCSTQ9UBK5 93 aa8.23□□□□□ -1.09
SHCBP1-202ENST00000563219 ARIH1Q9Y4X5 557 aaPredicted RBP8.22□□□□□ -1.09
SHCBP1-202ENST00000563219 SPDYE16A6NNV3 312 aaPredicted RBP8.21□□□□□ -1.1
SHCBP1-202ENST00000563219 PPP1R3GB7ZBB8 358 aa8.21□□□□□ -1.1
SHCBP1-202ENST00000563219 PDIA6Q15084 440 aa8.21□□□□□ -1.1
SHCBP1-202ENST00000563219 COL9A1P20849 921 aa8.2□□□□□ -1.1
SHCBP1-202ENST00000563219 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
SHCBP1-202ENST00000563219 DDX12PQ92771 950 aa8.2□□□□□ -1.1
SHCBP1-202ENST00000563219 KCTD12Q96CX2 325 aaKnown RBP8.19□□□□□ -1.1
SHCBP1-202ENST00000563219 MRPL50Q8N5N7 158 aaKnown RBP8.18□□□□□ -1.1
SHCBP1-202ENST00000563219 TSHZ2Q9NRE2 1034 aa8.18□□□□□ -1.1
SHCBP1-202ENST00000563219 NBPF3Q9H094 633 aa8.17□□□□□ -1.1
SHCBP1-202ENST00000563219 RABGEF1Q9UJ41 708 aa8.17□□□□□ -1.1
SHCBP1-202ENST00000563219 PROX2Q3B8N5 592 aa8.16□□□□□ -1.1
SHCBP1-202ENST00000563219 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
SHCBP1-202ENST00000563219 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
SHCBP1-202ENST00000563219 ONECUT3O60422 494 aaPredicted RBP8.15□□□□□ -1.1
SHCBP1-202ENST00000563219 NBR1Q14596 966 aa8.15□□□□□ -1.1
SHCBP1-202ENST00000563219 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
SHCBP1-202ENST00000563219 WNT2BQ93097 391 aa8.13□□□□□ -1.11
SHCBP1-202ENST00000563219 HAP1P54257 671 aaPredicted RBP8.12□□□□□ -1.11
SHCBP1-202ENST00000563219 PTPN5P54829 565 aa8.12□□□□□ -1.11
SHCBP1-202ENST00000563219 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
SHCBP1-202ENST00000563219 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
SHCBP1-202ENST00000563219 KIAA1468Q9P260 1216 aa8.12□□□□□ -1.11
SHCBP1-202ENST00000563219 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
SHCBP1-202ENST00000563219 MAP3K7O43318 606 aa8.11□□□□□ -1.11
SHCBP1-202ENST00000563219 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
SHCBP1-202ENST00000563219 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
SHCBP1-202ENST00000563219 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
SHCBP1-202ENST00000563219 OSBPP22059 807 aa8.09□□□□□ -1.11
SHCBP1-202ENST00000563219 PRIM1P49642 420 aaKnown RBP8.09□□□□□ -1.11
SHCBP1-202ENST00000563219 ARHGEF1Q92888 912 aaKnown RBP8.08□□□□□ -1.12
SHCBP1-202ENST00000563219 CERKQ8TCT0 537 aa8.07□□□□□ -1.12
SHCBP1-202ENST00000563219 PACS2Q86VP3 889 aa8.06□□□□□ -1.12
SHCBP1-202ENST00000563219 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
SHCBP1-202ENST00000563219 ANKK1Q8NFD2 765 aa8.06□□□□□ -1.12
SHCBP1-202ENST00000563219 ZFRQ96KR1 1074 aaKnown RBP8.06□□□□□ -1.12
SHCBP1-202ENST00000563219 TSKSQ9UJT2 592 aa8.06□□□□□ -1.12
SHCBP1-202ENST00000563219 KCNV2Q8TDN2 545 aa8.05□□□□□ -1.12
SHCBP1-202ENST00000563219 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
SHCBP1-202ENST00000563219 PRSS12P56730 875 aa8.04□□□□□ -1.12
SHCBP1-202ENST00000563219 FAM98CQ17RN3 349 aaKnown RBP8.04□□□□□ -1.12
SHCBP1-202ENST00000563219 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
SHCBP1-202ENST00000563219 SOWAHBA6NEL2 793 aa8.03□□□□□ -1.12
SHCBP1-202ENST00000563219 BCAMP50895 628 aa8.02□□□□□ -1.13
SHCBP1-202ENST00000563219 FAM198AQ9UFP1 575 aa8.01□□□□□ -1.13
SHCBP1-202ENST00000563219 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
SHCBP1-202ENST00000563219 IFFO2Q5TF58 517 aa8□□□□□ -1.13
SHCBP1-202ENST00000563219 CDHR5Q9HBB8 845 aa8□□□□□ -1.13
SHCBP1-202ENST00000563219 NPDC1Q9NQX5 325 aaPredicted RBP8□□□□□ -1.13
SHCBP1-202ENST00000563219 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
SHCBP1-202ENST00000563219 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
SHCBP1-202ENST00000563219 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
SHCBP1-202ENST00000563219 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
SHCBP1-202ENST00000563219 TATDN2Q93075 761 aa7.98□□□□□ -1.13
SHCBP1-202ENST00000563219 WBP1LQ9NX94 342 aa7.98□□□□□ -1.13
SHCBP1-202ENST00000563219 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.98□□□□□ -1.13
SHCBP1-202ENST00000563219 C3orf80F5H4A9 247 aa7.97□□□□□ -1.13
SHCBP1-202ENST00000563219 SMAPO00193 183 aa7.97□□□□□ -1.13
SHCBP1-202ENST00000563219 TTC13Q8NBP0 860 aa7.97□□□□□ -1.13
SHCBP1-202ENST00000563219 LRCH3Q96II8 777 aa7.97□□□□□ -1.13
SHCBP1-202ENST00000563219 TSR3Q9UJK0 312 aaKnown RBP7.97□□□□□ -1.13
SHCBP1-202ENST00000563219 NBPF26B4DH59 902 aa7.96□□□□□ -1.14
SHCBP1-202ENST00000563219 PNMA3Q9UL41 463 aa7.96□□□□□ -1.14
SHCBP1-202ENST00000563219 NUDT18Q6ZVK8 323 aa7.95□□□□□ -1.14
SHCBP1-202ENST00000563219 ITGBL1O95965 494 aaPredicted RBP7.94□□□□□ -1.14
SHCBP1-202ENST00000563219 HPS5Q9UPZ3 1129 aa7.94□□□□□ -1.14
SHCBP1-202ENST00000563219 SEMA3EO15041 775 aa7.93□□□□□ -1.14
SHCBP1-202ENST00000563219 PADI6Q6TGC4 694 aa7.93□□□□□ -1.14
SHCBP1-202ENST00000563219 SAMD7Q7Z3H4 446 aa7.93□□□□□ -1.14
SHCBP1-202ENST00000563219 PPP4CP60510 307 aa7.92□□□□□ -1.14
SHCBP1-202ENST00000563219 HDGFP51858 240 aaKnown RBP7.91□□□□□ -1.14
SHCBP1-202ENST00000563219 PTGDRQ13258 359 aa7.91□□□□□ -1.14
SHCBP1-202ENST00000563219 A0A0G2JS52 829 aa7.89□□□□□ -1.15
SHCBP1-202ENST00000563219 EYA1Q99502 592 aa7.89□□□□□ -1.15
SHCBP1-202ENST00000563219 NUTM2FA1L443 756 aa7.88□□□□□ -1.15
SHCBP1-202ENST00000563219 RGS20O76081 388 aa7.88□□□□□ -1.15
SHCBP1-202ENST00000563219 KCNC4Q03721 635 aa7.88□□□□□ -1.15
SHCBP1-202ENST00000563219 TESPA1A2RU30 521 aaPredicted RBP7.86□□□□□ -1.15
SHCBP1-202ENST00000563219 SWT1Q5T5J6 900 aaKnown RBP7.85□□□□□ -1.15
SHCBP1-202ENST00000563219 FCHSD2O94868 740 aa7.84□□□□□ -1.15
SHCBP1-202ENST00000563219 SMYD5Q6GMV2 418 aa7.84□□□□□ -1.15
SHCBP1-202ENST00000563219 RNF40O75150 1001 aa7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 TJAP1Q5JTD0 557 aa7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 SLF2Q8IX21 1173 aa7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 NECTIN2Q92692 538 aa7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 ADGRG1Q9Y653 693 aa7.83□□□□□ -1.16
SHCBP1-202ENST00000563219 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
SHCBP1-202ENST00000563219 APLP1P51693 650 aa7.81□□□□□ -1.16
SHCBP1-202ENST00000563219 DNAJB2P25686 324 aa7.8□□□□□ -1.16
SHCBP1-202ENST00000563219 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
SHCBP1-202ENST00000563219 BCANQ96GW7 911 aa7.8□□□□□ -1.16
SHCBP1-202ENST00000563219 MTRQ99707 1265 aa7.8□□□□□ -1.16
SHCBP1-202ENST00000563219 IL21Q9HBE4 155 aa7.8□□□□□ -1.16
SHCBP1-202ENST00000563219 HIC1Q14526 733 aa7.79□□□□□ -1.16
SHCBP1-202ENST00000563219 FAM161AQ3B820 660 aa7.79□□□□□ -1.16
SHCBP1-202ENST00000563219 TMEM134Q9H6X4 195 aa7.79□□□□□ -1.16
SHCBP1-202ENST00000563219 RCCD1A6NED2 376 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 353.9 ms