RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
CASC4-211ENST00000561305 DDX12PQ92771 950 aa10.5□□□□□ -0.73
CASC4-211ENST00000561305 BHMG1C9JSJ3 638 aaPredicted RBP10.49□□□□□ -0.73
CASC4-211ENST00000561305 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
CASC4-211ENST00000561305 COL9A1P20849 921 aa10.48□□□□□ -0.73
CASC4-211ENST00000561305 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
CASC4-211ENST00000561305 STAC3Q96MF2 364 aa10.46□□□□□ -0.73
CASC4-211ENST00000561305 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
CASC4-211ENST00000561305 NBR1Q14596 966 aa10.44□□□□□ -0.74
CASC4-211ENST00000561305 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
CASC4-211ENST00000561305 PROX2Q3B8N5 592 aa10.43□□□□□ -0.74
CASC4-211ENST00000561305 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
CASC4-211ENST00000561305 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
CASC4-211ENST00000561305 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
CASC4-211ENST00000561305 RABGEF1Q9UJ41 708 aa10.42□□□□□ -0.74
CASC4-211ENST00000561305 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
CASC4-211ENST00000561305 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
CASC4-211ENST00000561305 PRIM1P49642 420 aaKnown RBP10.4□□□□□ -0.74
CASC4-211ENST00000561305 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
CASC4-211ENST00000561305 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
CASC4-211ENST00000561305 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
CASC4-211ENST00000561305 MAP3K7O43318 606 aa10.39□□□□□ -0.75
CASC4-211ENST00000561305 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
CASC4-211ENST00000561305 OSBPP22059 807 aa10.38□□□□□ -0.75
CASC4-211ENST00000561305 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
CASC4-211ENST00000561305 KIAA1468Q9P260 1216 aa10.36□□□□□ -0.75
CASC4-211ENST00000561305 GOLGA8CPA6NN73 597 aa10.35□□□□□ -0.75
CASC4-211ENST00000561305 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
CASC4-211ENST00000561305 LAPTM4BQ86VI4 370 aa10.34□□□□□ -0.75
CASC4-211ENST00000561305 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
CASC4-211ENST00000561305 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
CASC4-211ENST00000561305 WNT2BQ93097 391 aa10.33□□□□□ -0.76
CASC4-211ENST00000561305 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
CASC4-211ENST00000561305 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
CASC4-211ENST00000561305 PTPN5P54829 565 aa10.29□□□□□ -0.76
CASC4-211ENST00000561305 PRSS12P56730 875 aa10.29□□□□□ -0.76
CASC4-211ENST00000561305 CDCA7LQ96GN5 454 aa10.29□□□□□ -0.76
CASC4-211ENST00000561305 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
CASC4-211ENST00000561305 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
CASC4-211ENST00000561305 PACS2Q86VP3 889 aa10.28□□□□□ -0.76
CASC4-211ENST00000561305 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
CASC4-211ENST00000561305 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
CASC4-211ENST00000561305 FAM98CQ17RN3 349 aaKnown RBP10.27□□□□□ -0.77
CASC4-211ENST00000561305 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
CASC4-211ENST00000561305 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
CASC4-211ENST00000561305 NPDC1Q9NQX5 325 aaPredicted RBP10.26□□□□□ -0.77
CASC4-211ENST00000561305 RBM27Q9P2N5 1060 aaKnown RBP10.26□□□□□ -0.77
CASC4-211ENST00000561305 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
CASC4-211ENST00000561305 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
CASC4-211ENST00000561305 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
CASC4-211ENST00000561305 SEMA3EO15041 775 aa10.22□□□□□ -0.77
CASC4-211ENST00000561305 BCAMP50895 628 aa10.22□□□□□ -0.77
CASC4-211ENST00000561305 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
CASC4-211ENST00000561305 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
CASC4-211ENST00000561305 TATDN2Q93075 761 aa10.21□□□□□ -0.77
CASC4-211ENST00000561305 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
CASC4-211ENST00000561305 SMAPO00193 183 aa10.19□□□□□ -0.78
CASC4-211ENST00000561305 PADI6Q6TGC4 694 aa10.18□□□□□ -0.78
CASC4-211ENST00000561305 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.18□□□□□ -0.78
CASC4-211ENST00000561305 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
CASC4-211ENST00000561305 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
CASC4-211ENST00000561305 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
CASC4-211ENST00000561305 PTGDRQ13258 359 aa10.16□□□□□ -0.78
CASC4-211ENST00000561305 IFFO2Q5TF58 517 aa10.16□□□□□ -0.78
CASC4-211ENST00000561305 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
CASC4-211ENST00000561305 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
CASC4-211ENST00000561305 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
CASC4-211ENST00000561305 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
CASC4-211ENST00000561305 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
CASC4-211ENST00000561305 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
CASC4-211ENST00000561305 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
CASC4-211ENST00000561305 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
CASC4-211ENST00000561305 EYA1Q99502 592 aa10.11□□□□□ -0.79
CASC4-211ENST00000561305 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
CASC4-211ENST00000561305 FCHSD2O94868 740 aa10.09□□□□□ -0.79
CASC4-211ENST00000561305 ITGBL1O95965 494 aaPredicted RBP10.09□□□□□ -0.79
CASC4-211ENST00000561305 PPP4CP60510 307 aa10.08□□□□□ -0.8
CASC4-211ENST00000561305 HDGFP51858 240 aaKnown RBP10.06□□□□□ -0.8
CASC4-211ENST00000561305 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
CASC4-211ENST00000561305 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
CASC4-211ENST00000561305 SWT1Q5T5J6 900 aaKnown RBP10.05□□□□□ -0.8
CASC4-211ENST00000561305 A0A0G2JS52 829 aa10.03□□□□□ -0.8
CASC4-211ENST00000561305 HIC1Q14526 733 aa10.03□□□□□ -0.8
CASC4-211ENST00000561305 RBM46Q8TBY0 533 aaKnown RBP10.03□□□□□ -0.8
CASC4-211ENST00000561305 GPR37O15354 613 aa10.02□□□□□ -0.81
CASC4-211ENST00000561305 DNAJB2P25686 324 aa10.01□□□□□ -0.81
CASC4-211ENST00000561305 KCNC4Q03721 635 aa10.01□□□□□ -0.81
CASC4-211ENST00000561305 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
CASC4-211ENST00000561305 FAM161AQ3B820 660 aa10□□□□□ -0.81
CASC4-211ENST00000561305 NECTIN2Q92692 538 aa10□□□□□ -0.81
CASC4-211ENST00000561305 RGS20O76081 388 aa9.99□□□□□ -0.81
CASC4-211ENST00000561305 RCCD1A6NED2 376 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 GNPATO15228 680 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 RNF40O75150 1001 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 APLP1P51693 650 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 TMEM134Q9H6X4 195 aa9.98□□□□□ -0.81
CASC4-211ENST00000561305 OATP04181 439 aa9.97□□□□□ -0.81
CASC4-211ENST00000561305 PXYLP1Q8TE99 480 aa9.97□□□□□ -0.81
CASC4-211ENST00000561305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms