RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.29■■■□□ 2.76
PBX1-218ENST00000560469 DEPDC5O75140 1603 aa32.28■■■□□ 2.76
PBX1-218ENST00000560469 TEX14Q8IWB6 1497 aa32.23■■■□□ 2.75
PBX1-218ENST00000560469 RICTORQ6R327 1708 aa32.22■■■□□ 2.75
PBX1-218ENST00000560469 DIEXFQ68CQ4 756 aaKnown RBP32.21■■■□□ 2.75
PBX1-218ENST00000560469 L3MBTL2Q969R5 705 aa32.21■■■□□ 2.75
PBX1-218ENST00000560469 A2MP01023 1474 aa32.21■■■□□ 2.75
PBX1-218ENST00000560469 PPRC1Q5VV67 1664 aaKnown RBP32.19■■■□□ 2.74
PBX1-218ENST00000560469 KANK1Q14678 1352 aa32.17■■■□□ 2.74
PBX1-218ENST00000560469 RAPGEF3O95398 923 aa32.16■■■□□ 2.74
PBX1-218ENST00000560469 VWDEQ8N2E2 1590 aa32.15■■■□□ 2.74
PBX1-218ENST00000560469 KIF3BO15066 747 aa32.15■■■□□ 2.74
PBX1-218ENST00000560469 TSPOAP1O95153 1857 aa32.15■■■□□ 2.74
PBX1-218ENST00000560469 KIF13AQ9H1H9 1805 aa32.15■■■□□ 2.74
PBX1-218ENST00000560469 PRDM15P57071 1507 aaPredicted RBP32.15■■■□□ 2.74
PBX1-218ENST00000560469 ABCA6Q8N139 1617 aa32.14■■■□□ 2.74
PBX1-218ENST00000560469 ATP10AO60312 1499 aa32.12■■■□□ 2.73
PBX1-218ENST00000560469 MROH1Q8NDA8 1641 aa32.1■■■□□ 2.73
PBX1-218ENST00000560469 RNF17Q9BXT8 1623 aaKnown RBP32.1■■■□□ 2.73
PBX1-218ENST00000560469 TET3O43151 1660 aa32.1■■■□□ 2.73
PBX1-218ENST00000560469 FRMPD1Q5SYB0 1578 aa32.1■■■□□ 2.73
PBX1-218ENST00000560469 BCORL1Q5H9F3 1711 aa32.1■■■□□ 2.73
PBX1-218ENST00000560469 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
PBX1-218ENST00000560469 ZMYM4Q5VZL5 1548 aa32.08■■■□□ 2.73
PBX1-218ENST00000560469 DIP2CQ9Y2E4 1556 aa32.07■■■□□ 2.72
PBX1-218ENST00000560469 PLA2R1Q13018 1463 aa32.07■■■□□ 2.72
PBX1-218ENST00000560469 E9PCH4 1651 aa32.05■■■□□ 2.72
PBX1-218ENST00000560469 LMTK2Q8IWU2 1503 aa32.01■■■□□ 2.71
PBX1-218ENST00000560469 PTPRTO14522 1441 aa31.96■■■□□ 2.71
PBX1-218ENST00000560469 NBPF8Q3BBV2 869 aa31.95■■■□□ 2.71
PBX1-218ENST00000560469 SPHKAPQ2M3C7 1700 aa31.95■■■□□ 2.71
PBX1-218ENST00000560469 YEATS2Q9ULM3 1422 aa31.95■■■□□ 2.71
PBX1-218ENST00000560469 TRPM2O94759 1503 aa31.95■■■□□ 2.7
PBX1-218ENST00000560469 UHRF1BP1Q6BDS2 1440 aa31.94■■■□□ 2.7
PBX1-218ENST00000560469 EFCAB6Q5THR3 1501 aa31.94■■■□□ 2.7
PBX1-218ENST00000560469 CEP152O94986 1710 aa31.9■■■□□ 2.7
PBX1-218ENST00000560469 GGT6Q6P531 493 aa31.87■■■□□ 2.69
PBX1-218ENST00000560469 REREQ9P2R6 1566 aa31.86■■■□□ 2.69
PBX1-218ENST00000560469 EIF4G2P78344 907 aaKnown RBP eCLIP31.85■■■□□ 2.69
PBX1-218ENST00000560469 DCAF11Q8TEB1 546 aa31.83■■■□□ 2.69
PBX1-218ENST00000560469 ABCC3O15438 1527 aa31.83■■■□□ 2.69
PBX1-218ENST00000560469 ZC3H13Q5T200 1668 aaKnown RBP31.8■■■□□ 2.68
PBX1-218ENST00000560469 CLTCL1P53675 1640 aa31.8■■■□□ 2.68
PBX1-218ENST00000560469 WASHC2CQ9Y4E1 1318 aa31.8■■■□□ 2.68
PBX1-218ENST00000560469 RALGAPBQ86X10 1494 aa31.79■■■□□ 2.68
PBX1-218ENST00000560469 HSPA5P11021 654 aaKnown RBP31.79■■■□□ 2.68
PBX1-218ENST00000560469 HIRIP3Q9BW71 556 aaPredicted RBP31.79■■■□□ 2.68
PBX1-218ENST00000560469 COL17A1Q9UMD9 1497 aaPredicted RBP31.79■■■□□ 2.68
PBX1-218ENST00000560469 SPATA31E1Q6ZUB1 1445 aa31.79■■■□□ 2.68
PBX1-218ENST00000560469 ZNF326Q5BKZ1 582 aaKnown RBP31.78■■■□□ 2.68
PBX1-218ENST00000560469 RGL3Q3MIN7 710 aa31.77■■■□□ 2.68
PBX1-218ENST00000560469 KDM2AQ9Y2K7 1162 aa31.77■■■□□ 2.68
PBX1-218ENST00000560469 AGLP35573 1532 aa31.77■■■□□ 2.68
PBX1-218ENST00000560469 NEURL4Q96JN8 1562 aa31.77■■■□□ 2.68
PBX1-218ENST00000560469 CAMSAP1Q5T5Y3 1602 aa31.76■■■□□ 2.68
PBX1-218ENST00000560469 NPATQ14207 1427 aa31.74■■■□□ 2.67
PBX1-218ENST00000560469 ARHGEF40Q8TER5 1519 aa31.73■■■□□ 2.67
PBX1-218ENST00000560469 PRAG1Q86YV5 1406 aa31.72■■■□□ 2.67
PBX1-218ENST00000560469 STAC3Q96MF2 364 aa31.7■■■□□ 2.67
PBX1-218ENST00000560469 ARHGAP31Q2M1Z3 1444 aa31.7■■■□□ 2.66
PBX1-218ENST00000560469 CNTLNQ9NXG0 1405 aa31.69■■■□□ 2.66
PBX1-218ENST00000560469 KIF1BO60333 1816 aa31.67■■■□□ 2.66
PBX1-218ENST00000560469 TRPM1Q7Z4N2 1603 aa31.67■■■□□ 2.66
PBX1-218ENST00000560469 PPP6R1Q9UPN7 881 aa31.67■■■□□ 2.66
PBX1-218ENST00000560469 MIER1Q8N108 512 aa31.65■■■□□ 2.66
PBX1-218ENST00000560469 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
PBX1-218ENST00000560469 UGGT1Q9NYU2 1555 aa31.62■■■□□ 2.65
PBX1-218ENST00000560469 USP47Q96K76 1375 aa31.62■■■□□ 2.65
PBX1-218ENST00000560469 DDX10Q13206 875 aaKnown RBP31.62■■■□□ 2.65
PBX1-218ENST00000560469 NOS1P29475 1434 aa31.62■■■□□ 2.65
PBX1-218ENST00000560469 CARD11Q9BXL7 1154 aa31.61■■■□□ 2.65
PBX1-218ENST00000560469 ROCK2O75116 1388 aaKnown RBP31.59■■■□□ 2.65
PBX1-218ENST00000560469 SIGLEC1Q9BZZ2 1709 aa31.57■■■□□ 2.65
PBX1-218ENST00000560469 LAMC1P11047 1609 aa31.57■■■□□ 2.64
PBX1-218ENST00000560469 CFAP65Q6ZU64 1925 aaKnown RBP31.57■■■□□ 2.64
PBX1-218ENST00000560469 TRHP20396 242 aaPredicted RBP31.56■■■□□ 2.64
PBX1-218ENST00000560469 GPRASP1Q5JY77 1395 aa31.56■■■□□ 2.64
PBX1-218ENST00000560469 MADDQ8WXG6 1647 aa31.55■■■□□ 2.64
PBX1-218ENST00000560469 ADGRB3O60242 1522 aa31.55■■■□□ 2.64
PBX1-218ENST00000560469 POLR1AO95602 1720 aaPredicted RBP31.54■■■□□ 2.64
PBX1-218ENST00000560469 WASHC2AQ641Q2 1341 aa31.53■■■□□ 2.64
PBX1-218ENST00000560469 PIK3C2BO00750 1634 aa31.53■■■□□ 2.64
PBX1-218ENST00000560469 MROH2AA6NES4 1674 aa31.51■■■□□ 2.64
PBX1-218ENST00000560469 SYNMO15061 1565 aa31.51■■■□□ 2.64
PBX1-218ENST00000560469 MYOM2P54296 1465 aa31.5■■■□□ 2.63
PBX1-218ENST00000560469 PREX1Q8TCU6 1659 aa31.5■■■□□ 2.63
PBX1-218ENST00000560469 IFT172Q9UG01 1749 aa31.5■■■□□ 2.63
PBX1-218ENST00000560469 CCDC7Q96M83 1385 aa31.49■■■□□ 2.63
PBX1-218ENST00000560469 CLTCQ00610 1675 aaKnown RBP31.46■■■□□ 2.63
PBX1-218ENST00000560469 NBPF1Q3BBV0 1214 aa31.45■■■□□ 2.63
PBX1-218ENST00000560469 SLC52A1Q9NWF4 448 aa31.45■■■□□ 2.63
PBX1-218ENST00000560469 KIAA1210Q9ULL0 1709 aa31.44■■■□□ 2.62
PBX1-218ENST00000560469 RPGRIP1LQ68CZ1 1315 aa31.43■■■□□ 2.62
PBX1-218ENST00000560469 C11orf95C9JLR9 678 aaPredicted RBP31.43■■■□□ 2.62
PBX1-218ENST00000560469 ARID4BQ4LE39 1312 aaPredicted RBP31.42■■■□□ 2.62
PBX1-218ENST00000560469 CHGAP10645 457 aaKnown RBP31.42■■■□□ 2.62
PBX1-218ENST00000560469 ERVK-7P63135 1459 aa31.4■■■□□ 2.62
PBX1-218ENST00000560469 KIF7Q2M1P5 1343 aa31.39■■■□□ 2.62
PBX1-218ENST00000560469 NRXN1Q9ULB1 1477 aa31.39■■■□□ 2.61
PBX1-218ENST00000560469 PPLO60437 1756 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms