RNA–Protein interactions for RNA: ENST00000561734.5

RPUSD1-202, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-202ENST00000561734 ARHGAP5Q13017 1502 aa27.54■■■□□ 2
RPUSD1-202ENST00000561734 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.53■■■□□ 2
RPUSD1-202ENST00000561734 MAST1Q9Y2H9 1570 aa27.52■■■□□ 2
RPUSD1-202ENST00000561734 CCDC144AA2RUR9 1427 aa27.52■■■□□ 2
RPUSD1-202ENST00000561734 UNC13BO14795 1591 aa27.51■■■□□ 2
RPUSD1-202ENST00000561734 SHROOM2Q13796 1616 aa27.5■■□□□ 1.99
RPUSD1-202ENST00000561734 PNISRQ8TF01 805 aaKnown RBP27.5■■□□□ 1.99
RPUSD1-202ENST00000561734 B4GALNT3Q6L9W6 998 aa27.5■■□□□ 1.99
RPUSD1-202ENST00000561734 PRAG1Q86YV5 1406 aa27.49■■□□□ 1.99
RPUSD1-202ENST00000561734 E9PCH4 1651 aa27.49■■□□□ 1.99
RPUSD1-202ENST00000561734 TRPM1Q7Z4N2 1603 aa27.49■■□□□ 1.99
RPUSD1-202ENST00000561734 TMC1Q8TDI8 760 aa27.48■■□□□ 1.99
RPUSD1-202ENST00000561734 NUDCQ9Y266 331 aa27.48■■□□□ 1.99
RPUSD1-202ENST00000561734 PLA2R1Q13018 1463 aa27.47■■□□□ 1.99
RPUSD1-202ENST00000561734 ERCC6L2Q5T890 1561 aa27.45■■□□□ 1.98
RPUSD1-202ENST00000561734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.45■■□□□ 1.98
RPUSD1-202ENST00000561734 PLXNC1O60486 1568 aa27.44■■□□□ 1.98
RPUSD1-202ENST00000561734 ABCC2Q92887 1545 aa27.44■■□□□ 1.98
RPUSD1-202ENST00000561734 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
RPUSD1-202ENST00000561734 SENP3-EIF4A1A0A087X0R7 540 aa27.43■■□□□ 1.98
RPUSD1-202ENST00000561734 RGL3Q3MIN7 710 aa27.43■■□□□ 1.98
RPUSD1-202ENST00000561734 MYBBP1AQ9BQG0 1328 aaKnown RBP27.42■■□□□ 1.98
RPUSD1-202ENST00000561734 A2MP01023 1474 aa27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 PLEKHH2Q8IVE3 1493 aa27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 KTN1Q86UP2 1357 aaKnown RBP27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 BRD4O60885 1362 aaPredicted RBP27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 MSH5O43196 834 aa27.41■■□□□ 1.98
RPUSD1-202ENST00000561734 FANCIQ9NVI1 1328 aa27.4■■□□□ 1.98
RPUSD1-202ENST00000561734 LRPPRCP42704 1394 aaKnown RBP27.4■■□□□ 1.98
RPUSD1-202ENST00000561734 RALBP1Q15311 655 aa27.4■■□□□ 1.98
RPUSD1-202ENST00000561734 NBPF1Q3BBV0 1214 aa27.39■■□□□ 1.98
RPUSD1-202ENST00000561734 RNF123Q5XPI4 1314 aa27.39■■□□□ 1.97
RPUSD1-202ENST00000561734 GPRASP1Q5JY77 1395 aa27.37■■□□□ 1.97
RPUSD1-202ENST00000561734 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
RPUSD1-202ENST00000561734 MAGI2Q86UL8 1455 aa27.33■■□□□ 1.97
RPUSD1-202ENST00000561734 LAMC1P11047 1609 aa27.33■■□□□ 1.96
RPUSD1-202ENST00000561734 PRDM15P57071 1507 aaPredicted RBP27.32■■□□□ 1.96
RPUSD1-202ENST00000561734 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
RPUSD1-202ENST00000561734 PARD3Q8TEW0 1356 aa27.3■■□□□ 1.96
RPUSD1-202ENST00000561734 COL17A1Q9UMD9 1497 aaPredicted RBP27.3■■□□□ 1.96
RPUSD1-202ENST00000561734 ATP10AO60312 1499 aa27.29■■□□□ 1.96
RPUSD1-202ENST00000561734 PLCH2O75038 1416 aa27.28■■□□□ 1.96
RPUSD1-202ENST00000561734 EIF2AK4Q9P2K8 1649 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-202ENST00000561734 ZCCHC11Q5TAX3 1644 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-202ENST00000561734 DISP3Q9P2K9 1392 aa27.27■■□□□ 1.96
RPUSD1-202ENST00000561734 NLRP13Q86W25 1043 aa27.26■■□□□ 1.96
RPUSD1-202ENST00000561734 PER1O15534 1290 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-202ENST00000561734 TESK2Q96S53 571 aa27.26■■□□□ 1.95
RPUSD1-202ENST00000561734 ABCC1P33527 1531 aa27.24■■□□□ 1.95
RPUSD1-202ENST00000561734 EFCAB2Q5VUJ9 269 aa27.22■■□□□ 1.95
RPUSD1-202ENST00000561734 TRAPPC8Q9Y2L5 1435 aa27.21■■□□□ 1.95
RPUSD1-202ENST00000561734 CCDC136Q96JN2 1154 aa27.2■■□□□ 1.94
RPUSD1-202ENST00000561734 RNF17Q9BXT8 1623 aaKnown RBP27.18■■□□□ 1.94
RPUSD1-202ENST00000561734 UHRF1BP1LA0JNW5 1464 aa27.18■■□□□ 1.94
RPUSD1-202ENST00000561734 CC2D1BQ5T0F9 858 aaKnown RBP27.16■■□□□ 1.94
RPUSD1-202ENST00000561734 CLASP1Q7Z460 1538 aa27.15■■□□□ 1.94
RPUSD1-202ENST00000561734 PANK3Q9H999 370 aa27.15■■□□□ 1.94
RPUSD1-202ENST00000561734 WASHC2CQ9Y4E1 1318 aa27.14■■□□□ 1.94
RPUSD1-202ENST00000561734 TMF1P82094 1093 aa27.14■■□□□ 1.94
RPUSD1-202ENST00000561734 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
RPUSD1-202ENST00000561734 RRP1P56182 461 aaKnown RBP27.11■■□□□ 1.93
RPUSD1-202ENST00000561734 ERICH6Q7L0X2 663 aa27.1■■□□□ 1.93
RPUSD1-202ENST00000561734 MADDQ8WXG6 1647 aa27.1■■□□□ 1.93
RPUSD1-202ENST00000561734 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
RPUSD1-202ENST00000561734 ZFYVE16Q7Z3T8 1539 aa27.08■■□□□ 1.93
RPUSD1-202ENST00000561734 RCAN3Q9UKA8 241 aa27.08■■□□□ 1.93
RPUSD1-202ENST00000561734 AFAP1Q8N556 730 aa27.07■■□□□ 1.92
RPUSD1-202ENST00000561734 TRPM2O94759 1503 aa27.07■■□□□ 1.92
RPUSD1-202ENST00000561734 PDE3BQ13370 1112 aa27.07■■□□□ 1.92
RPUSD1-202ENST00000561734 RTEL1-TNFRSF6BF6WH68 1400 aa27.06■■□□□ 1.92
RPUSD1-202ENST00000561734 BLMP54132 1417 aaPredicted RBP27.05■■□□□ 1.92
RPUSD1-202ENST00000561734 IQGAP1P46940 1657 aa27.04■■□□□ 1.92
RPUSD1-202ENST00000561734 ARAP3Q8WWN8 1544 aa27.03■■□□□ 1.92
RPUSD1-202ENST00000561734 INSRP06213 1382 aa27.02■■□□□ 1.92
RPUSD1-202ENST00000561734 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
RPUSD1-202ENST00000561734 CDCA7LQ96GN5 454 aa27.02■■□□□ 1.92
RPUSD1-202ENST00000561734 CEP152O94986 1710 aa27.02■■□□□ 1.92
RPUSD1-202ENST00000561734 SPHKAPQ2M3C7 1700 aa27.02■■□□□ 1.92
RPUSD1-202ENST00000561734 WDR7Q9Y4E6 1490 aa27.01■■□□□ 1.91
RPUSD1-202ENST00000561734 DEPDC5O75140 1603 aa27.01■■□□□ 1.91
RPUSD1-202ENST00000561734 CLTCL1P53675 1640 aa27.01■■□□□ 1.91
RPUSD1-202ENST00000561734 PTPRTO14522 1441 aa27.01■■□□□ 1.91
RPUSD1-202ENST00000561734 EXOC6Q8TAG9 804 aa27.01■■□□□ 1.91
RPUSD1-202ENST00000561734 TET3O43151 1660 aa26.96■■□□□ 1.91
RPUSD1-202ENST00000561734 SCAF11Q99590 1463 aaKnown RBP26.95■■□□□ 1.91
RPUSD1-202ENST00000561734 SCAPERQ9BY12 1400 aa26.94■■□□□ 1.9
RPUSD1-202ENST00000561734 ATP7AQ04656 1500 aa26.94■■□□□ 1.9
RPUSD1-202ENST00000561734 INO80Q9ULG1 1556 aaPredicted RBP26.94■■□□□ 1.9
RPUSD1-202ENST00000561734 ABCA9Q8IUA7 1624 aa26.92■■□□□ 1.9
RPUSD1-202ENST00000561734 KNSTRNQ9Y448 316 aa26.92■■□□□ 1.9
RPUSD1-202ENST00000561734 FANCAO15360 1455 aa26.92■■□□□ 1.9
RPUSD1-202ENST00000561734 SYNMO15061 1565 aa26.91■■□□□ 1.9
RPUSD1-202ENST00000561734 VWDEQ8N2E2 1590 aa26.91■■□□□ 1.9
RPUSD1-202ENST00000561734 STAC3Q96MF2 364 aa26.9■■□□□ 1.9
RPUSD1-202ENST00000561734 KANK1Q14678 1352 aa26.9■■□□□ 1.9
RPUSD1-202ENST00000561734 ADAMTS8Q9UP79 889 aa26.89■■□□□ 1.9
RPUSD1-202ENST00000561734 PPP2R1AP30153 589 aa26.88■■□□□ 1.89
RPUSD1-202ENST00000561734 AMER1Q5JTC6 1135 aaPredicted RBP26.88■■□□□ 1.89
RPUSD1-202ENST00000561734 CDCA8Q53HL2 280 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms