RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 BHMG1C9JSJ3 638 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P26-201ENST00000560051 DCAF8L2P0C7V8 631 aa7.6□□□□□ -1.19
HMGB3P26-201ENST00000560051 HAP1P54257 671 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P26-201ENST00000560051 NCKAP5LQ9HCH0 1330 aa7.59□□□□□ -1.19
HMGB3P26-201ENST00000560051 IFFO2Q5TF58 517 aa7.59□□□□□ -1.19
HMGB3P26-201ENST00000560051 ADAM33Q9BZ11 813 aa7.58□□□□□ -1.2
HMGB3P26-201ENST00000560051 ANKK1Q8NFD2 765 aa7.57□□□□□ -1.2
HMGB3P26-201ENST00000560051 PPP1R3GB7ZBB8 358 aa7.56□□□□□ -1.2
HMGB3P26-201ENST00000560051 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P26-201ENST00000560051 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P26-201ENST00000560051 FBXW7Q969H0 707 aa7.55□□□□□ -1.2
HMGB3P26-201ENST00000560051 RABGEF1Q9UJ41 708 aa7.55□□□□□ -1.2
HMGB3P26-201ENST00000560051 MFSD10Q14728 455 aa7.54□□□□□ -1.2
HMGB3P26-201ENST00000560051 TYW1BQ6NUM6 668 aa7.54□□□□□ -1.2
HMGB3P26-201ENST00000560051 A0A0G2JS52 829 aa7.53□□□□□ -1.2
HMGB3P26-201ENST00000560051 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
HMGB3P26-201ENST00000560051 PHF14O94880 888 aa7.52□□□□□ -1.21
HMGB3P26-201ENST00000560051 PCDHGA10Q9Y5H3 936 aa7.52□□□□□ -1.21
HMGB3P26-201ENST00000560051 NYAP1Q6ZVC0 841 aa7.51□□□□□ -1.21
HMGB3P26-201ENST00000560051 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
HMGB3P26-201ENST00000560051 PROX2Q3B8N5 592 aa7.5□□□□□ -1.21
HMGB3P26-201ENST00000560051 EPAS1Q99814 870 aa7.5□□□□□ -1.21
HMGB3P26-201ENST00000560051 EMILIN3Q9NT22 766 aa7.5□□□□□ -1.21
HMGB3P26-201ENST00000560051 ONECUT3O60422 494 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P26-201ENST00000560051 VSIG10Q8N0Z9 540 aa7.48□□□□□ -1.21
HMGB3P26-201ENST00000560051 KIAA1468Q9P260 1216 aa7.48□□□□□ -1.21
HMGB3P26-201ENST00000560051 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
HMGB3P26-201ENST00000560051 COL9A1P20849 921 aa7.47□□□□□ -1.21
HMGB3P26-201ENST00000560051 ZFRQ96KR1 1074 aaKnown RBP7.47□□□□□ -1.21
HMGB3P26-201ENST00000560051 BCAMP50895 628 aa7.46□□□□□ -1.22
HMGB3P26-201ENST00000560051 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
HMGB3P26-201ENST00000560051 ITGBL1O95965 494 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P26-201ENST00000560051 KCNC4Q03721 635 aa7.45□□□□□ -1.22
HMGB3P26-201ENST00000560051 FAM98CQ17RN3 349 aaKnown RBP7.43□□□□□ -1.22
HMGB3P26-201ENST00000560051 RBM33Q96EV2 1170 aaKnown RBP7.43□□□□□ -1.22
HMGB3P26-201ENST00000560051 LRCH3Q96II8 777 aa7.43□□□□□ -1.22
HMGB3P26-201ENST00000560051 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P26-201ENST00000560051 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P26-201ENST00000560051 TRIM6-TRIM34B2RNG4 842 aa7.42□□□□□ -1.22
HMGB3P26-201ENST00000560051 DPYSL4O14531 572 aa7.42□□□□□ -1.22
HMGB3P26-201ENST00000560051 PACS2Q86VP3 889 aa7.42□□□□□ -1.22
HMGB3P26-201ENST00000560051 WBP1LQ9NX94 342 aa7.42□□□□□ -1.22
HMGB3P26-201ENST00000560051 EIF5BO60841 1220 aaKnown RBP7.41□□□□□ -1.22
HMGB3P26-201ENST00000560051 CAMK2BQ13554 666 aa7.41□□□□□ -1.22
HMGB3P26-201ENST00000560051 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
HMGB3P26-201ENST00000560051 Q6ZNB5 142 aa7.4□□□□□ -1.22
HMGB3P26-201ENST00000560051 CADPS2Q86UW7 1296 aa7.4□□□□□ -1.22
HMGB3P26-201ENST00000560051 DDX12PQ92771 950 aa7.4□□□□□ -1.22
HMGB3P26-201ENST00000560051 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
HMGB3P26-201ENST00000560051 MAP3K7O43318 606 aa7.39□□□□□ -1.23
HMGB3P26-201ENST00000560051 PODXL2Q9NZ53 605 aa7.39□□□□□ -1.23
HMGB3P26-201ENST00000560051 PPP4CP60510 307 aa7.38□□□□□ -1.23
HMGB3P26-201ENST00000560051 NBR1Q14596 966 aa7.38□□□□□ -1.23
HMGB3P26-201ENST00000560051 LAPTM4AQ15012 233 aa7.37□□□□□ -1.23
HMGB3P26-201ENST00000560051 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
HMGB3P26-201ENST00000560051 HDGFP51858 240 aaKnown RBP7.36□□□□□ -1.23
HMGB3P26-201ENST00000560051 TMEM132AQ24JP5 1023 aa7.36□□□□□ -1.23
HMGB3P26-201ENST00000560051 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P26-201ENST00000560051 EN1Q05925 392 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P26-201ENST00000560051 CERKQ8TCT0 537 aa7.34□□□□□ -1.23
HMGB3P26-201ENST00000560051 BBXQ8WY36 941 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P26-201ENST00000560051 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
HMGB3P26-201ENST00000560051 PDIA6Q15084 440 aa7.31□□□□□ -1.24
HMGB3P26-201ENST00000560051 TSR1Q2NL82 804 aaKnown RBP7.31□□□□□ -1.24
HMGB3P26-201ENST00000560051 CDCA7LQ96GN5 454 aa7.31□□□□□ -1.24
HMGB3P26-201ENST00000560051 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
HMGB3P26-201ENST00000560051 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
HMGB3P26-201ENST00000560051 NBPF26B4DH59 902 aa7.3□□□□□ -1.24
HMGB3P26-201ENST00000560051 GFRA3O60609 400 aa7.3□□□□□ -1.24
HMGB3P26-201ENST00000560051 PRSS12P56730 875 aa7.3□□□□□ -1.24
HMGB3P26-201ENST00000560051 SAMD7Q7Z3H4 446 aa7.3□□□□□ -1.24
HMGB3P26-201ENST00000560051 NECTIN2Q92692 538 aa7.3□□□□□ -1.24
HMGB3P26-201ENST00000560051 GRXCR2A6NFK2 248 aa7.29□□□□□ -1.24
HMGB3P26-201ENST00000560051 C14orf37Q86TY3 774 aa7.29□□□□□ -1.24
HMGB3P26-201ENST00000560051 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
HMGB3P26-201ENST00000560051 SMAPO00193 183 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 RNF40O75150 1001 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 SLC4A3P48751 1232 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 E2F4Q16254 413 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 IL21Q9HBE4 155 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 PNMA3Q9UL41 463 aa7.28□□□□□ -1.24
HMGB3P26-201ENST00000560051 TATDN2Q93075 761 aa7.27□□□□□ -1.25
HMGB3P26-201ENST00000560051 TRAF7Q6Q0C0 670 aa7.26□□□□□ -1.25
HMGB3P26-201ENST00000560051 PRKD2Q9BZL6 878 aa7.26□□□□□ -1.25
HMGB3P26-201ENST00000560051 GGCXP38435 758 aa7.25□□□□□ -1.25
HMGB3P26-201ENST00000560051 TJAP1Q5JTD0 557 aa7.25□□□□□ -1.25
HMGB3P26-201ENST00000560051 MTRQ99707 1265 aa7.25□□□□□ -1.25
HMGB3P26-201ENST00000560051 V9GY48 417 aaPredicted RBP7.24□□□□□ -1.25
HMGB3P26-201ENST00000560051 PPP1R18Q6NYC8 613 aa7.23□□□□□ -1.25
HMGB3P26-201ENST00000560051 NUDT18Q6ZVK8 323 aa7.23□□□□□ -1.25
HMGB3P26-201ENST00000560051 NPM2Q86SE8 214 aaKnown RBP7.23□□□□□ -1.25
HMGB3P26-201ENST00000560051 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.23□□□□□ -1.25
HMGB3P26-201ENST00000560051 RBM27Q9P2N5 1060 aaKnown RBP7.22□□□□□ -1.25
HMGB3P26-201ENST00000560051 NRG2O14511 850 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P26-201ENST00000560051 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
HMGB3P26-201ENST00000560051 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
HMGB3P26-201ENST00000560051 ARIH1Q9Y4X5 557 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P26-201ENST00000560051 CFAP44Q96MT7 982 aa7.19□□□□□ -1.26
HMGB3P26-201ENST00000560051 PRR14Q9BWN1 585 aa7.19□□□□□ -1.26
HMGB3P26-201ENST00000560051 ZNF516Q92618 1163 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms