RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
CNOT1-204ENST00000563130 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
CNOT1-204ENST00000563130 AGLP35573 1532 aa9.58□□□□□ -0.88
CNOT1-204ENST00000563130 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
CNOT1-204ENST00000563130 BCORL1Q5H9F3 1711 aa9.57□□□□□ -0.88
CNOT1-204ENST00000563130 ADAMTSL3P82987 1691 aa9.57□□□□□ -0.88
CNOT1-204ENST00000563130 MAST1Q9Y2H9 1570 aa9.56□□□□□ -0.88
CNOT1-204ENST00000563130 ARID4BQ4LE39 1312 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-204ENST00000563130 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
CNOT1-204ENST00000563130 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
CNOT1-204ENST00000563130 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
CNOT1-204ENST00000563130 PLXNC1O60486 1568 aa9.56□□□□□ -0.88
CNOT1-204ENST00000563130 ABCC5O15440 1437 aa9.56□□□□□ -0.88
CNOT1-204ENST00000563130 A2MP01023 1474 aa9.55□□□□□ -0.88
CNOT1-204ENST00000563130 SHANK2Q9UPX8 1470 aa9.55□□□□□ -0.88
CNOT1-204ENST00000563130 DAPK1P53355 1430 aa9.55□□□□□ -0.88
CNOT1-204ENST00000563130 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
CNOT1-204ENST00000563130 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
CNOT1-204ENST00000563130 ADGBQ8N7X0 1667 aa9.53□□□□□ -0.88
CNOT1-204ENST00000563130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.53□□□□□ -0.88
CNOT1-204ENST00000563130 CROCC2H7BZ55 1655 aa9.53□□□□□ -0.88
CNOT1-204ENST00000563130 MADDQ8WXG6 1647 aa9.52□□□□□ -0.88
CNOT1-204ENST00000563130 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
CNOT1-204ENST00000563130 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
CNOT1-204ENST00000563130 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
CNOT1-204ENST00000563130 RRBP1Q9P2E9 1410 aaKnown RBP9.52□□□□□ -0.89
CNOT1-204ENST00000563130 PTPRMP28827 1452 aa9.51□□□□□ -0.89
CNOT1-204ENST00000563130 MLECQ14165 292 aa9.51□□□□□ -0.89
CNOT1-204ENST00000563130 FAM50AQ14320 339 aaKnown RBP9.51□□□□□ -0.89
CNOT1-204ENST00000563130 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
CNOT1-204ENST00000563130 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
CNOT1-204ENST00000563130 ADGRL2O95490 1459 aa9.5□□□□□ -0.89
CNOT1-204ENST00000563130 KIF15Q9NS87 1388 aa9.48□□□□□ -0.89
CNOT1-204ENST00000563130 DUOX2Q9NRD8 1548 aa9.48□□□□□ -0.89
CNOT1-204ENST00000563130 FER1L4A9Z1Z3 1794 aa9.48□□□□□ -0.89
CNOT1-204ENST00000563130 RIMS1Q86UR5 1692 aaKnown RBP9.48□□□□□ -0.89
CNOT1-204ENST00000563130 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
CNOT1-204ENST00000563130 KIF3BO15066 747 aa9.47□□□□□ -0.89
CNOT1-204ENST00000563130 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
CNOT1-204ENST00000563130 CHIC2Q9UKJ5 165 aa9.47□□□□□ -0.89
CNOT1-204ENST00000563130 ERBINQ96RT1 1412 aa9.47□□□□□ -0.89
CNOT1-204ENST00000563130 GGT6Q6P531 493 aa9.47□□□□□ -0.89
CNOT1-204ENST00000563130 RRP7BPQ9NSQ0 103 aa9.47□□□□□ -0.89
CNOT1-204ENST00000563130 EIF2AK4Q9P2K8 1649 aaKnown RBP9.46□□□□□ -0.89
CNOT1-204ENST00000563130 CNTLNQ9NXG0 1405 aa9.46□□□□□ -0.89
CNOT1-204ENST00000563130 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
CNOT1-204ENST00000563130 ROCK1Q13464 1354 aa9.46□□□□□ -0.9
CNOT1-204ENST00000563130 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
CNOT1-204ENST00000563130 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
CNOT1-204ENST00000563130 AKT1S1Q96B36 256 aa9.44□□□□□ -0.9
CNOT1-204ENST00000563130 MROH1Q8NDA8 1641 aa9.44□□□□□ -0.9
CNOT1-204ENST00000563130 MROH2AA6NES4 1674 aa9.43□□□□□ -0.9
CNOT1-204ENST00000563130 CEBPAP49715 358 aaPredicted RBP9.43□□□□□ -0.9
CNOT1-204ENST00000563130 ZMYM3Q14202 1370 aa9.43□□□□□ -0.9
CNOT1-204ENST00000563130 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
CNOT1-204ENST00000563130 ANKRD50Q9ULJ7 1429 aa9.43□□□□□ -0.9
CNOT1-204ENST00000563130 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
CNOT1-204ENST00000563130 KDM5DQ9BY66 1539 aa9.42□□□□□ -0.9
CNOT1-204ENST00000563130 C3P01024 1663 aa9.42□□□□□ -0.9
CNOT1-204ENST00000563130 DEPDC5O75140 1603 aa9.42□□□□□ -0.9
CNOT1-204ENST00000563130 PRDM15P57071 1507 aaPredicted RBP9.42□□□□□ -0.9
CNOT1-204ENST00000563130 ITGAEP38570 1179 aa9.42□□□□□ -0.9
CNOT1-204ENST00000563130 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
CNOT1-204ENST00000563130 WASHC2CQ9Y4E1 1318 aa9.41□□□□□ -0.9
CNOT1-204ENST00000563130 FKBP8Q14318 412 aa9.4□□□□□ -0.9
CNOT1-204ENST00000563130 ABCC3O15438 1527 aa9.4□□□□□ -0.9
CNOT1-204ENST00000563130 NPATQ14207 1427 aa9.4□□□□□ -0.91
CNOT1-204ENST00000563130 VWDEQ8N2E2 1590 aa9.4□□□□□ -0.91
CNOT1-204ENST00000563130 ZC3H13Q5T200 1668 aaKnown RBP9.39□□□□□ -0.91
CNOT1-204ENST00000563130 LMTK3Q96Q04 1460 aa9.39□□□□□ -0.91
CNOT1-204ENST00000563130 PZPP20742 1482 aa9.39□□□□□ -0.91
CNOT1-204ENST00000563130 NAIPQ13075 1403 aa9.38□□□□□ -0.91
CNOT1-204ENST00000563130 SETD1BQ9UPS6 1966 aaKnown RBP9.38□□□□□ -0.91
CNOT1-204ENST00000563130 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
CNOT1-204ENST00000563130 HFM1A2PYH4 1435 aa9.37□□□□□ -0.91
CNOT1-204ENST00000563130 ARHGAP31Q2M1Z3 1444 aa9.37□□□□□ -0.91
CNOT1-204ENST00000563130 UNC13BO14795 1591 aa9.36□□□□□ -0.91
CNOT1-204ENST00000563130 PREX1Q8TCU6 1659 aa9.36□□□□□ -0.91
CNOT1-204ENST00000563130 KANK1Q14678 1352 aa9.36□□□□□ -0.91
CNOT1-204ENST00000563130 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
CNOT1-204ENST00000563130 CEP152O94986 1710 aa9.35□□□□□ -0.91
CNOT1-204ENST00000563130 CAMSAP1Q5T5Y3 1602 aa9.35□□□□□ -0.91
CNOT1-204ENST00000563130 UHRF1BP1Q6BDS2 1440 aa9.35□□□□□ -0.91
CNOT1-204ENST00000563130 GCC2Q8IWJ2 1684 aa9.35□□□□□ -0.91
CNOT1-204ENST00000563130 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
CNOT1-204ENST00000563130 ERVK-7P63135 1459 aa9.33□□□□□ -0.92
CNOT1-204ENST00000563130 EFCAB6Q5THR3 1501 aa9.33□□□□□ -0.92
CNOT1-204ENST00000563130 TNRQ92752 1358 aa9.33□□□□□ -0.92
CNOT1-204ENST00000563130 REM2Q8IYK8 340 aaPredicted RBP9.33□□□□□ -0.92
CNOT1-204ENST00000563130 IQGAP3Q86VI3 1631 aa9.32□□□□□ -0.92
CNOT1-204ENST00000563130 MYO3AQ8NEV4 1616 aa9.32□□□□□ -0.92
CNOT1-204ENST00000563130 HSPA2P54652 639 aa9.32□□□□□ -0.92
CNOT1-204ENST00000563130 NUP155O75694 1391 aa9.32□□□□□ -0.92
CNOT1-204ENST00000563130 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
CNOT1-204ENST00000563130 TET3O43151 1660 aa9.31□□□□□ -0.92
CNOT1-204ENST00000563130 ZNF142P52746 1687 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-204ENST00000563130 NOS1P29475 1434 aa9.31□□□□□ -0.92
CNOT1-204ENST00000563130 A2ML1A8K2U0 1454 aa9.31□□□□□ -0.92
CNOT1-204ENST00000563130 NLRP1Q9C000 1473 aa9.31□□□□□ -0.92
CNOT1-204ENST00000563130 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms