RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 DEPDC5O75140 1603 aa20.89■□□□□ 0.93
ZEB1-218ENST00000560196 FOXD1Q16676 465 aa20.88■□□□□ 0.93
ZEB1-218ENST00000560196 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
ZEB1-218ENST00000560196 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
ZEB1-218ENST00000560196 A2MP01023 1474 aa20.86■□□□□ 0.93
ZEB1-218ENST00000560196 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
ZEB1-218ENST00000560196 MYT1LQ9UL68 1186 aa20.84■□□□□ 0.93
ZEB1-218ENST00000560196 VWDEQ8N2E2 1590 aa20.84■□□□□ 0.93
ZEB1-218ENST00000560196 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
ZEB1-218ENST00000560196 BCORL1Q5H9F3 1711 aa20.82■□□□□ 0.92
ZEB1-218ENST00000560196 FRMPD1Q5SYB0 1578 aa20.82■□□□□ 0.92
ZEB1-218ENST00000560196 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
ZEB1-218ENST00000560196 PRDM15P57071 1507 aaPredicted RBP20.81■□□□□ 0.92
ZEB1-218ENST00000560196 ABCA6Q8N139 1617 aa20.81■□□□□ 0.92
ZEB1-218ENST00000560196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
ZEB1-218ENST00000560196 KANK1Q14678 1352 aa20.8■□□□□ 0.92
ZEB1-218ENST00000560196 ATP10AO60312 1499 aa20.8■□□□□ 0.92
ZEB1-218ENST00000560196 RNF17Q9BXT8 1623 aaKnown RBP20.79■□□□□ 0.92
ZEB1-218ENST00000560196 MROH1Q8NDA8 1641 aa20.78■□□□□ 0.92
ZEB1-218ENST00000560196 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
ZEB1-218ENST00000560196 KIF3BO15066 747 aa20.77■□□□□ 0.92
ZEB1-218ENST00000560196 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
ZEB1-218ENST00000560196 LMTK2Q8IWU2 1503 aa20.75■□□□□ 0.91
ZEB1-218ENST00000560196 TET3O43151 1660 aa20.75■□□□□ 0.91
ZEB1-218ENST00000560196 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
ZEB1-218ENST00000560196 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
ZEB1-218ENST00000560196 REREQ9P2R6 1566 aa20.7■□□□□ 0.9
ZEB1-218ENST00000560196 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.9
ZEB1-218ENST00000560196 PTPRTO14522 1441 aa20.7■□□□□ 0.9
ZEB1-218ENST00000560196 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
ZEB1-218ENST00000560196 E9PCH4 1651 aa20.69■□□□□ 0.9
ZEB1-218ENST00000560196 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
ZEB1-218ENST00000560196 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
ZEB1-218ENST00000560196 EFCAB6Q5THR3 1501 aa20.66■□□□□ 0.9
ZEB1-218ENST00000560196 TRPM2O94759 1503 aa20.65■□□□□ 0.9
ZEB1-218ENST00000560196 AGLP35573 1532 aa20.64■□□□□ 0.9
ZEB1-218ENST00000560196 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
ZEB1-218ENST00000560196 UHRF1BP1Q6BDS2 1440 aa20.63■□□□□ 0.89
ZEB1-218ENST00000560196 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
ZEB1-218ENST00000560196 ABCC3O15438 1527 aa20.61■□□□□ 0.89
ZEB1-218ENST00000560196 ARHGEF40Q8TER5 1519 aa20.6■□□□□ 0.89
ZEB1-218ENST00000560196 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
ZEB1-218ENST00000560196 DIEXFQ68CQ4 756 aaKnown RBP20.59■□□□□ 0.89
ZEB1-218ENST00000560196 CEP152O94986 1710 aa20.58■□□□□ 0.89
ZEB1-218ENST00000560196 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.89
ZEB1-218ENST00000560196 NBPF8Q3BBV2 869 aa20.58■□□□□ 0.89
ZEB1-218ENST00000560196 ARHGAP31Q2M1Z3 1444 aa20.57■□□□□ 0.88
ZEB1-218ENST00000560196 GGT6Q6P531 493 aa20.57■□□□□ 0.88
ZEB1-218ENST00000560196 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
ZEB1-218ENST00000560196 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
ZEB1-218ENST00000560196 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
ZEB1-218ENST00000560196 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
ZEB1-218ENST00000560196 NPATQ14207 1427 aa20.53■□□□□ 0.88
ZEB1-218ENST00000560196 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
ZEB1-218ENST00000560196 CAMSAP1Q5T5Y3 1602 aa20.53■□□□□ 0.88
ZEB1-218ENST00000560196 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
ZEB1-218ENST00000560196 RALGAPBQ86X10 1494 aa20.52■□□□□ 0.88
ZEB1-218ENST00000560196 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
ZEB1-218ENST00000560196 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
ZEB1-218ENST00000560196 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
ZEB1-218ENST00000560196 NOS1P29475 1434 aa20.49■□□□□ 0.87
ZEB1-218ENST00000560196 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
ZEB1-218ENST00000560196 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
ZEB1-218ENST00000560196 TRHP20396 242 aaPredicted RBP20.45■□□□□ 0.86
ZEB1-218ENST00000560196 RGL3Q3MIN7 710 aa20.44■□□□□ 0.86
ZEB1-218ENST00000560196 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
ZEB1-218ENST00000560196 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
ZEB1-218ENST00000560196 KIF1BO60333 1816 aa20.41■□□□□ 0.86
ZEB1-218ENST00000560196 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
ZEB1-218ENST00000560196 ADGRB3O60242 1522 aa20.41■□□□□ 0.86
ZEB1-218ENST00000560196 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
ZEB1-218ENST00000560196 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
ZEB1-218ENST00000560196 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
ZEB1-218ENST00000560196 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
ZEB1-218ENST00000560196 SYNMO15061 1565 aa20.39■□□□□ 0.85
ZEB1-218ENST00000560196 LAMC1P11047 1609 aa20.38■□□□□ 0.85
ZEB1-218ENST00000560196 MYOM2P54296 1465 aa20.38■□□□□ 0.85
ZEB1-218ENST00000560196 USP47Q96K76 1375 aa20.36■□□□□ 0.85
ZEB1-218ENST00000560196 PREX1Q8TCU6 1659 aa20.36■□□□□ 0.85
ZEB1-218ENST00000560196 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
ZEB1-218ENST00000560196 SLC52A1Q9NWF4 448 aa20.36■□□□□ 0.85
ZEB1-218ENST00000560196 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
ZEB1-218ENST00000560196 HIRIP3Q9BW71 556 aaPredicted RBP20.35■□□□□ 0.85
ZEB1-218ENST00000560196 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
ZEB1-218ENST00000560196 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
ZEB1-218ENST00000560196 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
ZEB1-218ENST00000560196 MROH2AA6NES4 1674 aa20.34■□□□□ 0.85
ZEB1-218ENST00000560196 IFT172Q9UG01 1749 aa20.33■□□□□ 0.85
ZEB1-218ENST00000560196 CLTCQ00610 1675 aaKnown RBP20.33■□□□□ 0.85
ZEB1-218ENST00000560196 NRXN1Q9ULB1 1477 aa20.32■□□□□ 0.84
ZEB1-218ENST00000560196 SPATA31D1Q6ZQQ2 1576 aa20.31■□□□□ 0.84
ZEB1-218ENST00000560196 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
ZEB1-218ENST00000560196 KIAA1210Q9ULL0 1709 aa20.3■□□□□ 0.84
ZEB1-218ENST00000560196 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.84
ZEB1-218ENST00000560196 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
ZEB1-218ENST00000560196 CCDC7Q96M83 1385 aa20.27■□□□□ 0.84
ZEB1-218ENST00000560196 IDI1Q13907 227 aa20.27■□□□□ 0.84
ZEB1-218ENST00000560196 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.83
ZEB1-218ENST00000560196 PPLO60437 1756 aa20.26■□□□□ 0.83
ZEB1-218ENST00000560196 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms