RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 DHX29Q7Z478 1369 aaKnown RBP8.48□□□□□ -1.05
ZEB1-219ENST00000560721 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
ZEB1-219ENST00000560721 A2MP01023 1474 aa8.48□□□□□ -1.05
ZEB1-219ENST00000560721 LMTK3Q96Q04 1460 aa8.48□□□□□ -1.05
ZEB1-219ENST00000560721 SETBP1Q9Y6X0 1596 aa8.48□□□□□ -1.05
ZEB1-219ENST00000560721 NAIPQ13075 1403 aa8.48□□□□□ -1.05
ZEB1-219ENST00000560721 PZPP20742 1482 aa8.47□□□□□ -1.05
ZEB1-219ENST00000560721 ADGRB3O60242 1522 aa8.47□□□□□ -1.05
ZEB1-219ENST00000560721 KIF1BO60333 1816 aa8.46□□□□□ -1.05
ZEB1-219ENST00000560721 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.05
ZEB1-219ENST00000560721 SLIT1O75093 1534 aa8.46□□□□□ -1.05
ZEB1-219ENST00000560721 MYOM2P54296 1465 aa8.46□□□□□ -1.05
ZEB1-219ENST00000560721 NOS1P29475 1434 aa8.46□□□□□ -1.06
ZEB1-219ENST00000560721 USP54Q70EL1 1684 aa8.46□□□□□ -1.06
ZEB1-219ENST00000560721 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
ZEB1-219ENST00000560721 NWD1Q149M9 1564 aa8.45□□□□□ -1.06
ZEB1-219ENST00000560721 UBR1Q8IWV7 1749 aa8.45□□□□□ -1.06
ZEB1-219ENST00000560721 EFCAB2Q5VUJ9 269 aa8.45□□□□□ -1.06
ZEB1-219ENST00000560721 EHMT2Q96KQ7 1210 aa8.45□□□□□ -1.06
ZEB1-219ENST00000560721 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
ZEB1-219ENST00000560721 TMEM131LA2VDJ0 1609 aa8.44□□□□□ -1.06
ZEB1-219ENST00000560721 PLA2R1Q13018 1463 aa8.44□□□□□ -1.06
ZEB1-219ENST00000560721 NLRP1Q9C000 1473 aa8.44□□□□□ -1.06
ZEB1-219ENST00000560721 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
ZEB1-219ENST00000560721 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
ZEB1-219ENST00000560721 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
ZEB1-219ENST00000560721 TRAPPC8Q9Y2L5 1435 aa8.42□□□□□ -1.06
ZEB1-219ENST00000560721 CLTCQ00610 1675 aaKnown RBP8.42□□□□□ -1.06
ZEB1-219ENST00000560721 SYNMO15061 1565 aa8.42□□□□□ -1.06
ZEB1-219ENST00000560721 NPM1P06748 294 aaKnown RBP eCLIP8.41□□□□□ -1.06
ZEB1-219ENST00000560721 PTPRKQ15262 1439 aa8.41□□□□□ -1.06
ZEB1-219ENST00000560721 TSPOAP1O95153 1857 aa8.41□□□□□ -1.06
ZEB1-219ENST00000560721 UHRF1BP1Q6BDS2 1440 aa8.41□□□□□ -1.06
ZEB1-219ENST00000560721 MED14O60244 1454 aa8.41□□□□□ -1.06
ZEB1-219ENST00000560721 SCAPERQ9BY12 1400 aa8.4□□□□□ -1.06
ZEB1-219ENST00000560721 PCGF6Q9BYE7 350 aa8.4□□□□□ -1.07
ZEB1-219ENST00000560721 COL17A1Q9UMD9 1497 aaPredicted RBP8.4□□□□□ -1.07
ZEB1-219ENST00000560721 SETD5Q9C0A6 1442 aa8.39□□□□□ -1.07
ZEB1-219ENST00000560721 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
ZEB1-219ENST00000560721 DLC1Q96QB1 1528 aa8.39□□□□□ -1.07
ZEB1-219ENST00000560721 LRRC7Q96NW7 1537 aa8.38□□□□□ -1.07
ZEB1-219ENST00000560721 IQGAP1P46940 1657 aa8.38□□□□□ -1.07
ZEB1-219ENST00000560721 CLTCL1P53675 1640 aa8.36□□□□□ -1.07
ZEB1-219ENST00000560721 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
ZEB1-219ENST00000560721 SETD1BQ9UPS6 1966 aaKnown RBP8.35□□□□□ -1.07
ZEB1-219ENST00000560721 TRPM1Q7Z4N2 1603 aa8.35□□□□□ -1.07
ZEB1-219ENST00000560721 XRN1Q8IZH2 1706 aaKnown RBP8.35□□□□□ -1.07
ZEB1-219ENST00000560721 ANKRD50Q9ULJ7 1429 aa8.35□□□□□ -1.07
ZEB1-219ENST00000560721 NRXN3Q9Y4C0 1643 aa8.34□□□□□ -1.07
ZEB1-219ENST00000560721 KANK4Q5T7N3 995 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-219ENST00000560721 ALKQ9UM73 1620 aa8.33□□□□□ -1.08
ZEB1-219ENST00000560721 NEXMIFQ5QGS0 1516 aa8.33□□□□□ -1.08
ZEB1-219ENST00000560721 NCOA3Q9Y6Q9 1424 aa8.33□□□□□ -1.08
ZEB1-219ENST00000560721 FBLN2P98095 1184 aa8.33□□□□□ -1.08
ZEB1-219ENST00000560721 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-219ENST00000560721 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
ZEB1-219ENST00000560721 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
ZEB1-219ENST00000560721 CPS1P31327 1500 aa8.32□□□□□ -1.08
ZEB1-219ENST00000560721 USP32Q8NFA0 1604 aa8.32□□□□□ -1.08
ZEB1-219ENST00000560721 SPATA31E1Q6ZUB1 1445 aa8.31□□□□□ -1.08
ZEB1-219ENST00000560721 KIF15Q9NS87 1388 aa8.31□□□□□ -1.08
ZEB1-219ENST00000560721 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
ZEB1-219ENST00000560721 CHD2O14647 1828 aaKnown RBP8.3□□□□□ -1.08
ZEB1-219ENST00000560721 TECPR2O15040 1411 aa8.28□□□□□ -1.08
ZEB1-219ENST00000560721 TOPAZ1Q8N9V7 1692 aa8.28□□□□□ -1.08
ZEB1-219ENST00000560721 CFDP1Q9UEE9 299 aaPredicted RBP8.28□□□□□ -1.08
ZEB1-219ENST00000560721 PIK3R4Q99570 1358 aa8.28□□□□□ -1.08
ZEB1-219ENST00000560721 GPRASP1Q5JY77 1395 aa8.27□□□□□ -1.08
ZEB1-219ENST00000560721 MST1RQ04912 1400 aa8.27□□□□□ -1.09
ZEB1-219ENST00000560721 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
ZEB1-219ENST00000560721 APLP2Q06481 763 aa8.27□□□□□ -1.09
ZEB1-219ENST00000560721 PPARGC1BQ86YN6 1023 aaKnown RBP8.27□□□□□ -1.09
ZEB1-219ENST00000560721 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
ZEB1-219ENST00000560721 ANKRD30BQ9BXX2 1392 aa8.26□□□□□ -1.09
ZEB1-219ENST00000560721 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
ZEB1-219ENST00000560721 STRCQ7RTU9 1775 aa8.25□□□□□ -1.09
ZEB1-219ENST00000560721 KANK1Q14678 1352 aa8.25□□□□□ -1.09
ZEB1-219ENST00000560721 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
ZEB1-219ENST00000560721 ARHGEF28Q8N1W1 1705 aaKnown RBP8.24□□□□□ -1.09
ZEB1-219ENST00000560721 RALGAPBQ86X10 1494 aa8.24□□□□□ -1.09
ZEB1-219ENST00000560721 ITSN1Q15811 1721 aa8.23□□□□□ -1.09
ZEB1-219ENST00000560721 PHRF1Q9P1Y6 1649 aaKnown RBP8.23□□□□□ -1.09
ZEB1-219ENST00000560721 ADGRB1O14514 1584 aa8.23□□□□□ -1.09
ZEB1-219ENST00000560721 ABCC6O95255 1503 aa8.23□□□□□ -1.09
ZEB1-219ENST00000560721 SBNO2Q9Y2G9 1366 aa8.23□□□□□ -1.09
ZEB1-219ENST00000560721 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
ZEB1-219ENST00000560721 NKTRP30414 1462 aaKnown RBP8.22□□□□□ -1.09
ZEB1-219ENST00000560721 ZEB1P37275 1124 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-219ENST00000560721 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
ZEB1-219ENST00000560721 DHX57Q6P158 1386 aaKnown RBP8.21□□□□□ -1.09
ZEB1-219ENST00000560721 PTPRMP28827 1452 aa8.21□□□□□ -1.1
ZEB1-219ENST00000560721 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.1
ZEB1-219ENST00000560721 SCAF1Q9H7N4 1312 aaKnown RBP8.2□□□□□ -1.1
ZEB1-219ENST00000560721 FAM69CQ0P6D2 419 aa8.2□□□□□ -1.1
ZEB1-219ENST00000560721 CYB5RLQ6IPT4 315 aa8.2□□□□□ -1.1
ZEB1-219ENST00000560721 KIF1AQ12756 1690 aa8.2□□□□□ -1.1
ZEB1-219ENST00000560721 PUS7Q96PZ0 661 aaKnown RBP8.2□□□□□ -1.1
ZEB1-219ENST00000560721 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
ZEB1-219ENST00000560721 PTCH1Q13635 1447 aa8.19□□□□□ -1.1
ZEB1-219ENST00000560721 CDC42BPGQ6DT37 1551 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms