RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ZMYM3Q14202 1370 aa15.84■□□□□ 0.13
TPM1-229ENST00000561242 NUP155O75694 1391 aa15.83■□□□□ 0.12
TPM1-229ENST00000561242 ADGRL2O95490 1459 aa15.83■□□□□ 0.12
TPM1-229ENST00000561242 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
TPM1-229ENST00000561242 PTPRMP28827 1452 aa15.79■□□□□ 0.12
TPM1-229ENST00000561242 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
TPM1-229ENST00000561242 PTPRKQ15262 1439 aa15.78■□□□□ 0.12
TPM1-229ENST00000561242 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.11
TPM1-229ENST00000561242 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.11
TPM1-229ENST00000561242 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
TPM1-229ENST00000561242 HDGFP51858 240 aaKnown RBP15.75■□□□□ 0.11
TPM1-229ENST00000561242 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
TPM1-229ENST00000561242 KDM5DQ9BY66 1539 aa15.73■□□□□ 0.11
TPM1-229ENST00000561242 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
TPM1-229ENST00000561242 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
TPM1-229ENST00000561242 NAIPQ13075 1403 aa15.72■□□□□ 0.11
TPM1-229ENST00000561242 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
TPM1-229ENST00000561242 THEMISQ8N1K5 641 aaPredicted RBP15.72■□□□□ 0.11
TPM1-229ENST00000561242 FAM135AQ9P2D6 1515 aa15.72■□□□□ 0.11
TPM1-229ENST00000561242 TNRQ92752 1358 aa15.72■□□□□ 0.11
TPM1-229ENST00000561242 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
TPM1-229ENST00000561242 EIF2AK4Q9P2K8 1649 aaKnown RBP15.72■□□□□ 0.11
TPM1-229ENST00000561242 HRCP23327 699 aa15.71■□□□□ 0.11
TPM1-229ENST00000561242 SLC52A1Q9NWF4 448 aa15.71■□□□□ 0.11
TPM1-229ENST00000561242 PKD2Q13563 968 aa15.7■□□□□ 0.1
TPM1-229ENST00000561242 BCANQ96GW7 911 aa15.7■□□□□ 0.1
TPM1-229ENST00000561242 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
TPM1-229ENST00000561242 ADAMTSL3P82987 1691 aa15.7■□□□□ 0.1
TPM1-229ENST00000561242 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
TPM1-229ENST00000561242 NPATQ14207 1427 aa15.69■□□□□ 0.1
TPM1-229ENST00000561242 EID1Q9Y6B2 187 aa15.69■□□□□ 0.1
TPM1-229ENST00000561242 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
TPM1-229ENST00000561242 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
TPM1-229ENST00000561242 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
TPM1-229ENST00000561242 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
TPM1-229ENST00000561242 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
TPM1-229ENST00000561242 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
TPM1-229ENST00000561242 PZPP20742 1482 aa15.65■□□□□ 0.1
TPM1-229ENST00000561242 ANKLE2Q86XL3 938 aa15.64■□□□□ 0.09
TPM1-229ENST00000561242 ABCC3O15438 1527 aa15.63■□□□□ 0.09
TPM1-229ENST00000561242 ARHGAP31Q2M1Z3 1444 aa15.63■□□□□ 0.09
TPM1-229ENST00000561242 HSPA2P54652 639 aa15.63■□□□□ 0.09
TPM1-229ENST00000561242 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
TPM1-229ENST00000561242 RNF17Q9BXT8 1623 aaKnown RBP15.61■□□□□ 0.09
TPM1-229ENST00000561242 PRDM15P57071 1507 aaPredicted RBP15.61■□□□□ 0.09
TPM1-229ENST00000561242 RPRD2Q5VT52 1461 aaKnown RBP15.6■□□□□ 0.09
TPM1-229ENST00000561242 IDI1Q13907 227 aa15.6■□□□□ 0.09
TPM1-229ENST00000561242 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.6■□□□□ 0.09
TPM1-229ENST00000561242 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
TPM1-229ENST00000561242 NLRP1Q9C000 1473 aa15.59■□□□□ 0.09
TPM1-229ENST00000561242 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.09
TPM1-229ENST00000561242 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
TPM1-229ENST00000561242 ERVK-7P63135 1459 aa15.57■□□□□ 0.08
TPM1-229ENST00000561242 MROH2AA6NES4 1674 aa15.57■□□□□ 0.08
TPM1-229ENST00000561242 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
TPM1-229ENST00000561242 FOXD1Q16676 465 aa15.56■□□□□ 0.08
TPM1-229ENST00000561242 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
TPM1-229ENST00000561242 GCC2Q8IWJ2 1684 aa15.53■□□□□ 0.08
TPM1-229ENST00000561242 UNC13BO14795 1591 aa15.53■□□□□ 0.08
TPM1-229ENST00000561242 CCDC144AA2RUR9 1427 aa15.52■□□□□ 0.08
TPM1-229ENST00000561242 NCKAP5LQ9HCH0 1330 aa15.52■□□□□ 0.08
TPM1-229ENST00000561242 C3P01024 1663 aa15.52■□□□□ 0.08
TPM1-229ENST00000561242 RGL3Q3MIN7 710 aa15.52■□□□□ 0.08
TPM1-229ENST00000561242 DEPDC5O75140 1603 aa15.52■□□□□ 0.08
TPM1-229ENST00000561242 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.07
TPM1-229ENST00000561242 CAMSAP1Q5T5Y3 1602 aa15.51■□□□□ 0.07
TPM1-229ENST00000561242 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
TPM1-229ENST00000561242 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
TPM1-229ENST00000561242 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
TPM1-229ENST00000561242 SETD1BQ9UPS6 1966 aaKnown RBP15.49■□□□□ 0.07
TPM1-229ENST00000561242 TET3O43151 1660 aa15.49■□□□□ 0.07
TPM1-229ENST00000561242 IQGAP3Q86VI3 1631 aa15.49■□□□□ 0.07
TPM1-229ENST00000561242 NOS1P29475 1434 aa15.49■□□□□ 0.07
TPM1-229ENST00000561242 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
TPM1-229ENST00000561242 CEP152O94986 1710 aa15.48■□□□□ 0.07
TPM1-229ENST00000561242 SPATA31D1Q6ZQQ2 1576 aa15.48■□□□□ 0.07
TPM1-229ENST00000561242 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
TPM1-229ENST00000561242 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
TPM1-229ENST00000561242 CCER1Q8TC90 406 aaPredicted RBP15.47■□□□□ 0.07
TPM1-229ENST00000561242 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.07
TPM1-229ENST00000561242 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
TPM1-229ENST00000561242 NUTM2DQ5VT03 806 aaPredicted RBP15.45■□□□□ 0.06
TPM1-229ENST00000561242 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
TPM1-229ENST00000561242 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
TPM1-229ENST00000561242 TMEM2Q9UHN6 1383 aa15.44■□□□□ 0.06
TPM1-229ENST00000561242 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
TPM1-229ENST00000561242 PTPRTO14522 1441 aa15.43■□□□□ 0.06
TPM1-229ENST00000561242 PLA2R1Q13018 1463 aa15.41■□□□□ 0.06
TPM1-229ENST00000561242 KDM2AQ9Y2K7 1162 aa15.41■□□□□ 0.06
TPM1-229ENST00000561242 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
TPM1-229ENST00000561242 MYO3AQ8NEV4 1616 aa15.39■□□□□ 0.05
TPM1-229ENST00000561242 DCAF11Q8TEB1 546 aa15.39■□□□□ 0.05
TPM1-229ENST00000561242 NPHP4O75161 1426 aaPredicted RBP15.39■□□□□ 0.05
TPM1-229ENST00000561242 LTKP29376 864 aa15.38■□□□□ 0.05
TPM1-229ENST00000561242 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
TPM1-229ENST00000561242 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
TPM1-229ENST00000561242 SCAF11Q99590 1463 aaKnown RBP15.38■□□□□ 0.05
TPM1-229ENST00000561242 ANKRD30BQ9BXX2 1392 aa15.37■□□□□ 0.05
TPM1-229ENST00000561242 CFAP65Q6ZU64 1925 aaKnown RBP15.37■□□□□ 0.05
TPM1-229ENST00000561242 E9PCH4 1651 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms