RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
CMTM4-203ENST00000561680 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
CMTM4-203ENST00000561680 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
CMTM4-203ENST00000561680 HRCP23327 699 aa18.91■□□□□ 0.62
CMTM4-203ENST00000561680 CEP152O94986 1710 aa18.91■□□□□ 0.62
CMTM4-203ENST00000561680 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
CMTM4-203ENST00000561680 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
CMTM4-203ENST00000561680 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
CMTM4-203ENST00000561680 TET3O43151 1660 aa18.85■□□□□ 0.61
CMTM4-203ENST00000561680 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
CMTM4-203ENST00000561680 PZPP20742 1482 aa18.83■□□□□ 0.6
CMTM4-203ENST00000561680 KIF3BO15066 747 aa18.82■□□□□ 0.6
CMTM4-203ENST00000561680 FER1L4A9Z1Z3 1794 aa18.82■□□□□ 0.6
CMTM4-203ENST00000561680 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
CMTM4-203ENST00000561680 CFAP65Q6ZU64 1925 aaKnown RBP18.8■□□□□ 0.6
CMTM4-203ENST00000561680 E9PCH4 1651 aa18.8■□□□□ 0.6
CMTM4-203ENST00000561680 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
CMTM4-203ENST00000561680 ABCC3O15438 1527 aa18.79■□□□□ 0.6
CMTM4-203ENST00000561680 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
CMTM4-203ENST00000561680 NUP155O75694 1391 aa18.78■□□□□ 0.6
CMTM4-203ENST00000561680 MROH2AA6NES4 1674 aa18.77■□□□□ 0.6
CMTM4-203ENST00000561680 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
CMTM4-203ENST00000561680 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
CMTM4-203ENST00000561680 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
CMTM4-203ENST00000561680 TRIM52Q96A61 297 aa18.76■□□□□ 0.59
CMTM4-203ENST00000561680 KANK1Q14678 1352 aa18.76■□□□□ 0.59
CMTM4-203ENST00000561680 SPHKAPQ2M3C7 1700 aa18.75■□□□□ 0.59
CMTM4-203ENST00000561680 ADAMTSL3P82987 1691 aa18.74■□□□□ 0.59
CMTM4-203ENST00000561680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.59
CMTM4-203ENST00000561680 GGT6Q6P531 493 aa18.72■□□□□ 0.59
CMTM4-203ENST00000561680 MADDQ8WXG6 1647 aa18.71■□□□□ 0.58
CMTM4-203ENST00000561680 ARID4BQ4LE39 1312 aaPredicted RBP18.7■□□□□ 0.58
CMTM4-203ENST00000561680 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CMTM4-203ENST00000561680 PREX1Q8TCU6 1659 aa18.69■□□□□ 0.58
CMTM4-203ENST00000561680 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
CMTM4-203ENST00000561680 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
CMTM4-203ENST00000561680 SLC4A1APQ9BWU0 796 aaKnown RBP18.68■□□□□ 0.58
CMTM4-203ENST00000561680 C3P01024 1663 aa18.68■□□□□ 0.58
CMTM4-203ENST00000561680 RPRD2Q5VT52 1461 aaKnown RBP18.67■□□□□ 0.58
CMTM4-203ENST00000561680 ARHGAP31Q2M1Z3 1444 aa18.66■□□□□ 0.58
CMTM4-203ENST00000561680 CNTLNQ9NXG0 1405 aa18.66■□□□□ 0.58
CMTM4-203ENST00000561680 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
CMTM4-203ENST00000561680 MLECQ14165 292 aa18.64■□□□□ 0.57
CMTM4-203ENST00000561680 NPATQ14207 1427 aa18.64■□□□□ 0.57
CMTM4-203ENST00000561680 PKD2Q13563 968 aa18.63■□□□□ 0.57
CMTM4-203ENST00000561680 TRPM2O94759 1503 aa18.62■□□□□ 0.57
CMTM4-203ENST00000561680 KIF1BO60333 1816 aa18.62■□□□□ 0.57
CMTM4-203ENST00000561680 CLSPNQ9HAW4 1339 aa18.61■□□□□ 0.57
CMTM4-203ENST00000561680 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
CMTM4-203ENST00000561680 PIK3C2BO00750 1634 aa18.6■□□□□ 0.57
CMTM4-203ENST00000561680 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
CMTM4-203ENST00000561680 SYNMO15061 1565 aa18.59■□□□□ 0.57
CMTM4-203ENST00000561680 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
CMTM4-203ENST00000561680 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
CMTM4-203ENST00000561680 PTPRTO14522 1441 aa18.58■□□□□ 0.57
CMTM4-203ENST00000561680 FOXD1Q16676 465 aa18.58■□□□□ 0.56
CMTM4-203ENST00000561680 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.56
CMTM4-203ENST00000561680 PLA2R1Q13018 1463 aa18.58■□□□□ 0.56
CMTM4-203ENST00000561680 ERVK-7P63135 1459 aa18.57■□□□□ 0.56
CMTM4-203ENST00000561680 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
CMTM4-203ENST00000561680 NOS1P29475 1434 aa18.56■□□□□ 0.56
CMTM4-203ENST00000561680 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
CMTM4-203ENST00000561680 ZMYM3Q14202 1370 aa18.55■□□□□ 0.56
CMTM4-203ENST00000561680 UGGT1Q9NYU2 1555 aa18.52■□□□□ 0.56
CMTM4-203ENST00000561680 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
CMTM4-203ENST00000561680 NEURL4Q96JN8 1562 aa18.5■□□□□ 0.55
CMTM4-203ENST00000561680 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
CMTM4-203ENST00000561680 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
CMTM4-203ENST00000561680 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
CMTM4-203ENST00000561680 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
CMTM4-203ENST00000561680 PTPRMP28827 1452 aa18.47■□□□□ 0.55
CMTM4-203ENST00000561680 ADGRB3O60242 1522 aa18.46■□□□□ 0.55
CMTM4-203ENST00000561680 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
CMTM4-203ENST00000561680 TMEM131LA2VDJ0 1609 aa18.45■□□□□ 0.54
CMTM4-203ENST00000561680 FBXO31Q5XUX0 539 aaPredicted RBP18.45■□□□□ 0.54
CMTM4-203ENST00000561680 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
CMTM4-203ENST00000561680 PPLO60437 1756 aa18.45■□□□□ 0.54
CMTM4-203ENST00000561680 TNRQ92752 1358 aa18.43■□□□□ 0.54
CMTM4-203ENST00000561680 SPATA31E1Q6ZUB1 1445 aa18.41■□□□□ 0.54
CMTM4-203ENST00000561680 NLRP1Q9C000 1473 aa18.41■□□□□ 0.54
CMTM4-203ENST00000561680 CEBPAP49715 358 aaPredicted RBP18.41■□□□□ 0.54
CMTM4-203ENST00000561680 KDM4FA0A1W2PPD8 638 aa18.39■□□□□ 0.53
CMTM4-203ENST00000561680 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
CMTM4-203ENST00000561680 SLC52A1Q9NWF4 448 aa18.39■□□□□ 0.53
CMTM4-203ENST00000561680 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
CMTM4-203ENST00000561680 TONSLQ96HA7 1378 aa18.36■□□□□ 0.53
CMTM4-203ENST00000561680 A2ML1A8K2U0 1454 aa18.35■□□□□ 0.53
CMTM4-203ENST00000561680 IDI1Q13907 227 aa18.35■□□□□ 0.53
CMTM4-203ENST00000561680 NEXMIFQ5QGS0 1516 aa18.34■□□□□ 0.53
CMTM4-203ENST00000561680 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
CMTM4-203ENST00000561680 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
CMTM4-203ENST00000561680 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
CMTM4-203ENST00000561680 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
CMTM4-203ENST00000561680 MYOM2P54296 1465 aa18.29■□□□□ 0.52
CMTM4-203ENST00000561680 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
CMTM4-203ENST00000561680 UHRF1BP1Q6BDS2 1440 aa18.28■□□□□ 0.52
CMTM4-203ENST00000561680 KIAA1210Q9ULL0 1709 aa18.28■□□□□ 0.52
CMTM4-203ENST00000561680 SLIT1O75093 1534 aa18.27■□□□□ 0.51
CMTM4-203ENST00000561680 TRPM1Q7Z4N2 1603 aa18.27■□□□□ 0.51
CMTM4-203ENST00000561680 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms